Gene CNK00880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00880 
Symbol 
ID3254536 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp276461 
End bp278512 
Gene Length2052 bp 
Protein Length401 aa 
Translation table 
GC content50% 
IMG OID638253578 
Productconserved hypothetical protein 
Protein accessionXP_567651 
Protein GI58260482 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGAGCTCCTC TCTCAGGCCC CTCTTGTCCG CCGAAGAGCA AGGCAGATAG CCTCAACGTG 
CTCACTCGTA AACCATGACC CCGCATGTGA TCAGGGTGCC CCACAGCCCC GCATTTCACT
CCTCTGCAAA GTGCTCCTCG CTGCTCTCCA TGCCTGTCGG CTTCTAGCAA AAGTTTCGAT
GCTCAATCAT TGCGGGATCA GGCGGGTAGT ATGATGCGCA GTGTGGGATA ACTGTCAATT
GTCAACGAGC TCCTCTCAGA TAGCCACAGC TCGTGACGGA AACTGAGCAT ACAACAACAT
GTCAACTTTC CAGCGATGAC AAGTCCTCCA AAGTATCAAC TGGTATATAA GTCGATCAGT
TGGAGCGATC TTCTCTATTG TCACAGCTTC AGTCACTTAC ATCACATCTA CAACTACCCA
GCACAAGCTT CAAATCATCA AACATGACCG CGACACCTGC TTTCAACCCT CCTGCCGCCA
ACCTTCCTGG CAAGCCCTAC GTCCGACCTT GGATTCCACC CCCTGTCACT AAGGAGACCC
ACAACTTCGC CAAACTTAGC AGTATCAAAT TGTCCTTGAT GGACTCTGAT GACCCCGAAG
TCGTCGATAA CCTCGTGCAA CAAGTGAAGG GGGCGATTCG GGAGGATGGG TTCCTGTTCC
TTGAGGACTA CGGTGTATCA CTCGAACAAG TGAGATTTAG TTTGGTGCGC TTACCACTGG
TTCAAAGCTT ACTGCCTGCA CTGTAGCTTC ACCGACAGTT TGCACTTGCT CAATATCTCT
ATGACAACAT TGCAGAAGAA GACAAGGAAG CACTCCTCTT CCACCCTGAC ACTGGTCGTT
GGGCTGGCTA CAAACACCCC TACGGTTTCA AGGTGAGCAT ATATCATTTG TTTTATCTTG
CCTATGTTAT ATTGAACAGA ACTGAATAAC TTTGATTTAG CGTCACAAGG GCACCAAGGA
CGGTATCGAA CAATTTAACT GGTACACCGC TGAGTGGGAC GACATCAACC GCGTGCCCAA
GTGTCTCCAC CCCTTCATGG ACGAAATCAG GGCTTTCGCT GAGGTATGTC TAGTACCTTC
GCGCCCTGTA TTGCTCATCT TACTAATGTG CCGTGGTTAG TATCTCACCG GCTCGGTTAA
CCGTCGGCTT CTCACTCTCT TCTCCCGAGT CCTCGAGCTC GACGATGACT ACCTCTGGAA
CAATGTCCAA TCCCACGGCT CTCCCACCGG CGAAGGCTAC TTCCGCCATG CTCTCTTCCG
ACCAGTCGAA AAATCCACTG ACGAAGCTTC TAAGGGTCTT CGTATGCACG GCCATACTGA
CTTTGGTCTC ACCACTTTGC TCTTCTCTGT ACCCGTCTCT TGTCTCCAAA TTTGGGGTAA
AGATGAACAG TGGTATTATG TGCCTTACAA CCCTGGGTCC TTGGTTATCA ATATTGGTGA
AACATTGGAA ATTGTCTCTG GTGGACACTT CAAGGCTACC AGACACAGGG TCTATAGACC
TCCTGCCGTA GGTCTTGCCT CTTATCGTGA CATCTTTCCT TCGCTGAGTG GTGTTCTCTA
GGACCAACTC CAGACCGAAC GACTTTCTCT CGTCCTGTTC AACAGTAGTG TTGGTGATCT
TCGAATGACT CCTGCCGCTG AGTCACCCCT AATCAAGCGG GAGGGTTGCA TCGAAGAGCA
GGGTGTGTAC AAGGAGTTTA AGAGGGTGAT GGACCTCGGT GTGCCTGTCA GTGTTCTTCT
TCCTGCTAGT TTTGAGGTAC GGCAGAAGCT GATATGATTA TGACAGGTGC CCACCAACCG
ACAATGGCGA GAAATTCAGA TTGCAGAGGC CACCGACCCC ACGGACACGG AGCGTAACAG
GGTTGGCGCT GATCAGGTCA TCGTCAATGG CAAACTCATG CAGACCAGGG AGTACATGGG
TGTTAAGGTC CTTTTGCCTG TGTAAAGATA TGAATGATTG GGCAATGTAT TTGTATCTTT
AGTTTGTCAC TATGAAAAGG TTGTGGAATA GGAATAATTC CTGTCTTTGT GTTCTATGCA
TGTTTGTCTC TT
 
Protein sequence
MTATPAFNPP AANLPGKPYV RPWIPPPVTK ETHNFAKLSS IKLSLMDSDD PEVVDNLVQQ 
VKGAIREDGF LFLEDYGVSL EQLHRQFALA QYLYDNIAEE DKEALLFHPD TGRWAGYKHP
YGFKRHKGTK DGIEQFNWYT AEWDDINRVP KCLHPFMDEI RAFAEYLTGS VNRRLLTLFS
RVLELDDDYL WNNVQSHGSP TGEGYFRHAL FRPVEKSTDE ASKGLRMHGH TDFGLTTLLF
SVPVSCLQIW GKDEQWYYVP YNPGSLVINI GETLEIVSGG HFKATRHRVY RPPADQLQTE
RLSLVLFNSS VGDLRMTPAA ESPLIKREGC IEEQGVYKEF KRVMDLGVPV PTNRQWREIQ
IAEATDPTDT ERNRVGADQV IVNGKLMQTR EYMGVKVLLP V