Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK00880 |
Symbol | |
ID | 3254536 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | + |
Start bp | 276461 |
End bp | 278512 |
Gene Length | 2052 bp |
Protein Length | 401 aa |
Translation table | |
GC content | 50% |
IMG OID | 638253578 |
Product | conserved hypothetical protein |
Protein accession | XP_567651 |
Protein GI | 58260482 |
COG category | [R] General function prediction only |
COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGAGCTCCTC TCTCAGGCCC CTCTTGTCCG CCGAAGAGCA AGGCAGATAG CCTCAACGTG CTCACTCGTA AACCATGACC CCGCATGTGA TCAGGGTGCC CCACAGCCCC GCATTTCACT CCTCTGCAAA GTGCTCCTCG CTGCTCTCCA TGCCTGTCGG CTTCTAGCAA AAGTTTCGAT GCTCAATCAT TGCGGGATCA GGCGGGTAGT ATGATGCGCA GTGTGGGATA ACTGTCAATT GTCAACGAGC TCCTCTCAGA TAGCCACAGC TCGTGACGGA AACTGAGCAT ACAACAACAT GTCAACTTTC CAGCGATGAC AAGTCCTCCA AAGTATCAAC TGGTATATAA GTCGATCAGT TGGAGCGATC TTCTCTATTG TCACAGCTTC AGTCACTTAC ATCACATCTA CAACTACCCA GCACAAGCTT CAAATCATCA AACATGACCG CGACACCTGC TTTCAACCCT CCTGCCGCCA ACCTTCCTGG CAAGCCCTAC GTCCGACCTT GGATTCCACC CCCTGTCACT AAGGAGACCC ACAACTTCGC CAAACTTAGC AGTATCAAAT TGTCCTTGAT GGACTCTGAT GACCCCGAAG TCGTCGATAA CCTCGTGCAA CAAGTGAAGG GGGCGATTCG GGAGGATGGG TTCCTGTTCC TTGAGGACTA CGGTGTATCA CTCGAACAAG TGAGATTTAG TTTGGTGCGC TTACCACTGG TTCAAAGCTT ACTGCCTGCA CTGTAGCTTC ACCGACAGTT TGCACTTGCT CAATATCTCT ATGACAACAT TGCAGAAGAA GACAAGGAAG CACTCCTCTT CCACCCTGAC ACTGGTCGTT GGGCTGGCTA CAAACACCCC TACGGTTTCA AGGTGAGCAT ATATCATTTG TTTTATCTTG CCTATGTTAT ATTGAACAGA ACTGAATAAC TTTGATTTAG CGTCACAAGG GCACCAAGGA CGGTATCGAA CAATTTAACT GGTACACCGC TGAGTGGGAC GACATCAACC GCGTGCCCAA GTGTCTCCAC CCCTTCATGG ACGAAATCAG GGCTTTCGCT GAGGTATGTC TAGTACCTTC GCGCCCTGTA TTGCTCATCT TACTAATGTG CCGTGGTTAG TATCTCACCG GCTCGGTTAA CCGTCGGCTT CTCACTCTCT TCTCCCGAGT CCTCGAGCTC GACGATGACT ACCTCTGGAA CAATGTCCAA TCCCACGGCT CTCCCACCGG CGAAGGCTAC TTCCGCCATG CTCTCTTCCG ACCAGTCGAA AAATCCACTG ACGAAGCTTC TAAGGGTCTT CGTATGCACG GCCATACTGA CTTTGGTCTC ACCACTTTGC TCTTCTCTGT ACCCGTCTCT TGTCTCCAAA TTTGGGGTAA AGATGAACAG TGGTATTATG TGCCTTACAA CCCTGGGTCC TTGGTTATCA ATATTGGTGA AACATTGGAA ATTGTCTCTG GTGGACACTT CAAGGCTACC AGACACAGGG TCTATAGACC TCCTGCCGTA GGTCTTGCCT CTTATCGTGA CATCTTTCCT TCGCTGAGTG GTGTTCTCTA GGACCAACTC CAGACCGAAC GACTTTCTCT CGTCCTGTTC AACAGTAGTG TTGGTGATCT TCGAATGACT CCTGCCGCTG AGTCACCCCT AATCAAGCGG GAGGGTTGCA TCGAAGAGCA GGGTGTGTAC AAGGAGTTTA AGAGGGTGAT GGACCTCGGT GTGCCTGTCA GTGTTCTTCT TCCTGCTAGT TTTGAGGTAC GGCAGAAGCT GATATGATTA TGACAGGTGC CCACCAACCG ACAATGGCGA GAAATTCAGA TTGCAGAGGC CACCGACCCC ACGGACACGG AGCGTAACAG GGTTGGCGCT GATCAGGTCA TCGTCAATGG CAAACTCATG CAGACCAGGG AGTACATGGG TGTTAAGGTC CTTTTGCCTG TGTAAAGATA TGAATGATTG GGCAATGTAT TTGTATCTTT AGTTTGTCAC TATGAAAAGG TTGTGGAATA GGAATAATTC CTGTCTTTGT GTTCTATGCA TGTTTGTCTC TT
|
Protein sequence | MTATPAFNPP AANLPGKPYV RPWIPPPVTK ETHNFAKLSS IKLSLMDSDD PEVVDNLVQQ VKGAIREDGF LFLEDYGVSL EQLHRQFALA QYLYDNIAEE DKEALLFHPD TGRWAGYKHP YGFKRHKGTK DGIEQFNWYT AEWDDINRVP KCLHPFMDEI RAFAEYLTGS VNRRLLTLFS RVLELDDDYL WNNVQSHGSP TGEGYFRHAL FRPVEKSTDE ASKGLRMHGH TDFGLTTLLF SVPVSCLQIW GKDEQWYYVP YNPGSLVINI GETLEIVSGG HFKATRHRVY RPPADQLQTE RLSLVLFNSS VGDLRMTPAA ESPLIKREGC IEEQGVYKEF KRVMDLGVPV PTNRQWREIQ IAEATDPTDT ERNRVGADQV IVNGKLMQTR EYMGVKVLLP V
|
| |