Gene CNK00870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00870 
Symbol 
ID3254648 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp275286 
End bp275912 
Gene Length627 bp 
Protein Length117 aa 
Translation table 
GC content48% 
IMG OID638253577 
Productconserved hypothetical protein 
Protein accessionXP_567650 
Protein GI58260480 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGAG AACTCATCAG CTCTGCCGAA TTCCCTCCCA AGCCTCACAA CTGTTAGTAT 
TCTTAACGCC ATCATCTGTA TTCATACATC GCTGACCGTG ATCAAAAGGC CCGGCCGTTA
AGGTCCCCGG TCTTGTCTTT TGCGCCGGCC AAACCGCGAC AGGCGAGATC AAGCAGGCCA
CTGTAAGTCC TTTTCATTTC TTTGTAGGGA GCTATGGAAC ACGGGATATC TGATTCATTG
TAAAAATTCA TATAGCACAC CGTCTTGTCC AACCTCCAGA AAGTCCTTGA GCTCGCGGGT
TCATCACTCG ACAAGGTCGT CAAGTACAAC GTCTACCTCA AGGACATGAA GGACTTTGCG
GCCATGAATG AGGTTTACAT TGCTGTAAGC CGGCACCTGT CCCACATTGC ATCATTATTA
GGCTGATTGG CCCTTTTTTT TCTAGTTCCT TCCTCCCAAT CCTCCTTCTA GAACCTGTAT
CCAGGCCGGC GACCTCCCTG GAGAGGGTAC TATCATTGAG ATTGAGTGCA TTGCCCAGGC
ATAAGCGAGA GATAGAAGCA ATTGTAACTT AGGAGGAAAG AAGCAGGGGT TGGGATTGTA
GCATTCATTC CATCGTACTT GAAGGTA
 
Protein sequence
MSRELISSAE FPPKPHNCPA VKVPGLVFCA GQTATGEIKQ ATHTVLSNLQ KVLELAGSSL 
DKVVKYNVYL KDMKDFAAMN EVYIAFLPPN PPSRTCIQAG DLPGEGTIIE IECIAQA