Gene CNK00460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00460 
Symbol 
ID3254431 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand- 
Start bp137693 
End bp138705 
Gene Length1013 bp 
Protein Length243 aa 
Translation table 
GC content45% 
IMG OID638253540 
Product35S primary transcript processing-related protein, putative 
Protein accessionXP_567615 
Protein GI58260410 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1500] Predicted exosome subunit 
TIGRFAM ID[TIGR00291] rRNA metabolism protein, SBDS family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACGCC AGCCCGGAAC CCAGATCAAG TATGTGAGAT ATAGAACACT GGAACCAGTC 
ATCCCAGCAA GATCGCTGAT ATGTCTTTAT AGGCTTACAA ACGTCAGCAT TGTGCGTATG 
AAGAAAGGTG GTAAGAGATT CGAGGTGAGT CCTGCAGTCT AAGAATTGTA AACATCTTTG 
ATCAGTCAGT AGATCGCTTG CTATCAAAAT AAAGTCTCGG AATTCCGATC TGGAGTGTAA 
GCACCAAGGA GCCCGCCTTA TCATCATCTT GATGTCTGAC CCTACAACAG CGAGAATGAT 
CTTTCCGAGG TCCTTCAAAT TGAACAGGTT TTTACCAATG TTCCCAAAGG TTTAGTTGCC 
AAGAAGGAAG ACTGGTCCAA ATGTTTTGGC ACGGATGATT TGAATAAAGT GATTGAAGAA 
GTGCGTAATC GATGAAAAAC TAGAACGAAT TCTGCCGTGA CGATTGGCTA AAGCACAACA 
TAGATCTTGA AAAAAGGTGA ACTACAAATC AACAATCTCG AGAGGACGCA ACACCTCTCA 
TCCCTCTCCC GTGAAATTGC AACCATCGTT TCTGAAATGA CTGTCGATCC CAACACCTCT 
CGAAAACACA CTGTTGGTAT GGTTGAGAAA GCTATGGCAG AAGTAGGATT CAGCGTCCGA 
GCCGACAGAC CTGCGAAAGC TCAAGCTCTG GAATTGATCA AGAAACTCGC TGAAGGGGAT 
GTCTTACCGG TTCGAAGAGT GAGGATGAGA GTACGGATAA CTATGCCTGG GAAGGATGCC 
AAGAGATGCA AGGACAAGAT TGTCGCCGAA TGTGACGAGG TTGAGGAGGA GGATATGGGT 
ATGGAGTGGG AAGCGGTAGG TGGCTCTTAC CTACGGTTCA GAACGTGAAC TAACTAATTA 
AATCTTAGAT TGTACAAATC AACCCTAGCA CCTTTAGGAC ACTGACAGAT TTGGTCAACA 
ACGAAGCCAA AGGGAAGGGA AGAGTAGAGT CCATGGGAAG CGTTGGAAAC TAG
 
Protein sequence
MLRQPGTQIK LTNVSIVRMK KGGKRFEIAC YQNKVSEFRS GVENDLSEVL QIEQVFTNVP 
KGLVAKKEDW SKCFGTDDLN KVIEEILKKG ELQINNLERT QHLSSLSREI ATIVSEMTVD 
PNTSRKHTVG MVEKAMAEVG FSVRADRPAK AQALELIKKL AEGDVLPVRR VRMRVRITMP 
GKDAKRCKDK IVAECDEVEE EDMGMEWEAI VQINPSTFRT LTDLVNNEAK GKGRVESMGS 
VGN