Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK00420 |
Symbol | |
ID | 3254630 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | + |
Start bp | 124176 |
End bp | 128574 |
Gene Length | 4399 bp |
Protein Length | 1277 aa |
Translation table | |
GC content | 52% |
IMG OID | 638253536 |
Product | conserved hypothetical protein |
Protein accession | XP_567611 |
Protein GI | 58260402 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0293] 23S rRNA methylase [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCTTTACGCA ACAACACCAA AATATCCCAA GCATATCCGC CACTTTGCCA TCTCCCGAAA AAGGGGGACA CTCTCGCCTT CCGCCAAACG CCAGTCAAAT TTCATCTCCC CTCCACTCGC GAAAACAATG CCCACTTCCA AGTCCTCAAT CGATCATAGG GACGTCTACT ATCGCAAGGG CAAATCCGCA GGCTACCGTG CCCGCTCAGC ATACAAGCTC CTGCATCTCG ACGAGGAATT CGACCTTTTC ACCAATGTCC ACACCGCGGT CGACCTCTGT GCCGCTCCTG GGAGTTGGAG CCAGGTTCTG GGGCAAAAGC TGAAACCGAA GAGTAAACAA GGCGGTGAGG GAACCCGAGT CGTCTCTTGT GATCTACAAC CTATGGTATG TCCCCATGTC CTATGTTTTC ACGATCCTAT GTCTCCATCG TCATGAAAGT GCTGATCAGA GGGCATGGGG TCGCAGGCGC CTTTACCAAA TATCACGACG CTACAAACCG ATATCACTCT TCCCTCCACC ATTCCGCTCG TGCTGGATGC TCTCGGTGGA CGAAAGGCTG ACCTCGTCGT ATGCGACGGT GCTCCTGACG GTAAGCTCCT TTCATTTCTC CTCTTCTGTC AGCCTTTGTT AACCCAAGCA TACTTCCGTC GCCACGCAGT GACGGGTGTC CACGATCTCG ACGCCTACCT CCACTCCCAA CTTCTCCTCG CCGCGCTCAC GCTGTCGTTA ACGCTCATGG CACCCGGCGC GACCCTGATT TTCAAGATCT TTCTCTCTCC GCTTGATCCC CGGGCAGAGT TTTTGGCTTC GCAGTTGAGG TGTTTCTTCT CCAGTCCGCT TCCCGAAGAT AAAGAGAAGG AGGACGAATT TGGACAGTAT GCGGAGTTTG AGGAGGAGGG GGAATATGCG GAAGAGGCAG GACAGGACAA AGGAGATGAG AAGAAGAGGA ATGTGGGAAC AAAAGGGTAT GATCCACAAG GACGGCGAGG TGGGGTGTGG GTTAGGAAAC CGAGAAGTAG CCGTCAAGGC AGTGCCGGTA CGTCTACCTC TTCACGCTCT TTCTTTTTTC TCTCTTTTTT TTCGCTCTTA CCTGACGTGA GGACACAGAG GCTTTCATCG TCTGCCGCAA CTTTTCACCT TCCTCCCTCC CCCTCCCGCC GACATTCTCC CCCTCGGCTC TTGACAAACT CCGGACCACC ACAGGAACCC TCACTCTCGA TTCCCTCTCC TCTCTCGTCC CCCAAGACGA AAGCAAAGGT GAAGAGATTC AGGGTTTCAA AGGAAGTAAA GAGCAAGTGA AGCAGCAATG GCACAGATGG GAGATGATCA AGGGGTATGT GGGCGGTGGG GATTTGTAAG TTATTATGCA CAAATCGTAC AATCTGTCAA GGCAGGAAGA AAAAAAAAAT GTTAAGTACA GACTTTAGGT CATCATCATC TTTCATTCCC TCCCTTTATC CACTCTTACC ACCATCACTA CCAGCACAGA GTCCAAAAAT GACATTATCA TCCCCTCCCA AACTCCATCT CCCAATGCCA ACCACCCCAC CAAACCTGGT ACACCATATC CTGAAAACTC CCGAAATCAT CTCCCCACAT TCATCCACTG CAAGTCCCAA GGCGCTACAG CCCCAACCGA CGCCTGTCGA CGAGCCGCCA GAATATTTTT CTCCCAAGCG TGCACATATC CAGGCTCTTT TCTTGTCGCC TACGAAAATG AAAGAACACC GACAAGGACA AGGACAAGGA CAAGGGCAAG GGCAAGATGG TGGAGGCACT TCGAGACAAA GCTCGTTGGA TTCGTTGACA CCTAATCCAT CGCCTGTTGG GGACGTCGAT TCAACCCGAC CTTGGACTTC TTCATCGCCT CCATCTTCTT CCATGTCCGC GTCCCCGCCC ACGCCTGTGC CGCCAACAAT AACAGCACCG CCCCAAGAAA AGACTTCTTT GAGCATTCCT TTGCTGTTAC ATTCAGCGTC CACCTCCAGT GCTGTTTCTG ATGGCGGCTA CGGCATCCAC GGTGTCCACG GCGTTCACAG CGTTCACAGC GTCCACAGCG TCCACAGCAG TCGCCCCCAA ACCCCTGCTA CTCTTGGCGT CATCACCCCA GCCCTAGCGT CACCGGCGCT AAGCTCGAGT AGCAAGACGG ATTTATTCTT CTCTGCTTCC TCTGCAGAAT TACCTACGCC TCCCCGTGCG TTATCTCCAG CATCTGCTTT GGACAAGGAA CCTTTTTCTT CTTCTTCTGC TGCTTCTTCG GGTTTGGATG TGAGTGGTAA TGAGAGAGCT CAATCGACAA CGATGCCTTC TTCTAGCTTC CCCTCCACGG CCACGTCCGG GGCCGCAAGT TGGAGCGGAA GTGGGATATC CACTGTAAAA CTGAGGTTAC CCACAAGGAA AGAGAGGTTT CGAGAGACAG TCATCCCGGC CGAAATGAAG GATGAGATGG ATATAGATAG AAGTAGGGAA GGATGGGGTG CACCGTTCGG AATGGGATTG GGAGCTGGGT TCGAAGAGAT TAGTACATCT CGGCTGAGGA GTTTATCAAA TCCTATCGCT CCCCCGCCGG CGCATACTGT CCCTCCAGCA CCACCCGCGC CTCTACCTGC ACCTCTGCCT TCGTCATTCA CAACGCAGAA TAGCAGTAAT GACGGGGATA GTCGACCGGA ATTTGCCCGA CAGAGTTCTT TGACGCCGAC AGTGGTATCG CCACAAACAC CCAGGGCTGG TTTCTTTCCC CTCAATAATG CCCGTACCAA AGCCAATGCG GTGCCGTCTG TTCCATTCCA TCCTTCCCCT TCTGCGGGGG GATATACACC TCCACCTCCA CCTTGGAAAT TGAGACGTAA AGAATCTCAA CAGCTGGAAA GGGAACACCG TCAAGCAGGG GTGGATGAGA GTGTGAAAGC TGGGGATGTG ATCGAACCTT GTTTTCCAAA TACGAATGCG GATAATAATG GTGAACACGA AAAGGAAAAG CGTAAAGAAA GAGTCATCGG AGGGTGGAGG TTGGTCAAGA AGATGGGAGA AGGAGCTTTC TCAGCAGTTT GGTCGGCCGT GCCTGCTGGT TCAACACCCT TATCTTCCAC ACCCACCCAC GCGCCCACCG CTACCAGCCT CCTCGTCGCA CTCAAACTCT TGACCCACCC GTTGCCTGAT CATCGAACAC GTATCGCCTT TCTCCGAGAA GCTTCCGTCT TGCGACACAT CTCACACCCT TCTATCGTGG GGTACATTGA TGATTTCTCA ACGGAAAGAC ATGATGTTTT GGTGTTGGAA GCGGCTGGGG GAGGGGAATT GTTCGAGTTG ATGAGTGAGG AGGAGAATAG GCGGCGGATG ATCTTGCCTG CGCCTGCGCC GGTAGCTGGT TCAGAAGAGA GTGAAATGGG CTGGGATAAG GATGGTGAAG GTTTTGTGAG GAGGGTGTTT AGTGAGCTCG TCAAGGCTGT GGGGTGGTTA CATGAGGTTG GTATAGTACA TCGCGACATC AAGTTGGAGA GTAGGTACCA TTTACATACC TCCATGTTCG AAAAGCTAAT GGCTTCGGTT AGACATATTG TTCACCACCA ACCCTTTCAT CCTCCCACCT ACAAGCACAT CCTCCATCCC ACTTCACCTC CTCCCTCCAC CTGGCCAACC ACTCATCAAA CTGACCGACT TTGGTCTCTC ACGGTTCATT TCCCCCGCTT CACCTCTTCT CTACACACGA TGCGGTTCCG AAAGCTTTGC AGCGCCAGAG ATCATCATGG GTAAACCATA CGATGGCCGA GAGACAGATG CCTGGGCATT GGGTGTGGTA CTCTATGGCT TGATCATCGG TGAACTGCCT TTTGATCGGG AGGAAAGCAT TAAGTTGCCG GACGGGATAG CGACTCCCGG AGGGGGAAAT AGTGAAAGAG TAAGAGGGAG GAAGAAGATG CACCGGATCG CCAAAGGGGA ATATACCTGG CCATCACCCG AACCTGCACT CTCTCAAGAT ATCCCAGGTG CCTATGTGCC GGGTACAGCG ACTCCATCAG CGCGAGCAGT GATTTCCTCA CTTCTTGAGC GTAGCCCTTC AAAGAGAGCG AAACCAAGTG ATCTGTGGGA GTATGAATGG ATGCTTGGGC CTGGGGGCGT TCCGCGACCT GTGGAAGGGG CGGGAACGCC ACAGCAAGAG GGAGTGGGAA AAGATAAGGG AAGGGAGGCG TCTGGAAGAG GGAGAAGGAG GGTGTTGGAT GGATTTTTAG TGGAAGAAGA GAGAATTGAA GATGTCGCAA TGACAGAACA TTGAAGAGGG TAAAAGGACA CTTATCTTGT TGCAATGGCG TGAATCTTGT GTTTAGTTTC ATCTTGTCTT GGGTTAGCGT ACCCTTAATG TCTTTGGGTC TATAGTCAAT CTCATATATT ACCACTGTT
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Protein sequence | MPTSKSSIDH RDVYYRKGKS AGYRARSAYK LLHLDEEFDL FTNVHTAVDL CAAPGSWSQV LGQKLKPKSK QGGEGTRVVS CDLQPMAPLP NITTLQTDIT LPSTIPLVLD ALGGRKADLV VCDGAPDVTG VHDLDAYLHS QLLLAALTLS LTLMAPGATL IFKIFLSPLD PRAEFLASQL RCFFSSPLPE DKEKEDEFGQ YAEFEEEGEY AEEAGQDKGD EKKRNVGTKG YDPQGRRGGV WVRKPRSSRQ GSAEAFIVCR NFSPSSLPLP PTFSPSALDK LRTTTGTLTL DSLSSLVPQD ESKGEEIQGF KGSKEQVKQQ WHRWEMIKGY VGGGDLKKKK MLSTDFRSSS SFIPSLYPLL PPSLPAQSPK MTLSSPPKLH LPMPTTPPNL VHHILKTPEI ISPHSSTASP KALQPQPTPV DEPPEYFSPK RAHIQALFLS PTKMKEHRQG QGQGQGQGQD GGGTSRQSSL DSLTPNPSPV GDVDSTRPWT SSSPPSSSMS ASPPTPVPPT ITAPPQEKTS LSIPLLLHSA STSSAVSDGG YGIHGVHGVH SVHSVHSVHS SRPQTPATLG VITPALASPA LSSSSKTDLF FSASSAELPT PPRALSPASA LDKEPFSSSS AASSGLDVSG NERAQSTTMP SSSFPSTATS GAASWSGSGI STVKLRLPTR KERFRETVIP AEMKDEMDID RSREGWGAPF GMGLGAGFEE ISTSRLRSLS NPIAPPPAHT VPPAPPAPLP APLPSSFTTQ NSSNDGDSRP EFARQSSLTP TVVSPQTPRA GFFPLNNART KANAVPSVPF HPSPSAGGYT PPPPPWKLRR KESQQLEREH RQAGVDESVK AGDVIEPCFP NTNADNNGEH EKEKRKERVI GGWRLVKKMG EGAFSAVWSA VPAGSTPLSS TPTHAPTATS LLVALKLLTH PLPDHRTRIA FLREASVLRH ISHPSIVGYI DDFSTERHDV LVLEAAGGGE LFELMSEEEN RRRMILPAPA PVAGSEESEM GWDKDGEGFV RRVFSELVKA VGWLHEVGIV HRDIKLENIL FTTNPFILPP TSTSSIPLHL LPPPGQPLIK LTDFGLSRFI SPASPLLYTR CGSESFAAPE IIMGKPYDGR ETDAWALGVV LYGLIIGELP FDREESIKLP DGIATPGGGN SERVRGRKKM HRIAKGEYTW PSPEPALSQD IPGAYVPGTA TPSARAVISS LLERSPSKRA KPSDLWEYEW MLGPGGVPRP VEGAGTPQQE GVGKDKGREA SGRGRRRVLD GFLVEEERIE DVAMTEH
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