Gene CNK00300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00300 
Symbol 
ID3254493 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp92747 
End bp94857 
Gene Length2111 bp 
Protein Length361 aa 
Translation table 
GC content47% 
IMG OID638253524 
Productcell wall chitin biosynthesis-related protein, putative 
Protein accessionXP_567600 
Protein GI58260380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.574188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACATTTTCC GCCTGCTCTA TTCTTTCGGT CTTAATCCCT CCTCGAAGAC GGTAGACGGA 
CTAGCGGCGG CAAATTACCG CGTATCCTCC AACTGTCCAA CCACAATACC ATACCCGAAT
CAGCTCAATC TCCCTTCGTC GCAGAGATCA CGTCGAATCG CGTCCCTATC CATCACCTCT
TGCGAGCGCC AACCAAATCC CCAACCCTCC CCAACCTCAC CCATTCACCA TCTGATCCTA
CATACCCTCC AATAAGTATA CTTCAACCAT GTCGGATAAC GCGGCGTTCA AGTTTGGGTC
CTTTGATTAT ATATGTGAAC ATGCCGCTTT AGTGGTTTGT CCCATGCTTG GTGATCAGCA
AGGGATGGCT CCGACATGTT ACAGCCGAAA CGTCCAACTG GGTAGTCAGA TTATCTTCCA
GCCGGGTGAG TGATCGGGAT GGGCAACTAC GGAAGGTTTA GTTTCAGTGC ACTAACCAGA
TACCGATAGC AACATGCATC CTGCACATTG CTGCGTTGGT CATGGCGACC ATCATGCTCC
TTCACGTCCG TTCCAAATAT ACCGCTGTTG GCCGAAAAGA AATTGTCCTG TTTTTCTACA
TGTACATTTG GGTCGAGCTC TTCGCCATCT TCCTAGATTC CGCCATCATC CCCACCGCCA
ACAAGGTCTA CCCTGTGAGT CACTTTCACT TTCGACAAAA TGACTTTTTG CCTGATAAGA
GTAACCTTGT AGTGGTTCGC GGCGATATAC GCGGGTAGCG TCGGCGCGCT GTATTGGTGT
CTTCTTTTGA ACGGTTTTGT CGGGTTTCAA TTCCATGAAG ACGGTACACC CATGTCACTA
TGGTTCCTTC GTATCTCCTC ACTTGTCGTC GGTGCCGTCT GTTTTGGTAT CCCAGTTGCT
ACATTCAAGG GAACCTCCTC TTCCATGTCA CCGACAAATA CTGTGGGATT GTTCATCACG
TACTTGGTAT TCCCTTGTGT GTGTGTCTTG ATCTACTTTA TCTCGCAGAT GTTGTTAGTG
GTTAGGACTT TGGATGACCG ATGGGTAAGT CAAAATAAGT TTACATACAT TGAAGGACTT
ATCTCTGGGA AGAAAAAGCT AAATAAAACG CGTAGGTTAT TGGTGATCTC CTTTTCATGG
CTGGTTTCTA TATCGCCGGT GTCCTTCTGT TGGTCACCTT CTCAGTAACA ATTTGTGACG
CTGTTAAGCA CTACGTCGAT GGCGGTATGT CCTGAATATC CCCTACCGTC TCCCACATTT
TATGGACTGA CATCCTACCA GTTTTCTTCT CTACCCTCGC CTTCCTTTTC GCCGTCATGA
TGGTCTACAA ATACTGGGAC TGTGAGTTTT CACTCTGCCA CATCGCGATT GTTCGAGATA
CATTCTGATA ACTACTTGTC CAGCTATTAC CAAGGAAGAT CTTGAGTTCT CCGTTGGCTC
TAAGCAAGCT GTATGGGACG TCAAAGACCC CCTCCTTGCC GTATGTCCTT TCTATTCCTT
TCTTCCAATC GTCTACTGCA AACTGACTAT TGGCCCTCTT ACGATCGTAG ACCGGTATGG
AATACTACGA AGACGATGCC CAATCAGCAT ACCGCGGGGC CGGTGGATCC CTCGTTGGCG
GATACAACGG TAACCAATAC TATGGTAACC AACCTGGCTA CGCTCAGAGC GCGTATGGGC
AGCAAGGGTA TGGCCAATAT GGTGCCGGCG GCGGGTATGG GCAAGGACAT TACTAGCTGG
GCTAGTACAT ATGTGCCCTT TGAGATGATC AGCAGAATGG AGGAAAGAGG GGCATTTTGT
GATGCCAAGT TGTGACTTGT CGATGACGTC GCATGTCAGG TGGTGGGATG GACAATTCAC
TTCGTAAGGG GATGGTGTAT GATAAGTTCA TCCAATTTAA TTCTCCTTTC AATACTTTTT
TTCCTCTCTC TGTAGCTTCC CTTTATTACT CAACCACATG GTTACGTTTT CTCCATATCA
CTTCATTAGG TGTTCCCTAC GTCTTGTTCC ATTAACAGAA TTGGAAGGAG TAATCTGGTA
ACCCACTTTT TACGTATTAT TCACGAGCTG TTTAACGTAG ATGATCCTTA TGCACTGGAC
AATTAGTCTG A
 
Protein sequence
MSDNAAFKFG SFDYICEHAA LVVCPMLGDQ QGMAPTCYSR NVQLGSQIIF QPATCILHIA 
ALVMATIMLL HVRSKYTAVG RKEIVLFFYM YIWVELFAIF LDSAIIPTAN KVYPWFAAIY
AGSVGALYWC LLLNGFVGFQ FHEDGTPMSL WFLRISSLVV GAVCFGIPVA TFKGTSSSMS
PTNTVGLFIT YLVFPCVCVL IYFISQMLLV VRTLDDRWVI GDLLFMAGFY IAGVLLLVTF
SVTICDAVKH YVDGVFFSTL AFLFAVMMVY KYWDSITKED LEFSVGSKQA VWDVKDPLLA
TGMEYYEDDA QSAYRGAGGS LVGGYNGNQY YGNQPGYAQS AYGQQGYGQY GAGGGYGQGH
Y