Gene CNK00260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00260 
Symbol 
ID3254472 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp83341 
End bp85046 
Gene Length1706 bp 
Protein Length353 aa 
Translation table 
GC content47% 
IMG OID638253520 
Productexpressed protein 
Protein accessionXP_567596 
Protein GI58260372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.814513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TATCTTTCTC AGCTCGTAGA GATGACTCAC CTTTCTCGCA CTTTCCCTGC ACCCTCCGCT 
CGGACCTCTC TCCTCCCTAA CGCCTCCTCG CACAGTCCTC CTACTCTTCC TCCCTCCTTC
TTCCCTCTCT CTCTCTCCTT CGGCGCCGCA AAACTACTTC CCTTTCTTCC TCTCCTCTTC
CTTCTCTTCC TCCTACCGCG TCGAAGGGAC AAATAGAGAA ATTAATAATA ATGCTTTATC
CGACCAACCT CAACCATCAT CATTTACTAG CGATTTCGTC CGTCTGTTAA TTGACTTTCC
TCTTCCACTG TCATATCCGC TTAGTCATTT TATACTCTAC TGCATCCGTC AATGCCCTGA
ACCTGCGACT ATATAAGACC ATGTAGAAGC CCTTGCCATG TCCGTGTTGT CTTTCATCAC
AGAATTTATT GATTCACAGA CCACGCACAA ATGCCCGAAC GACATACTTC AAAGCCTGCT
CGAGTTTCAG GAATCTCAGT GTCATCATGG CTAGCAAACG TATACATACC GCCTACACCC
CCACCCAAAC CTTCACTCAA GACCTTCAAG AGCCCACTTC TGCCAGATGG TGTCATTCCT
ATTCGGGACT CGTCGAAGCT GGGTCAATCG ATGGAGGACG AGCCGGTTAC TACCCTGTGG
GATGGCTATT CCACCAGGTA TGTAGATGGT ATAATGGATT TTACTCTTCC AGAAAAAGAC
TTCGATCGAG TGTGAGCTCC TGACTATTAT ACTTGCCAAA AGTATGTGAG CACAACCTGA
TCTTTATCGA CGACAACCTT AGCCCTCCGG ACGTCAGGGC ATACTATGCT CTTGTGTACC
GATGGTCACA AGGCGATTAT GACCACCTGG GGTATTTTGA TTTGCATCCA TGCATTTTCC
GTCCGATTAC TGAGCAGGAA GTGAGAAAAG GAGCGGCGTA TTTGGAAAGG GAGCGTTTAG
CCAACCGAAG AGGGTAAGTA CGAGTCATTG GGATCTCCTT TTGACAGATT GTTGCTCGTA
TTGATGACTT CTCATAGTCT TTTCATTGAC CCAGAAATGT ACCGAGACAA GACTGTCCCT
GACTCGACCA CAGTACATGT GTGGCAACAT CTCGGCAACG ATTGGAGAGA AGAGTTCCAC
CGAGCAGAAA GTTCTTTTGG CAAAGTCTAC ACTTTGGTTC CTTCCGGTAC CCCTCCTTAC
GTGATCCCTC ATATCATCAA AGTAGGAACC GCTGGGCACC ATGTTGTTAT CGATATTTGC
TAACAAGGAC CAATCCTTAG ACCAACGTTC GAGCGCCGTT CTTCTCTTGG TCAACAGGAT
TTCCCGCCGA GCTTTTGCAG CTATATGTCG CCTGGGCATA CCATGATTCC TACAATCCTT
TCCTTTACCT CCTCTTGGAA TCCGCCGGCG ACAAATCAAG TTTCTCTGAG ATGAATTTCA
TGGAACTTTT CGACGAGTTT CCGGAAGATG TTTTCGAGGA ACTCTTATAT CCCCTTTATC
GAATCGATTT GATGCCGAAC CATATAAGAA CCATGTGGTT TGACCCTGAT GAACAGTGGG
ATTCCGATGT AGAGAAAGAT TCGACGGTGG AAAAAATAAT AGACGAATAT TACAAGGATC
GGGAAAGAAA AGAGAAGGAG GCAGAGGTGC TTAAAGACCA GGATGAGAAC AAACCAGAGA
CGAAGGACAA GGAGGATATT TTGTAG
 
Protein sequence
MPERHTSKPA RVSGISVSSW LANVYIPPTP PPKPSLKTFK SPLLPDGVIP IRDSSKLGQS 
MEDEPVTTLW DGYSTRYVDG IMDFTLPEKD FDRVPPDVRA YYALVYRWSQ GDYDHLGYFD
LHPCIFRPIT EQEVRKGAAY LERERLANRR GLFIDPEMYR DKTVPDSTTV HVWQHLGNDW
REEFHRAESS FGKVYTLVPS GTPPYVIPHI IKTNVRAPFF SWSTGFPAEL LQLYVAWAYH
DSYNPFLYLL LESAGDKSSF SEMNFMELFD EFPEDVFEEL LYPLYRIDLM PNHIRTMWFD
PDEQWDSDVE KDSTVEKIID EYYKDRERKE KEAEVLKDQD ENKPETKDKE DIL