Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK00200 |
Symbol | |
ID | 3254397 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | + |
Start bp | 60292 |
End bp | 61865 |
Gene Length | 1574 bp |
Protein Length | 337 aa |
Translation table | |
GC content | 51% |
IMG OID | 638253514 |
Product | conserved hypothetical protein |
Protein accession | XP_567591 |
Protein GI | 58260362 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTTTTCCCG TTCCATCTTC ATCTGATCAT CCGTCCCTGA AAAGAGACAC CATGTCAAGC ACAGAGCCCA CCATCATTCC CTCTTCCAAC ACCATGCCTC CTCCCAACGG TGTTCCCGGG GCGACCGGCA CATCTACTCC CATCCTCGGT AGCCGTGGTG GGCCTAGTGG CGGAGGTGCG GGCGGTAGTT TTGGTGTCAA GTCTGGATTG GCTCAAATGT TGAAAGGCGG GTGAGTCATT ATGACTTTTC GGTCGCGTGC AGATGCTGAT GAATAAAAAG TGTTATCATG GACGTGATGA ATGCGGAACA AGCCAAGATT GCGGAAGAGG CTGGTGCCAG TGCTGTCATG GCTCTTGGTA AATTTATTTA TTTCATTACC AGCTACATTT TCTGACACAT ATGTAGAGAG AATCCCTGCC AACATCCGTC GTGATGGGGG TGTTGCTCGT ATGGTCCGTG GTTTATTACC TCAGACAACT ACCATCAACT ATCTGCTGAC AGTATCATAG TCTGATCCGG GCATGATCAA GGAGATCATG GAAGCTGTCT CCATCCCTGT CATGGCCAAA GTCCGTATCG GCCACATTGT CGAGGCTCAA ATCCTCCAAG CTGTCGGTGT TGACTACATT GATGTACGTC ATCCCACGCA AACGCTTTAC TTTGATGGAC ACTGACAATT TACGCCTAGG AATCTGAGGT TCTCACTCCT GCCGACGATC AACACCACAT CGGTAAACAT GCCTTTAAAG TTCCCTTTGT ATGCGGCTGC AAAAACCTTG GTGAAGCCCT TCGTCGTATC TCTGAGGGCG CCGCGATGAT ACGCACCAAG GGCGAAGCCG GTACAGGTGA CGTTGTGGAA GCGGTCAGAC ACCAGCGAGC GGTGATGAGC GATATTCGAA AAGCTGCGAG CATGACCGAC GAGGAGCTCT ACGCCTTTGC CAAGGAGTTG TCTGCGCCTT ATCATTTGTT GAAGGAGACC GCGAGGCTGA AGAGATTGCC GGTTGTTTCG TACGTTTTGT TCTTGTCTTA CTCCAACAAC TCAAGCTAAT GGGATGTCTA GCTTCGCCGC CGGTGGTGTG GCTACCCCTG CCGACGCTGC CCTCATGATG CAACTCGGTT GCGACGGTGT CTTTGTCGGA TCTGGTATCT GTACGTCATC CCGTCTCTCC ATCTCCTTAG TTACCTTCTC TGCCCCACTG ACACTTTCCG GTGTGTTGGG AGAACAGTCT TATCAGGAGA CCCTGCCAAG CGCGCACGAG CTATCGTCCA AGCCGTTACC CACTACAACA ACCCCCAGGT CTTGGCGGAA ATCTCCACCA ACTTGGGCGA AGCGATGGTT GGCATCAGTA CCGCCCATGA GGGTGAGAAG ATCCAAGGTG GACGGTTGGC TGGTAGAGGT AATTAAGTAC TCAAAAGATT GAAAGCGACT GTCACCCTCA ACCCTCCTTT GCTAGTCTCC TAGTATTGTA CCTTATACCA TTTGCGTGGA GTTAGACATC AATTGAACTG GTTGTTATTG GATCAAAGGG GATAAATAAA AAAGTTTTAA ATTATCATGC ATCCGCCTAC CTTG
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Protein sequence | MSSTEPTIIP SSNTMPPPNG VPGATGTSTP ILGSRGGPSG GGAGGSFGVK SGLAQMLKGG VIMDVMNAEQ AKIAEEAGAS AVMALERIPA NIRRDGGVAR MSDPGMIKEI MEAVSIPVMA KVRIGHIVEA QILQAVGVDY IDESEVLTPA DDQHHIGKHA FKVPFVCGCK NLGEALRRIS EGAAMIRTKG EAGTGDVVEA VRHQRAVMSD IRKAASMTDE ELYAFAKELS APYHLLKETA RLKRLPVVSF AAGGVATPAD AALMMQLGCD GVFVGSGIFL SGDPAKRARA IVQAVTHYNN PQVLAEISTN LGEAMVGIST AHEGEKIQGG RLAGRGN
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