| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK00160 |
|---|
| Symbol | |
|---|
| ID | 3254651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | + |
|---|
| Start bp | 48877 |
|---|
| End bp | 52896 |
|---|
| Gene Length | 4020 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638253510 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_567588 |
|---|
| Protein GI | 58260356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0223126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTACTTCC TCGCAGGATG AGAACAGCCA CGACGCAAGT GGAACGGTTA TGGGGCTCTC
ACAGAGACAG GTGACTATGT GGCTCAGATC TCTCAGATTG TCCATGCCAA ATCGAAGATG
ACTATGTAGC TGACGATGAC CTTCATGGAT ATTGCAGCAA CCACTGCAAA ACATAGCATA
CCACCAGTGC TAGTTTTGCC TGCACCTTGC CAACTATAAC TGTCAACGCC CCTTCGGACG
CCTTCTCGAA CGCTACTACG AACGCTTCTC TTCTCTGGAC TCCATCCGAA CGCAGTGAGA
CACTGCCGTG TCTACAGTCG GTTGGCTCCT CTCTCGGAAA CTACAGCACT GCTAGTCCAC
TCTTCGAGAA CTCTGAACAA TTAGACACCA CCACTCCAGC TGCGCCAGCC ATGTCGACCA
TCGGTGATCG ATAATCACAT CAATTCCCTA GCACCGCCTT CAAAGCGATT GAGATGGAGC
TTGGAGTCAT AAAGAACATA GTAATGTACT TCTATAAGAT TGCTTTGTAT TCTGCCACCA
TTGATAAGCG GTAGGTGAAA CCGTAATTGT TTCGTATCCT TCTAATTACT AATGTCTGAA
TGTCTAGTTT TGCCCAGATC CTCTGTACTG GAGAAGCCAT CCGAAAATTC AGAGATAGCG
TGGCCGCCGC GGAGGGAATA ATGACAGCTA GAGAATATGT GTTAGTTATG CTGGTGAGTT
TTTTTTTTCT TTTTTTGGTT CGAGTGGTTA TCATTAACTC TTCTGCGGAC ATTCACACTG
ATAGTACTTG TTGGCAAGAC GATGATCTGG ATGCTGCGGG CAGTCTACCA AGCTATGCTT
CCAAGGAAAG AAAAGATGGT CGTCATCTGT CCACTGGTTG CCATCAAGTA GGAATTCTTT
GCGAAGGCTC AGGAATTTCT CATACCATTG CACTACTGGG AATCAGGAAA TGACCTTCCG
ACTTCAGAAG ACATTCTGAT CTTCTTATCT GTGGAAGAGA TACCTAAAAA AGATTTCCAA
GCTTGGTTAA CAGCAAATGC TTATGCGGCT GTAAGTTGTA CTGGTTAATA ATGGAAAGTT
TTTTCTGATA TGCTCCTTCT GACAGGGAAG ACTTGTGTAT GAGGAAGTGC ATCAAGTATT
GACAGCGTCA GGATGGAGAG TTTCCATGTC TGGAATCAGT ATACTTTCAA TGTTCAGTAT
TCCAAAAGTT AGGAAGGTAT TCCTAAAAAT TATCACTGGA ATTCTGTTCC ATAAGCTCAA
CTGGTTGATC TCTATCTCCA ATACATGCAG GGTTTGTATC AATACCCTGC CGAGACCAAC
GACAGTGAAG CCGATCCCAC CGACTTTGTA CCCAACCCTT ACTTCGATAG CCATCATTCA
GACCTTCTTG CCCCTACGAC GATCCAGAGC ATTCATGTCA CTCCCACGAG CCCCACCTTA
TACATCCTCC ACACAGAAAC CGAAACTCTC TACCGCTCAT TCGATGACAC CCTCGACTCT
GGTTGTTTCA CCTCCGACCT GCAGGCCTAC CTGCACGTCA CGCCCCTGGT CCCCCGGGAC
AAGTGCGATC CAAGCGAGGA TGATGTGGTT GAATGGAGTT TGCAAAGAAA GACCCCATTG
AGGTGGAGAA ACAGGCATAT TCGGGAGATC ACAGGGAAAA AGAGGTCATG TCAGAATTGC
TGCCAGGCTT TGAGCCTTTA GCAAGTCACC TGGTGTATTC TCTAAACGTG TGGTTTGCCC
TGGCGAAGCT ACACGACACA CAGGTGAAAC TCTTTAAAGC CATGGATGAC GAGCTTTTGG
CATTTGGGAA GACACTTCGA GCTTTCAAGG CAAAACCGAC GTCTGACAGC AGCTGCAAGT
CGCAAAAGGA TCCACATTTC TTGACAAGCC TTGGGTATGG AAACTCCCAA AACTCAAACG
ATGGATCACA CGCTATCTTC AGTTCAACCT TTCGGGCCTA CTGTTGGTTA TATCACGGAA
ATGGTCAGTA CACTTACATC CGTCCGAAAA GACTGCCCCC TGCTAACATT TTGTTTGATG
GTGTGGCAGG GTGAATTGCA GCACACGAGC TTGAAAAGAC CCTTGCGAAG TATCGCACGA
TGATCAGTCA TGCAGTGTAA GCTATCGGCT CTTGCTGGAA TTGAATGCGT AACAATTTCC
TCAAGCTTCC TTTCCTTACC TATTTTACTT TCTAAACCTC TAACCTCTGC CATACCTCAT
AAAAACATGA CGACTTTGTC AAACAACCCT GAAGAAGAGA GCTCGGATTA CCAGACTGAC
ACCGCTGGCG GCAGATCGGT CAAAACATCA TCCTGGGTAA GGCAACCCTC TTTCAAACCC
CTTCCTTCAC TGCCCTCCAA CACACCCACT TCCTCCCTCT CTTTACAAAA TCCAGGAGTT
GGAGATCAGC CCCCTCTTGC CGGGATTTCA ATTCCCTCAG CCGACCCTCA AGCCCTTCTC
CCCTCCAGCA ACCTAACCTC CACCCAAGAC GCCGAAGCAC AGGATGATTC TGAGCTTTTG
GCGCATTCCC TTTTATCTTG GGCGATCTGC GGTAAGTTTA TTCAACTGCA TGGTTCCGAG
TACTACTCAT TTAATACTGG ATAATTCAGC AACAGTCGAG GTACTCCTCG CAGTCGTTTT
GCTTGGCCTG ACATGAAGGG CCGTCAATGG CGACCCAATC CTTAAGACGT GAGTTTAGAC
CACTTGTTAC TGGACAAGTC ACCCAACCAA AAAAACACCA AAAAAACACC AAAAAAAGAA
ACTGAAACTA AAGCTCTCCT GATTTGAATA ATAGGGCCAT CAGAGCCGTT AGCCTTGTTT
CTATTGTTTG GTTTGGCTAT CGGGCCCCAG ATGTATACAG CAAGAGGGGC TTGGAAGCCG
AAAAGGACTT TGCGAGGTAA CTAAAAAAGC AAAAAAGGCC GATAGCTAAG ACCTGTCTTA
GTTAATTGCC CACGTCGTGT TCCGGGTAAA TGGGTCAAAT CGGCCTCTTG ATGCATATGT
TATGTAAGTT ATTCTTCATC ATTACTACTT CACATCATCT TTTAACACTC ACTGCCAAGA
TCATAAACTG ATCATCATCC ATGGGGGGAA ATGTCCTGAC CTAAGTGTTC GCGAAGGCAG
ATATTTCTCT GATCCCTTGG TGAGAATCTC AAACACATTC CCTAGGCCCT TGCCATATAT
ATTGCCGTTC TCATACATTT CTACAATTAT TTTACTTCGG AAGAAAAAAT CGGCAGGGAT
AGTGTCCATC TGCTCAGGCC GGTTTGCGAG GATTTGATCT CGGACTCGAT CAGCGAAGCA
GCTTAACTGC TTAATCATTT CATCAAAATT GGTATCACCG CCAGTTGACC AGGCATCGGG
GAGGTAATGG TTGATTTCCC AGTTGTGTAG TATGTGTAAA GCCGCTGTTA TAGCTCTGGC
AGCTACTAAC CACTGCCATC GATGGCATTG GAGAAGAAAG CACAAATATT AATACTGGAA
CACAATAGAA AGAAACTGGC TTGTAATGGT TTTTGTTTCT TTTTCTTTAG GTAAACCCCG
AACTCACGGT TCGATATTCC GACAGAAGGG TTTCATCGAT TTGAGGTTGC TCAGGACTCT
GTCCCGACTG TACGCGCTGC TCAATATCAT GTCTCAAATA GCATTCGCAA AGGTGAACGC
TGTCCAGAGT CAAAAGCCAA GCATTACACA ATTCGGATCT TGACATCTAT AGTTTTTCAA
TCAATTGAGC AGAAGCCCAT TAACTAATAC ATATTTGTGC ATCGGCGTTA AGAATCGATA
ATGACTCACT GATACTAAAG GAGTGTTGAA TCTTGCAAAG TGATACTTCT TCTCTTCGGG
TATGTTGCCA TGTCGATAGA CAATTGATGA ATGAGAGTCG TTGACTTTGT TGAAAGCGGA
ATTTGCCAGG AGATCTCCCG TCTCGTTGAA GAACTTAAGG GCATTGGGGT ACAGATCAAG
ACAATCTGGG AAGAAAGGAA CTATCTGGGG AATTTGGCCG ATGGGCAGAT AGGCTGGAGG
|
|---|
| Protein sequence | MLMRLEDLCM RKCIKVCINT LPRPTTVKPI PPTLYPTLTS IAIIQTFLPL RRSRAFMSLP
RAPPYTSSTQ KPKLSTAHSM TPSTLVVSPP TCRPTCTSRP WSPGTSAIQA RMMWLNGPLA
SHLVYSLNVW FALAKLHDTQ VKLFKAMDDE LLAFGKTLRA FKAKPTSDSS CKSQKDPHFL
TSLGYGNSQN SNDGSHAIFS STFRAYCWLY HGNGQYTYIR PKRLPPANIL FDGVAGFLSL
PILLSKPLTS AIPHKNMTTL SNNPEEESSD YQTDTAGGRS VKTSSWVRQP SFKPLPSLPS
NTPTSSLSLQ NPGVGDQPPL AGISIPSADP QALLPSSNLT STQDAEAQDD SELLAHSLLS
WAICATVEVL LAVVLLGLT
|
|---|
| |