Gene CNK00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00080 
Symbol 
ID3254503 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp23454 
End bp25904 
Gene Length2451 bp 
Protein Length567 aa 
Translation table 
GC content49% 
IMG OID638253502 
Productlipid metabolism-related protein, putative 
Protein accessionXP_567777 
Protein GI58260734 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTCAACGTC TTCGTTCGAC TGACATAGAT TTACCACAAG CTCTAGCGTT GGCTACCTTC 
CCGACAATTC ACATTCATTA GAACGTAGAT CATACTCACT CTAGCTCCCA ACAAACCGTC
AAAGTCCGTG TGAAAGGGAC AGGTATATCG ATAACTCATC GGCACTCGAC TCCGTACCCT
CTCCATGCTG TCCTTGAAGG AAAGTAAAAA ATCCAAACCA TCCAAGGAAC ATCCAGCAGC
GACCAAGGCT CAGGGGACGA CCTTCTCAGC TATCCTCTCG GCAATCTACT ACTACACCCT
CGGCGCTCTT TTCTCGAACA TCTCCAATAG CGTCTACTCT CTCGTCGGTT CCTTAGGCAT
GGCGAGGTGG GCGAGAGATA TCGTGCGAAT CGTACCCTCC AAACCTGGCA TAGTTAAGCT
CAGGAGCAGT TTAGGGTCTG GAGGTGCGAA GACGGGCAAA GGGAACAAGA ACCTGACAGA
GTGGATTAAT GAGAGTGTGC CGAGTTTGAT GGGGAGGTTT ACTCCTGCTG CTTGGCTTCC
AAAGTAAGTG GCATGATCAG AGCGACGGAT GTATATGGGC TAAATAGTGT CCTTAGCGGG
CACCTTCAAA CACTTTTCAC AGCTGCTGGT GACTTCACCA AAGTCGATAA AGTTCATTAC
ATTCGGTTAG TTATATCACG ATTTTTGTTT CAGCCGTAAG CGGCCCTGAC AGTCATTCTT
AGTACATATC TCCGCTTACC CGACGGTGGG ACATTGTAAG TTCCTTCACT TTTATGCCAT
ATGTTCGCTC AAGGCCAGAT CAGGGGCATT GATGCCACTC CTGAAAATCA CGATGGACTT
CCGGCCGACG CACCGACAGT TGTAGTCTGC CACGGTCTCA CTGGAGGTAG CCACGAAAGT
TATGTCAGGA ATATCCTTGC GTGGGTGGCA AAACCCAAGG AGGACGGAGG TTTGGGCGGA
AGAGGTGTGG TGGTCAATGT GAGTTGGTTT CATACCATGT ATGTGTACGT GTGGTTGACG
AATGGATTTA CAGTTTCGAG GTTGTCTGTA GCTTCCTCTT CATATGTTAA GACCGAGAAA
CTAATGATTC TAAATCGCAG GCGCAGGTGT CCCTGTAACC TCATGCCAAT TGTATTCTGC
AGGTACCACA ATGGATCTCG CCCTTGCCCT CCATTTCATC CGCAACCGCC ATCCATCCTC
CCCTCTTATC GGCATCGGCT TCTCCCTCGG AGCATCCATC ATCTCCCGCT ATCTGGGCGA
GTACGGTTAT TCTTCAATCC TCTCTGCTGG CGTCGTCCTA GGTTGTCCTT GGGATCTTAC
AGCCATGTCG CACAAACTCG AGAACGACTG GTTCACTGCT CGGGTGTATT CTTCTACCCT
TGGGAGGAAT GTTCTTCGGC TCTTTTTCAA AGCCTTTGAC CAAAATCCTG CCGTATTTGA
AGCGCCAGAT AGCCCGATTA GGGAGTACAT TGAGGAACTC AAAGCAGAGA GGAAGAACCA
AGGGACGCAA TCGAGATTGA GGAGAATTGA TGATTTGCTG GTTTCCAAGA TTGGCGGACC
GAGAGGGATT GGGGCATGGC CGTTCCCTAG TGCGAAGGAA TACTATGATT GGGCGAGCTC
GACGCACGTT TTGAGGAACG TCAAGGTGTA AGTTGGTTAT CTTTCATTTT GTCTTCTCTC
TCAAATTGAA ATGGATCTGA TGTGGCTCCC CCATATTAGC CCTTTGTTTG CTATCAATGC
ATTCGACGAT CCTGTCGTGG ATGGAGGTAT GTCTTTTTGT GGAACCGTAA GGCGTGAACT
ATGGGCTAAT CCCGTCACCT TTCCTATAGG TGCTTTGCCT CTCGATGAAT TTGTGGCCTC
GTCACACATT TACACTGCTG TCACAGGCGG AGGTGGTTCG TCTTTCGTTT CTACTTCTTC
CCCATTTTAT TTCTCTTTGG CAGTGAGGCT GATTTGCAAT CCCTATAGGC CACCTCGGGT
GGTTCGATGG TCCTTTCTTC GACAAAACCA AGTCCAAGCA GCGCTGGGTT CTCAAGCCTG
TCTCGGAATT CATTTCAGCT TGCACGCGAG ATCTTTCCCC TCCCGATGAA GATCCTGATT
CCCGCGTGGA CATTGTTGCT GGATCGAGAA TCGGTCCAAA GGGGGCAGAT GTGAAGCTGG
GGGCAGAAGC AAATGGCAAT GCGGATTTTA AGTCGAACAT TGATGCGGAT GTTGAACTGA
ACGCGGATGG AGGATGGGAA TGGGTTGTTA ACCCAAAGTA CAAGATACCG GGATTTGAAA
AGGTTGGGTG GAAGGTATTG AAGGAGGGCG AAGTGGTGGA AGGAGAAAGC GATGAAGGAG
AAGGGGGGCT GGTGCAAGGG TTGTAGGACT TTGAACGAGC GCTAGAATGA TAGACCGACG
GTTATAGAAC CATTCTGTTG TTGGACCCTT ATACAAGTAA TCATACATCC A
 
Protein sequence
MLSLKESKKS KPSKEHPAAT KAQGTTFSAI LSAIYYYTLG ALFSNISNSV YSLVGSLGMA 
RWARDIVRIV PSKPGIVKLR SSLGSGGAKT GKGNKNLTEW INESVPSLMG RFTPAAWLPN
GHLQTLFTAA GDFTKVDKVH YIRTYLRLPD GGTLGIDATP ENHDGLPADA PTVVVCHGLT
GGSHESYVRN ILAWVAKPKE DGGLGGRGVV VNFRGCAGVP VTSCQLYSAG TTMDLALALH
FIRNRHPSSP LIGIGFSLGA SIISRYLGEY GYSSILSAGV VLGCPWDLTA MSHKLENDWF
TARVYSSTLG RNVLRLFFKA FDQNPAVFEA PDSPIREYIE ELKAERKNQG TQSRLRRIDD
LLVSKIGGPR GIGAWPFPSA KEYYDWASST HVLRNVKVPL FAINAFDDPV VDGGALPLDE
FVASSHIYTA VTGGGGHLGW FDGPFFDKTK SKQRWVLKPV SEFISACTRD LSPPDEDPDS
RVDIVAGSRI GPKGADVKLG AEANGNADFK SNIDADVELN ADGGWEWVVN PKYKIPGFEK
VGWKVLKEGE VVEGESDEGE GGLVQGL