| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK00070 |
|---|
| Symbol | |
|---|
| ID | 3254444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | - |
|---|
| Start bp | 19050 |
|---|
| End bp | 22023 |
|---|
| Gene Length | 2974 bp |
|---|
| Protein Length | 834 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638253501 |
|---|
| Product | phosphoketolase, putative |
|---|
| Protein accession | XP_567776 |
|---|
| Protein GI | 58260732 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3957] Phosphoketolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTGCATTTA CAGCCAGTTC ACTCAATACA ACTTCTCAGC ATGGCTGAAG AAACATCCTC
CCTCACCTCT TTTGGTCAGG CTCGCTCGAC TGTCAAGGAC CAGCCCTTGA CAGTGGAGGA
GCTCAAGAAG ATCGATGCCT ACATGCGGGC CTCCCTTTAC CTCTGTCTTG GTATGCTCTA
TCTCCGTCAA AATCCACTTC TCAAGGAGCC TCTCAAGAAG GAACATCTCA AGGCTCGTCT
TTTGGGTCAC TGGGGTTCCG ACGCTGGTCA GATTTTCACC TACATCCACA TGAACCGTCT
CATTAAGAAG TATGATTTGG ATGCTCTTTT CGTTTCTGGT CCTGGTGAGT CCCTTCATTT
TGTTCTATAA TTTCTGGTAT CTGACGACAC TTTAGGTCAC GGTGCCCCCG CTGTCCTCTC
TCAGTCCTAT CTCGAAGGTG TCTACACTGA AGTCTACCCT AACATAACCG AAGATGTCGA
AGGCATGCGA CGCTTCTTCA AGCAATTCTC ATTCCCCGGC GGGGTTGGTT CTCACGCTAC
TCCCGAGACT CCTGGATCTC TTCACGAAGG TGGTGAACTC GGTTACTCCA TTTCCCACGC
CTTTGGTACG GTCTTTGACA ATCCCAACCT CATTACTCTT ACTATGGTCG GTGATGGTGA
AAGTGAGACT GGCCCTCTGG CTGCTTCTTG GCACAGTACT AAGTTTTTGA ATCCTATCAC
CGATGGCGCT GTTTTGCCTG TCTTACATCT CAACGGGTAG GCCACAATTT CCTTTCTCGA
TTAGTATACA ACTGACATTC TTGACTTAGT TATAAGATCA ACAACCCCAC CGTCCTTGCT
CGTATCTCCC ACGAAGAGAT TGAAGCTCTC TTTATCGGCT ATGGCTGGAA GCCCTACTTT
GTCGAAGGCT CTGACCTTAC CTCTATGCAC CAAGCTATGG CTGCTACTCT CGAAAAGGCT
GTCCTTGAGA TCAAGGCCTA CCAGAAGCAA GCTCGAGACT CTGGCAAGGC TTTCCGTCCT
CGTTGGCCTA TGATAATTCT CCGATCCCCC AAGGGTTGGA CTGCTCCTCG AAACGTCTCT
GGCCACCACC TCGAAGGCTA TTGGCGTGCC CACCAGATCC CCCTTGCCGA CGTTGCTTCC
AATTCTGAAC ACCTCAAGCT CCTCGAGGAC TGGATGCGAT CTTACAAGCC CGAAGAGCTC
TTCACTGAGG ATGGTAAACT TATCCCTGAG CTCAAGGCTC TTCCTCCTGC AGGTCAAGCC
CGTATGTCTG CCAATCCTGT GTCTAACGGC GGTTTGGTCC GCAAGGCATT GAATCTTCCC
GACTTCAAGG ACTACGCCAT CAAGGACATC GCTCCTGGTG TGACTCTTGC CCCCAGCATG
TCAAACATGG CGCTCTTTGT TAGGGACGTG ATCAAGAAGA ACCAGACCAA CTTCCGTCTA
TTCGGCCCTG ATGAGACTGA GTCCAACAAA CTCGCAGCTG TGTATGAGGC AGGCAAGAAG
GTTTGGATGG GCGAGTACTT GCCCGAGGAC ACTGATGGTG GTAACCTCGC TCACGCGGGT
CGGGTGATGG AGATCTTGTC TGAGCACACA GTTGAAGGAT GGCTTGAGGG TTATGTCTTA
TCTGGTCGAC ATGGTCTTGT GAGTGCTATC TTTTATACTT TTCCTTAACT CATGACTGAC
ATCTCCTTCT AGCTGAATTC CTACGAGCCC TTCATCCACA TCATCGACTC TATGGTTAAC
CAACACTGCA AGTGGATCGA AAAGTGTCTC GAAGTCGAAT GGCGTGTCAA AGTCTCCTCC
CTTAACATTC TTCTTACCGC CACGGTCTGG CGTCAGGACC ATAACGGTTT TACTCACCAA
GACCCCGGTT TCCTCGACGT CGTCGCCAAT AAGTCCCCCG AGGTCGTCCG CATCTATCTC
CCTCCCGACG GTAACTGTCT TCTCTCTGTC ATGAATCACT GCTTCGACAG CAAAAACTAT
GTCAACGTTG TCGTTGCCGA CAAACAGGAT CACTTGCAGT ATCTCGACAT GGAGGCTGCT
GTTGCGCACT GTACCAAGGG TCTTGGTATT TGGGAATGGG CGTGTGTGGG TGACCCCAAC
GAGAACCCTG ACCTCGTTAT GGCTTGTTGC GGTGATGTCC CTACTATGGA GTCTCTTGCT
GCCACTGCTC TCCTGAAAGA GTACCTCCCA GAGCTCAAGA TTCGTTTTGT TAACGTCGTT
GACCTCTTCA AGCTTATCTC TCACGTGGAC CATCCGTAGG TTCATCTCAC GAGATCCGAC
CCTTGAACAT GTACTGACTT GCTTAATTAG TCACGGTCTT ACTGATCGTC AGTGGGTCTC
TTACTTCACC GAAGACACTC CAATCATCTT CAACTTCCAC TCTTACCCCT GGCTCATCCA
CCGACTCACT TATAAGCGCC CTGGTTCTCA GAACATCCAC GTCCGAGGTT ACAAGGAGAA
AGGTAACATC GACACTCCTC TCGAGCTCGC TATTCGTAAT GAGACCGACC GATACAGTCT
CGCGATGGAC GCTATTGATC GTCTGCCCCA CCTCAAAAAC AAGGGTTCTA TGGCGAGGGA
GAAGCTGTAT GATGCCCAGA TTAAGGCGAG GGACTGGGCC TTTGAGCATG GTATTGACCC
GGAGGACGTC AGGAAGTGGA AGTGGCCTTA TGGTCCCAAG ACTGAGGGTA TTGCGAGCAA
GCTTGGGTTC GGAGGAGAGA ACAAGCAACA GGTTGCATCC GTTGGTACTA GCGAATAAGG
GTTGATCGCA GTCAAAAGTG TAATGTCGTA AGAAGGAAGT GTATTGTACA AACGAAAAAA
GAAAATGAAT TGTCTGTTGG TTCTTGTTCT TAGTTTGAGT GGCCTCCGGG ATACTTTATA
ATGTTTCGCC TTCGGCACTG GTGAATTACC AGCGAAATGT TTTTCATATC TTTTGCATAT
TTCCAATAAC TCTGGAGATT TTCACTCATT CCCA
|
|---|
| Protein sequence | MAEETSSLTS FGQARSTVKD QPLTVEELKK IDAYMRASLY LCLGMLYLRQ NPLLKEPLKK
EHLKARLLGH WGSDAGQIFT YIHMNRLIKK YDLDALFVSG PGHGAPAVLS QSYLEGVYTE
VYPNITEDVE GMRRFFKQFS FPGGVGSHAT PETPGSLHEG GELGYSISHA FGTVFDNPNL
ITLTMVGDGE SETGPLAASW HSTKFLNPIT DGAVLPVLHL NGYKINNPTV LARISHEEIE
ALFIGYGWKP YFVEGSDLTS MHQAMAATLE KAVLEIKAYQ KQARDSGKAF RPRWPMIILR
SPKGWTAPRN VSGHHLEGYW RAHQIPLADV ASNSEHLKLL EDWMRSYKPE ELFTEDGKLI
PELKALPPAG QARMSANPVS NGGLVRKALN LPDFKDYAIK DIAPGVTLAP SMSNMALFVR
DVIKKNQTNF RLFGPDETES NKLAAVYEAG KKVWMGEYLP EDTDGGNLAH AGRVMEILSE
HTVEGWLEGY VLSGRHGLLN SYEPFIHIID SMVNQHCKWI EKCLEVEWRV KVSSLNILLT
ATVWRQDHNG FTHQDPGFLD VVANKSPEVV RIYLPPDGNC LLSVMNHCFD SKNYVNVVVA
DKQDHLQYLD MEAAVAHCTK GLGIWEWACV GDPNENPDLV MACCGDVPTM ESLAATALLK
EYLPELKIRF VNVVDLFKLI SHVDHPHGLT DRQWVSYFTE DTPIIFNFHS YPWLIHRLTY
KRPGSQNIHV RGYKEKGNID TPLELAIRNE TDRYSLAMDA IDRLPHLKNK GSMAREKLYD
AQIKARDWAF EHGIDPEDVR KWKWPYGPKT EGIASKLGFG GENKQQVASV GTSE
|
|---|
| |