Gene CNJ03420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ03420 
Symbol 
ID3254262 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp1075795 
End bp1078181 
Gene Length2387 bp 
Protein Length587 aa 
Translation table 
GC content46% 
IMG OID638253491 
Productmyo-inositol transporter 1, putative 
Protein accessionXP_567421 
Protein GI58260022 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA CTAACATTGA GGATCGTGAT AATAGCTTTC TGGAAAACAA GGCTATTGAT 
CACATTGAGG AAATTGAAAA TGTCAAAGGC TCTCAAGAAC CGCCTAATCT CCCTGGCTTT
GGTGGTCATT TGATAGTGAG TTTATATTTA TATTTATATT TCACATGGAC GTGTAAAACA
GGTGTTAACA CCTGTTCCCT AGGATGAAAA CCTTGTGCGT GTAGAAGGTG AAGATAAAGT
AACATGGTAT CTTTGCTTTT TAGTTGCTGC CGTATGTGCA TCATCCCGTA TTTTTAGTAT
AAAGTGGCAT TAATTGATTC CTAATAGTCG GCAATCGCTG GCTTCCTATT CGGCTATGAC
ACTGGTGTCG TTGGTGTCGC ATTGCCTTTG GTGGGAACCG ACCTCGGTGG CAGCGCACTC
AACTCTTCAC AGCAAGAAAT TATCACTGCA GGTACCACCA TCGGGGCTAT CTTTGGTTCT
GCTATCCTTG GTGGATGGGG TGATCGCCTT GGACGAAAGA TGGCAATCTT GATTTCTGAC
GTCTTGTAAG TTATCTTTTC GACAGTGTTG TACACTCCCA CTTACCTTCT TTATAAAGCT
TTACCCTCGG TGCCGTGATC ATTGCATGCA GTTACTCTGT CCCGCAAATC ATTGTCGGTC
GAATTGTCCT TGGTGTTGGA GTCGGTGGCG CATCTGTCAT TGCTCCTCTT TTCATCGCTG
AGACAGCGCC TACCGCTGTG CGTGGTCGAT GTATTGGTAT CAAGTGAGCT TTATAGGTAT
TATATATGGG TGGACTTCAG CTGACGCTGG AGCATAGTGC CTTCTTTATT CCCTTCGGTC
AGGTGGTCGC CGACGCAATC GGTGCAGGTG TACAGAACCT GCATAATGGG TGGCGATTAC
TTTGTAAATA TGCATCATAC ACCTATTTAC TGGTCCGCTA ACGCATCACC AGTTGCTTTG
GGCGTTGTCC CTTCCGTTCT TCAACTGCTT CTCTTCCACT ATCTTCCTGA GTCACCACGT
ATCCTTATCC TCAGGGGGGA TACCGACGGT GCTCGTACCG TCTTCCAGCA TATCTACCCT
ACTGCTACTC CTGAAATGAT CGACTACAAG TTCCGCGTCG CTCAAGAGTA CGTCACTGCC
ACAACCGCGC TTCAGTCTGA TACCACTTTC TGGGAAAGAG TGAAGAAAGT ATGGAAGACT
GGATCTTACC GGCGATCTAT CACTTGTGTC AGTGTTATTC AAGCCGCCTG TCAACTCTCT
GGTTTCAACA CCCTTCTCTA TTATGCAGGC ACTCTCTTCG GTCTCCTTGG TCTGTCCAAT
CCAGCCCTGG GTGGTCTTAT CCCTGCCAGT ACCAACGCGG TTTTTGTATT AATTGGAATG
TCTCTTGTTG ACAAAGTCGG AAGACGAGGG TTAATGTTAT TTGGTGTGCC AATAATGGTA
TATATATTTT TTTTCATCTA CTCTGATGCG TGTTTTCAAT GACTAACTCA CATCCCTTCA
GCTTCTTGGT CTTGTGTGGA ACATCGTTGC TTTCTATTGT GAGTGGTACT ATTTCGATTG
ACCTACCATC ATCTCTAACC GTCATGCGAA GACATGTGCA AGCCGACAGG CGGATTCCTC
GACACTTCTT ACTCCTATGA CACGACAAAC GTCAGTGTTG TTATTGGTGG TATCGTCTTG
TTCGTCCTCG GTTACGGTCT CAGCTACAGT CATATCGCTT GGTACCAGGC TGAATATTTG
GCCCTCGAAG TACGGTCCAT GGGTTGTGGT GTCGCCACCA CTGCCAATTG GATTGCCAAC
CTCGTTGTCT CCGTCTCCTA TCTTTCGGAG CTCGAAACGA TGACACCCTC TGGTACCTAC
GGTTTCTATC TCGGTCTCAG TGTGATCGGC TTTGTGTTCG TCGTGTTCTG CTTCCCAGAA
GCCAGTAAGT ACTCTTAATA TGCTAGCTTT TATCTTTTTT GGCCGAATAC TGATGGCCTC
ACCTTCCCAT CGATAGAAGA ACTGTCCATC GACGAGACGT CCATTTTATT TGAGAACGAC
TGGGGAGTTA AGCGATCTAT TCAGATGCGC AAAGAGCGAC GTGAGACTCA AAAACGATTC
CATGATGCCG AACTCGCCGA AGCTGCCACA GCTCACATTG AAGCTCGTCA GCAAAAGTCG
ACTTCGGTCA GTCCTGCCGA GCTCTCCAAG TTTATGGCGG GTTTGAAGGG TGGCAAAAGA
AAACCTTCTG TCTCGGTTTA AGCCGCAGCT TGAGGACGTC CAGTGTGACA AGTGAACGTG
GGGTCTTGAT ATGTGCTAGT GTTTTGGCTC TCAAAATGTT CCTAACTGAA GTTCTTGTAT
TTACATATAT ATGATCTGTA TGCGTGTGAT AGATATATAT TGAATCT
 
Protein sequence
MSATNIEDRD NSFLENKAID HIEEIENVKG SQEPPNLPGF GGHLIDENLV RVEGEDKVTW 
YLCFLSAIAG FLFGYDTGVV GVALPLVGTD LGGSALNSSQ QEIITAGTTI GAIFGSAILG
GWGDRLGRKM AILISDVFFT LGAVIIACSY SVPQIIVGRI VLGVGVGGAS VIAPLFIAET
APTAVRGRCI GINAFFIPFG QVVADAIGAG VQNLHNGWRL LFALGVVPSV LQLLLFHYLP
ESPRILILRG DTDGARTVFQ HIYPTATPEM IDYKFRVAQE YVTATTALQS DTTFWERVKK
VWKTGSYRRS ITCVSVIQAA CQLSGFNTLL YYAGTLFGLL GLSNPALGGL IPASTNAVFV
LIGMSLVDKV GRRGLMLFGV PIMLLGLVWN IVAFYYMCKP TGGFLDTSYS YDTTNVSVVI
GGIVLFVLGY GLSYSHIAWY QAEYLALEVR SMGCGVATTA NWIANLVVSV SYLSELETMT
PSGTYGFYLG LSVIGFVFVV FCFPEAKELS IDETSILFEN DWGVKRSIQM RKERRETQKR
FHDAELAEAA TAHIEARQQK STSVSPAELS KFMAGLKGGK RKPSVSV