| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ03350 |
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| Symbol | |
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| ID | 3254242 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 1050778 |
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| End bp | 1052289 |
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| Gene Length | 1512 bp |
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| Protein Length | 364 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638253484 |
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| Product | integral membrane protein sed5, putative |
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| Protein accession | XP_567414 |
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| Protein GI | 58260008 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5074] t-SNARE complex subunit, syntaxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0595382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CATATACATA CCCACTGGAG ATGGCTCCCA AAGACAGAAC ATCAGAGTTT CACTCCACAC
TCAATTCTAT CAAGTCACGC TCAGCCCTCA CCACCAACAG GGCAAAGGGC AAACAGCAAG
ATAGAGAGGC GAAACAGCCG TTGATATCGA ATGGTCCAGG TCAGACTGGA GCGAAGAGCG
AGTTCGGGAA GATGGCGGGT GGAATAGCAA AAGACATTAA TGCGACGACG TTGAAGCTGC
AAAAACTGGC ACAATGTGAG TACGAGCGGA ACTTGCATTG ATCGCGACTC TAACATTCAC
CTCCAGTGGC TAAGCGCAAA ACCCTTTTCG ACGACCGTCC TGTCGAAATC TCTGAACTAA
CCTACATCAT CCGACAAGAT ATTGCTTCTT TGAATTCCCA AATTGCCCAA CTCCAAGCAT
ACATCAAATC TTCCAAGGGG GGTAAGGGTG GTTCCGCCGC TTCGGGAAGT AAGGGGAAGG
GCAACGGGGG GAAACAAGAG GAGGAGCATA ACAGCAATGT GGTGATGCTT CTGCAGAGCA
GATTGGCGAA TATGGGAATG GGTTTCAAAG ATGTGTTGGA ATTGAGGACA CAGAATATGA
AGGCCAGTAA GGATAGAACA GAACAGTTTA TGCATACCGC GCAGGGAAGC TCGGTGCTGG
CTCCTGCTGA GAGTGAGTCA CTTCTTCCCT CTTACCCTCT CTCCGCTGAT CATCGTTTAT
TAGACTCGCT TCTGTTCAAC CAGCCGGGAG ATCGCAAAGG AAAATCCCGC GCCAACACGC
CTACTCCCAA CCCCAGCTCC TCCCTCTCTA ACCTAGGTTC TAAAAGGGGA GAGAAGGAAG
GACAGGACTT CCTGGCTCTG GATATTGATG GGGATAGAGG AGAGAGCGGG ATTGGAATGG
GAGGCGACTA TCAGCAGATG CAGTTGGTCG AGCAGCAGGT GGGTTTTTTT TTCGTTTTCA
CTTGAGTCGT GTGAGACTCC TTCCCATGCC TGTGCCATCA CCCCGCCTAC GAAATCCACG
CCCGATCGCT GCTTCGTCCA CTCGCTTACA CTCTCTCGTT TATAGGACAC ATACATACAA
TCCCGCTCCA CCGCCATCGA ATCCATCGAA TCTACCATTG CCGAACTCGG CAACATCTTT
TCCCAACTCG CAACAATGGT TGCCGAACAG CGCGAGACAG TCCAGCGGAT CGACGCAGAT
ACGACAGATA TCGCCGCAAA CGTCTCGGGT GCGCAGAGGG AGCTGTTAAA GTATTATGCG
AGCGTGAGTA GTAATAGGTG GTTGATGTTG AAGATTTTTG GGGTTTTGAT CATCTTTGTA
AGTCCATTTG TTCTTTTGCT GTTGGCATTC TTTGTCCTCG GAATTCTTTG TTCTCGGAAG
AGGAAGACGC TGATGGTGAT TTAGTTCTTG GTGTTTATCC TTGTATCGTA ATACCTCCCT
GTCAATATCA TTCATTTACT TTTATCATCT TTGAAGAAAT CGTCTAATCG TTGTGTTTTG
GCCCAGATAT AC
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| Protein sequence | MAPKDRTSEF HSTLNSIKSR SALTTNRAKG KQQDREAKQP LISNGPGQTG AKSEFGKMAG
GIAKDINATT LKLQKLAQLA KRKTLFDDRP VEISELTYII RQDIASLNSQ IAQLQAYIKS
SKGGKGGSAA SGSKGKGNGG KQEEEHNSNV VMLLQSRLAN MGMGFKDVLE LRTQNMKASK
DRTEQFMHTA QGSSVLAPAE NSLLFNQPGD RKGKSRANTP TPNPSSSLSN LGSKRGEKEG
QDFLALDIDG DRGESGIGMG GDYQQMQLVE QQDTYIQSRS TAIESIESTI AELGNIFSQL
ATMVAEQRET VQRIDADTTD IAANVSGAQR ELLKYYASVS SNRWLMLKIF GVLIIFFLVF
ILVS
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