| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ03240 |
|---|
| Symbol | |
|---|
| ID | 3254321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | + |
|---|
| Start bp | 1012707 |
|---|
| End bp | 1014335 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638253473 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_567404 |
|---|
| Protein GI | 58259988 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.60705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGGC TCCAATCCCT GGGTTCCCTC CCGGCCCATG CCGAACCAGC TTGGACAGTA
TCTTTCAACC CTACCCGCTC TCTCCTCGCA TCATGCTCCA CAGATCGCAC AATCCGTCTT
TACTCCTACA TTATACCCTC TTCCTCCGAT GGTTTACCAA GCCAGGACGA TTCCCAGGCC
GTGTTTAGTC TTGCTAAGGT TATAGAAACG GACCACAAGA GGACTGTGAG GAGTATAGCG
TGGTCCCCTG ATGGACGAAC ATTGGCAAGT GGGAGCTTTG ATTCGACCGT CGGTGTGTGG
GAGGAGGTTA TTCCGCTTTC GGATGACGAA GAAGAAGAGG ATGAGGGTGC ACAAGGGGTG
TATAAACCGG CTGGAGTGGA CTCGGATGGA GATGGGGATG GGGGGAAAGA GAAGGAGTGG
GAATGCGTGA CGACGTTGGA AGGGCATGAG AGTGAATGCA AATCGGTTGG GTTTTCGAGT
GATGGGGCTC TGCTCGCGAG TTGCTCCAGA GATAAAAGTG TATGGGTGTG GGAAGGTAAG
TCCAATGAAG TTTAATGATT ATGAATGGTT CTAATGCTTG ATTTGTTTAT ATATTTTTTT
CGGTATAGTC CAACCGGACG CCGATTTTGA ATGTATCGCG GTCATGATGG AGCACTCTCA
GGACGTCAAG TCCATCGCCT GGCACCCACA CGAAGAGGTT TGTTCATTTT CGTTTATACC
TTTCCCTTCA TCTATTTCTC AGGCATTTAT TACCTCTTGA GACAACAATT GCTAACGTTG
AATTGCGATA CAGATCCTGG CTTCTGCGTC ATACGACTCT TACATCCACC TCGCTTACGA
CGACCCCGAT TCTGACTGGT GCATCTTCCA AAAACTCCAT CCCTCTCTCC CTTCTACTCC
ACTCACCATC CCATCCACTT CCCCGTCACA TTTAATTGAT GCGTTGGTTC CTACGGAAGA
AGAGAAGAAG GCAGAGGCGG AGTTGCAAGT CCCGCCGTTG GAGGAGGATG AGACTGTTTG
GTGTTTAGCT TGGAGTCCCG ACGGGAGGTG GTTGGCTAGT GGAGGTGATA ATGGTGGAAT
CCGTCTTTGG CAAAGAACGT ATGTCTTTGT ATCGTACACA TTTCGAGACC AGATGCCGGT
AGTGACTGAC TGTAACCTAT TGCAATCACA GAGGCTCACA ACCAGACTCG GCGTTCAAAG
AGATCTTACA CACCGCCGCT CACTCGCGTT CAGTCTTTTC TCTTTCTTGG TCCCCACCCT
ATCCATCCGC CGAGTCTGCC GGCTCCACCG ACTCTACTGA TTTAGGGATG CTCGCTTCTG
CGGGGGAGGA TGGTAAGATT ATCATCTGGC AAATCACCGT CCCTCCATCT CCTTCTTCCG
CTTCACAAGA AATAGATAAT GAACAAATCT CGATCAGACC GATTGCCGCC CAGAAAGATG
CGCACGGCGT GAACGATATC AACTCGGTAG CGTGGTGTGT GAGAGAAGAT AAAAAGGGAT
GGGGGATGTT GAGTAGTGCG GGGGATGATG GGAGTGTCAA GGTTTGGAGG GTCGTCAGGG
ATTAAGGATG TCAAGAAATG TTTTTATTTT TTGATTTTTT ACTTCTTTTT CCATCACATT
TCTATGATC
|
|---|
| Protein sequence | MLRLQSLGSL PAHAEPAWTV SFNPTRSLLA SCSTDRTIRL YSYIIPSSSD GLPSQDDSQA
VFSLAKVIET DHKRTVRSIA WSPDGRTLAS GSFDSTVGVW EEVIPLSDDE EEEDEGAQGV
YKPAGVDSDG DGDGGKEKEW ECVTTLEGHE SECKSVGFSS DGALLASCSR DKSVWVWEVQ
PDADFECIAV MMEHSQDVKS IAWHPHEEIL ASASYDSYIH LAYDDPDSDW CIFQKLHPSL
PSTPLTIPST SPSHLIDALV PTEEEKKAEA ELQVPPLEED ETVWCLAWSP DGRWLASGGD
NGGIRLWQRT GSQPDSAFKE ILHTAAHSRS VFSLSWSPPY PSAESAGSTD STDLGMLASA
GEDGKIIIWQ ITVPPSPSSA SQEIDNEQIS IRPIAAQKDA HGVNDINSVA WCVREDKKGW
GMLSSAGDDG SVKVWRVVRD
|
|---|
| |