Gene CNJ02600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ02600 
Symbol 
ID3254101 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp750752 
End bp752014 
Gene Length1263 bp 
Protein Length383 aa 
Translation table 
GC content55% 
IMG OID638253417 
Productdihydrodipicolinate synthase DapA, putative 
Protein accessionXP_567550 
Protein GI58260280 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.474557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAGGC AGGCCACAAA TGAACAGCGC CTGGCAAGAT ATAAAGGCTC GACCATCGAT 
GTTCAAGAGA CCATCAATCA CCAGTTCTCC CAATCTTACA CAGCTATTCC TAGCCAACAC
TACCCCACTT CACCACACAT TCACACAACA CCAACCACTC AATTCAAAAT GACCGCCAAC
GGTTTCTCCG ACAATGTTTC CAAGTTCTCC AACCCCCGAG GCCGAGTCGG CTTCGACATG
AGCGGTATCA CTCCTGCTCC CGTGAGTTTT CCCTTTGACT CCCATCTAAT TGTACCTTAA
GCAGAGTTCT GACTCCTTCC AGGTCACTCC ATTCAACGAG GACGGCTCGG TCGACTACGA
GGCTATCCAG CGTATTGGAT CTTGGCTTGC CTCCGTCGAG GGTGTCAAGG GTCTCGTCGT
TCTCGGTCAC GCCGGTGAAG GTACCTTCCT CACCTCGGAG GAGCAGGTCA AGGTTATCAA
GGCCTTTGTT AAGTCGGTTA ACAACGAGAT CCCCATCATT GCCGGTATCA CCCGAGAGGG
CAACTACGTT GCTGGTCTCG AGGCGAAACG CGCAAGAGAA GCCGGTGCCG CTGCTGGTCT
GCTTTACCCT TCGCACGGAT GGCTCCGATT CGGCTACCAG ACAGGTGCTC CCCAGGTTCG
TTACAAGGAG GTCTACGAGG CCTCGGGTCT CCCCCTCATC CTCTTCCAGT ACCCCGACAA
CACCAAGGCA ACTTACGACC TGAAGACCCA GCTCGATATC CTTGCCCAAC CCGGTGTCTT
TGCCAGTGAG TAACATCTGT TGTCTGTTCC AAAGAAGTCT CCTGACCCCT TGCAGTGAAG
AACGGTGTCC GAAACATGCG ACGATGGGAC CGAGAGATCC CTGTCATCAG GAAGGCACGA
CCCGACATCT ACATTCTCAC TTGCCACGAC GAGTACCTCC TCCACACTAC TTTCGACGTC
GACGGCATGC TCGTCGGTTA CGGTAGTATT GCTCCCGAAC TTCTCTTTGA GCTCCTTAAG
GCCGGTAAGG CTCATGACTA CAAGAAGGCT CGAGCCATCC ACGACCAGCT CCTTCCCGTC
ACCGCCGCTG TCTACCACCG TGGCTCCCAC ATGGAGGGCA CCGTCGCTCT CAAGCATGCC
CTGGTTGCCC GTGGGATCCT CAAACACGCC ACCATCCGAG GTACCCTTTT GCCCCTCCCC
GAAGGTGCCG ACAAGGAAAT TTATGATGCG ATCTCTGCCG CAAAAATTGC CAAGGTCCAG
TAA
 
Protein sequence
MWRQATNEQR LARYKGSTID VQETINHQFS QSYTAIPSQH YPTSPHIHTT PTTQFKMTAN 
GFSDNVSKFS NPRGRVGFDM SGITPAPVTP FNEDGSVDYE AIQRIGSWLA SVEGVKGLVV
LGHAGEGTFL TSEEQVKVIK AFVKSVNNEI PIIAGITREG NYVAGLEAKR AREAGAAAGL
LYPSHGWLRF GYQTGAPQVR YKEVYEASGL PLILFQYPDN TKATYDLKTQ LDILAQPGVF
AMKNGVRNMR RWDREIPVIR KARPDIYILT CHDEYLLHTT FDVDGMLVGY GSIAPELLFE
LLKAGKAHDY KKARAIHDQL LPVTAAVYHR GSHMEGTVAL KHALVARGIL KHATIRGTLL
PLPEGADKEI YDAISAAKIA KVQ