| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ02470 |
|---|
| Symbol | |
|---|
| ID | 3254153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | - |
|---|
| Start bp | 720359 |
|---|
| End bp | 723153 |
|---|
| Gene Length | 2795 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638253404 |
|---|
| Product | poly(A)-specific ribonuclease, putative |
|---|
| Protein accession | XP_567539 |
|---|
| Protein GI | 58260258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCTGCATCTC CCCAGGCCGA CTATGCTGCC TCCGCCCAAG TCAGCCGCGG TGCAGATCGT
CCGTCCACCG TCGCCGTCGT CGGAGAAGGC CAAGGAGAAG GAGAAGAAAC ACTCCCCGGA
GAAGCGGGGT GCGTCGCCTG TTTGCCAGAG ACCGCGAGCT GACAACGAGC AGAAACTGCC
CAGAGGATAT GCCGCAATGT CATGATCTAC GGGTAAGCTG GCCAGGAGAG CGGTGTGCAT
GCGCTGACCG GGCGACAGCT ACTGCAAGTA CCAGGACCAG GGTGTAAGTG CATCCGTCTG
CGTGAGCTCG GCGTGCTGAC TGTCCGCCAG TGCATCTACT ACCATCCGCC CGTACGCCCG
ACACTGCGCT GCTGCCACTG AAGCTGACCT GTTACTAGGC TGGAGCAGAC CCATCCACGC
CCCAGAACAG CAGCCCAGTC GCCCACGCCC CGACGCCCTC CGCCCCCACC CCTCTCGCCG
GCACTCCAGC CAGAGAGAAG CCGACCTTGA GCATCGAACA TCTCGCCGCT CCCGTATTCG
TTCCAAAGGG TCTTGACTCC TCTCCCAGAG CAAGCACTCC AAGCGTACCG ACCCCCAGCG
CCCCCACGCC TCCCGTCTGG CCGTCCCTTC CCTCGACGGG ACTTTTACCT CGCCAGGACG
TCCAGGTGTC CGCCCAGCCG AGCCATGCCC AGCTGAGTGC TACGGCGTCC CCGATGGCAT
ACGATGATCC CTCGCATATC GCGCTCTCTG CCGCCCATGC CCACGCCCAG GCTCAAGCGC
TGACGCACGG TATCCTTGAC CCGCACGCCC ATGCACCTCC CGTCGACCAG AGCATGTACC
TCCCACCTCG TCAACCGCTC GATTACAATC TCTACGCAGC ACCGCTCCCG AGCATCGGTG
GGAATCCGCT TTACCCAACT CACCCGCACG CGTTCTTCGT GAGCGATGAT TTGAGAAGAG
CGATCCAGGC GAAGCAGGAG GCTGTCTATG CAGGGGCGAA TGGCGCTTCC GCGCCCGGGC
TGCCGCAAGA ACTGGGCGTG TATCACTCTC TCATTCCACT CCCCCTCCCC GCGCCTACCG
CCCAATGCCC CCCTACCCAA TCCCAGCCCT CAAAAGTATA CGGCCTGCCC TCCCCCGTCT
ACCGCGCGAC TTCTGAGGTG GACGGGAATA CGTATTGTCT GCGAAGGGTG GAGGGGTTCA
AGTTGGTCAA TCAGCTTGCA TTTGCATCGA TGGATACCTG GAGACGGATG AGGCATCCAA
ACATCGTCGG GCTAAAGGAA GCGTTTACAA CAAAAACCTT TGGTGATAAC TCGTTAATCA
TGGTGTATGA TTACCACCCT CTGTCTACAA CCCTCTACGA CGAATACCTC TCACCCAATC
CCCCGGAACC ATCTCCCGCT TCCGCCCTCG CTAACCAACC TCCCAAACGA CGTTCATCAC
CGCCCGAGCG GATTCTCTGG TCCTATGTCA CCCAAATCGC CAACGCCCTC AAGGCAATCC
ACAGTTCCGG CCTCGCCGTG CGGAACCTCG ATGCGAGCAA GATTTTGTTG ACTGGGAAGA
ACAGGATCAG GTTGAATGGT TGTGGGGTGT GGGACGTGTT GGCGTTTGAT AACAAAACCC
CTGTGCAGGC ATTCCAACAA GAAGATTTGC TCTCTTTTGG GAAACTCATC ATTTCCCTCA
CTTGCGACTT TTTCCAACCT ACACTTCCTT TTTCCCTTCC GCTCGAACAT ATTTCCAGAC
ACTACTCCTC CGATCTCAGT AATCTCATAC TGTACCTGAT CAGCAAGCCG GCACAGGGGC
AAATCAAGAG TATCGATGAG GTGGTCAAGA TGATGGGGCC TAGGATATTA AACGAGCTGG
ATGCTGTTCA GAGGTATGTC CTTGAGCTTC TCCCACTTCA ATCTCTAGCG AGGAAAAAAA
ACTGATATCG CGTATTGCTG TTACATTAGC TATGCAGATG TGTTGGAGAA TGAGTTGGGG
GCCGAAGTAG AGAATGGACG TATCGTAAGA TTGTTGACCA AATTGGGTTT CATCAATGAA
CGAGCAGAGT ATGTCAAATT CCTCCCCCCC CTTCCCACTC CCCTATACTA TTCTGTTTGT
GGAAATTTCG CTAATTCGCC ATGGTATCAG GTTTGAATTG GACCCCCGTT GGTCTGATAC
GGGCGACAGA TACATCCTCA AACTTTTCAG GGATTATGTC TTTCACAGCG TCGGAGTGGA
TGGAAAGCCA ATTTTGGACC TTAGTCATGT GTTGGTTTGT TTGAACAAGG TACGTCTCTT
TTATTCATCA AAACGACAAT CCCTTGTTTT CACCTTTATA ACTTCAACTC TCGGAAAGAA
AAAAAAAGGT ACTGATTTGC TAAATCACAG TTGGATGCCG GTTTGGACGA AAGGGTCATG
CTCGTCTCAC GGGATGACCA AAGTTGTCTT GTCGTTAGCT ATAGAGAAAT TAAGCATTGT
ATTGAGGCTG CTTTCAAGTG AGTTTTCTTT TCAAAAATCC ATCCATTCGT AATCAGAATA
GTACAGCTCA TCAGAATACC TCTGTTTTGC CCAATTAGCG AGCTGAAGAA TGCGGGTAAT
AACCACCGAG TTCACCGATA GCCTTGTTTG ATTTCCTTTT CGTAGGAGGA TGAAAGACAA
AGGGGTACTT GATGGGCAAG ATTGTGGTAG ATCTTGGTCT GCAGGATTGT TGTAGAATGG
ATAGAGATGA CAAATGCCTT TGTTTTCTCT CTTAATAGCG TTTGATTACA ACCACTAAAA
ACGTTCAACA CGAGGAGGAA AAAACAGTAG AAAAA
|
|---|
| Protein sequence | MLPPPKSAAV QIVRPPSPSS EKAKEKEKKH SPEKRETAQR ICRNVMIYGY CKYQDQGCIY
YHPPAGADPS TPQNSSPVAH APTPSAPTPL AGTPAREKPT LSIEHLAAPV FVPKGLDSSP
RASTPSVPTP SAPTPPVWPS LPSTGLLPRQ DVQVSAQPSH AQLSATASPM AYDDPSHIAL
SAAHAHAQAQ ALTHGILDPH AHAPPVDQSM YLPPRQPLDY NLYAAPLPSI GGNPLYPTHP
HAFFVSDDLR RAIQAKQEAV YAGANGASAP GLPQELGVYH SLIPLPLPAP TAQCPPTQSQ
PSKVYGLPSP VYRATSEVDG NTYCLRRVEG FKLVNQLAFA SMDTWRRMRH PNIVGLKEAF
TTKTFGDNSL IMVYDYHPLS TTLYDEYLSP NPPEPSPASA LANQPPKRRS SPPERILWSY
VTQIANALKA IHSSGLAVRN LDASKILLTG KNRIRLNGCG VWDVLAFDNK TPVQAFQQED
LLSFGKLIIS LTCDFFQPTL PFSLPLEHIS RHYSSDLSNL ILYLISKPAQ GQIKSIDEVV
KMMGPRILNE LDAVQSYADV LENELGAEVE NGRIVRLLTK LGFINERAEF ELDPRWSDTG
DRYILKLFRD YVFHSVGVDG KPILDLSHVL VCLNKLDAGL DERVMLVSRD DQSCLVVSYR
EIKHCIEAAF NELKNAGNNH RVHR
|
|---|
| |