Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ02290 |
Symbol | |
ID | 3254329 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | - |
Start bp | 665222 |
End bp | 667132 |
Gene Length | 1911 bp |
Protein Length | 546 aa |
Translation table | |
GC content | 48% |
IMG OID | 638253386 |
Product | conserved hypothetical protein |
Protein accession | XP_567524 |
Protein GI | 58260228 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.827515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCCATTCGGA ACTGCAGCCT TCGCTATGCC TGACCCATTT TTTCAATCCC AGAAGAAGCG CAAGAGGAAC AATCGTTCAG GTCCTTCAGC ACCTCGCCAG CAAAAGCATC AAGACAACGA TGAAAATCTC TCTTCGGACG CAGAGGGCGA CAATGGCCCC GTTGATATTG ATTTGATGGA TTTCAGAGAG GGTCGGGAGG ATGTAGCAAT GAGTGATGAA GAGTATATCG ACGAAAATGA GACGGCAGCG GAGAAGAGAG TCAGGTTGGC TAAGGGATAC CTTGCCAGAG TTCGAGATGA AGTAGAGGCT GGTGAGATCT TCTTCTTTTA CTGTTTTCCG CTCTGCTAAT ACTGTGAAGC CAATGCGGAT CAGGACTACG ATGCTGCTGA TATTGACAGA GAGCTTATTG CGTCTCGTCT TCAGAAGGAT GTCGTACGTT ACCATTTTCA TATCCGTTCT TTACAGTGAC TGATTGACGC CTACATCAGG CCGAAGCGTC AGGCCGTATA CACCTCTTCA TCACGCCCCA TTTGACGTCC TCAACATTTC ATTTCATCCC CACATCATCG CATCTTCCTA CATCTGCCGC CTTGACCCCC TACTACATCT TCATTTCCAC CAAACGAGGC TCCATCATCC GCCATTCTAC TTCCACTTTA CGTCGAGCCG GTCAGAACTT TGGACATGCC CAGGGTGGAG GAAATGGCCA CAATGGAGAG ATCTTATGTC TGGCAGCGAG TGAAGACGGA AAATGGCTTG TCAGTGGAGG AAGGGATAAG GTGATGGGTG TATGGGATGT CAGTGAAAGA GAGCCCAAGT GGGTGACTGG ATTAAAGGGC CATAAGGACG CTGTCACTGT GAGTTACAAC ATGGTTTCTT GGTGGATTAG GTTGACCCGT CGTATCAGTC GATCGCCCTT TCACCACTTA ACAACCCGTC GTACCACATC CTCTCCGCCT CCCTCTCCCG TCATCTTGCT CTTCATTCCC TTTCTACCCT CTCTGTCATT GACACATTCT TTGGCCATCA AGATTCTATC CCGTCTGTCT CTTCTCTTAA GCCCACTTTG GCTGTCACGG CTGGCTCCCG AGATCGATCA TGTCGATGGT GGAAAGTCGA GGAGGAAGTT CAGCTTGTCT TCAGAGCAGG TGGGAAGACT AGGAAGGATT TAAAAGGTTT AATGCCCGCG GAAAGGAAGG AACGTTTGGG AGGAGGATGG ACAGAGGGTG TTGAGCCGGA AAAGGAGAAG GACAGCAAAG GCAAGGGAAA AGAATTTATG GAAGGTTCAG TTGACTGTGT TTGCATGCTT GATGATCAGC ATTTCGTCTC TGGTGGTGAT AGCGGGTAAG TCTCATTTTC CGCAACTTGT ATCCTGTCTT AACATATCTT GTAGATCTCT TCTTCTTTGG CACACTGGAA AGAAAAAGCC CATCTTCACT CAGGCTTTCG CTCATGGATT CACACCGATC ACTGCAGAAA ACCCTATTTC CGCTCCCCGC TGGATCACTT CCATTGCAGC TTTAAGAGGT ACCAACCTTT TTGCCTCTGG TTCTTGGGAT GGCCAAATCA AATTGTGGGC TATGAACCAA GAATTGAAAT CTTTCTCTTA TGTCGATGTC GAAATACCCG CCAAGGGGTT CGTCAACTCT CTTCAACTCA GTTCTCTTCC TTATGAGACT ATTTCTCATG CTTCTCTTCC GGAGTCAGGA GAAAAGGAGA GTACAAATGC AAAGTCAGAA ATTGTGTTGG TTGCTGCTGT AGGCCAAGAA CCCAGACTGG GTCGATGGAT GAGGGATAAG CTTGTGAAAA ACGGAGTGTT GGTCGCCAGA CTCGAGCTGG ATAGGAAAGG CAAAGCCATG ATGATCTAGA CTTAGTAGAC TTGTATGGAT CTCTGTGTAC ATATTGATTC T
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Protein sequence | MPDPFFQSQK KRKRNNRSGP SAPRQQKHQD NDENLSSDAE GDNGPVDIDL MDFREGREDV AMSDEEYIDE NETAAEKRVR LAKGYLARVR DEVEAANADQ DYDAADIDRE LIASRLQKDV AEASGRIHLF ITPHLTSSTF HFIPTSSHLP TSAALTPYYI FISTKRGSII RHSTSTLRRA GQNFGHAQGG GNGHNGEILC LAASEDGKWL VSGGRDKVMG VWDVSEREPK WVTGLKGHKD AVTSIALSPL NNPSYHILSA SLSRHLALHS LSTLSVIDTF FGHQDSIPSV SSLKPTLAVT AGSRDRSCRW WKVEEEVQLV FRAGGKTRKD LKGLMPAERK ERLGGGWTEG VEPEKEKDSK GKGKEFMEGS VDCVCMLDDQ HFVSGGDSGS LLLWHTGKKK PIFTQAFAHG FTPITAENPI SAPRWITSIA ALRGTNLFAS GSWDGQIKLW AMNQELKSFS YVDVEIPAKG FVNSLQLSSL PYETISHASL PESGEKESTN AKSEIVLVAA VGQEPRLGRW MRDKLVKNGV LVARLELDRK GKAMMI
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