Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ02270 |
Symbol | |
ID | 3254248 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | + |
Start bp | 660252 |
End bp | 662467 |
Gene Length | 2216 bp |
Protein Length | 510 aa |
Translation table | |
GC content | 47% |
IMG OID | 638253384 |
Product | phenylalanine-tRNA ligase, putative |
Protein accession | XP_567522 |
Protein GI | 58260224 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0934821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TCTCAGCTTA ACAGTGACTG TTTTCAAACT ATTCCTACGC TTACCTTCAT CAGTCACAAT GCCTGTGCCT ACCCCAGAAG CCCTCCAACA CGTAATTCTT CAAAATCTCG AAGCGTCTGG CTCCATTCCG GACTCTCGCG AATTGGCGTA CAATGGCAGG CTTTTACAAT CTGCTGAGGA GCAGGGCGTT GTAAGGGCTG TGTTGGACAG TTTGGCGAGC AAGGAGGTGC GTACTACCAA TCAAATTCGA CAGAATTATT GGTAGTTAAT GGATTATTTA GATGGTTGAG TACAAGCAAA TCACCACCAC CACCTACGGC CTTACTGAAG AGGGAGAAGG TATCACTCAA AATGGTTCTC ACGAGTATAG AGTGTGGGAG GTGCTTCCTG TGAAGGGTCA AGGAGAGCCC ATCGGTATTC CTGAACTCAA GGTGAGCAAT TTAATTATCC GCTAAACGTT GTTTGATCGA CGACATGGAA TACAGGTACT GATCATTTGC CCAGAAACGT CTCGGTGACG AAACTACCAA GGTTGGTCAG ATGCGAGCGT TCAAGAACAA GTGGATAGCG AAGGATGGTG CCGGTTTCGT CCGTGCGGTG AGTGCATATG TTGCTAATCG TGAAGAGCGT ATTGTTGATT CAAAGTTAAG GCTGAGGCGC CTGTGGATGA GGCTGCCGTA CAAATGAAGG AAATCAAGGA AAGCGGGCTG GTTGCAGGAG GTGAAGCCGT TGTCAAGGAG CTGCAAAAAA GAAAATTGAT TCAACCCAAG TACGTTATCC ATTCAGTACT GAGAAAGGGG CATACAAGTC TCACATTTTA CAGAAAGTAT ATCCACTATT CTATCTCCAA AGGACCTCAG TTCTCTACTG AAGTCAAGCA ACTGGAAACC GACCTTACTG TTGAAATGCT GCAATCGTAA GTATTATCCA GCGTCCATAA ATATTTACAT AAACTAATGG GGGATAACGC AGAGGTGCTT GGAAAGACGC TTCGTTCAAG CAGTACAACT TCGCCGCTGC TGGCCAACCT ACTGATGGTG GCGCTCTCCA TCCATTGTTG AAGGTTCGAG AAGAGTTCAG GACCATTTTC TTTGACATGG GGTATGTACT TCGACTGAAA AAAAGGATAC TCAATCCCTG ATGGAACGTT GCAGTTTCAC CGAGATGCCT ACGAACAGGT TTGTCGAGTC TGCTTTCTGG AACTTCGATG CCATGTTCGT TCCTCAGCAA CATCCTGCTC GAGAGATGCA GGACACCTTC TATGTTAAGG GTGCGCATAT ATCGAACTCA TGGATAGTAC CTTTAGGGGC TAACAGTCTG TTGCAGACCC GGCCAAAGCC CTCAAGCCTG ATGCCGACTA TTACGAGCGA ATTCGAAAGA TTCACGAGGA AGGAGGTTAC GGATCCATTG GTTACCGAGC ACCTTTCTCT CAGGAGGAGA GTGAGAAGCT CTTGTTACGA ACACACACCA CTGCTATCAC TACCGACATG CTTTACAGGC TCGCCAATCA GCCCGGAGGG TTCAAGCCGG CGAAGATGTT CTCTATCGAC CGAGTTTTCA GGTAATATCT ACCATCAATT GGATGTTCAA TTGCTTATAA TTTTTGTAGA AATGAAACTG CCGATGCTAC CCATTTGGCA GAGTTCCACC AAGTGGAAGG CCTTGTTGCG GACTACGATA TCACTCTCGG CCACCTGCTT GGTACGTTCT CCCTAAAAAA TGCGCCGTCC GCTCCATTAA TATGGTATAT CTAGCGTTCA TGCAAGAGTT CTTCTCCAAG ACTGGTAACC ACAAGCTGAG GTTCAAGCCC GCATACAATC CTTACACTGA GGTACGCCTA TTTTGATAAC CTTGTAAAAC GACCCTCACA CGATTATAGC CCAGTATGGA AGTTTTCTCA TACCATGAAG GCTTGGGCAA GTGGATTGAA ATTGCCAACG TATGTCTATC GTTGTTTATA ATATACATAA CAGCAGCTGA TGTGAAGCTC CAGTCTGGTA TCTTCCGCCC CGAGATGCTC GAGCCCATGG GTCTTCCCAA GGGTGTCCGA GTTCTTGGTT GGGGTATGTC TCTGGAACGC CCTACTATGA TCAAATACAA GATCCAAGAT ATCAGGACGC TTGTCGGACA CAAAACGGAT TTGGATCAGG TAAAGAAGAG GGCGGCGGTC AGGTTGGAGA AGGGCGATGA CTAGATGCAT GTGGATTTCT TGGCGG
|
Protein sequence | MPVPTPEALQ HVILQNLEAS GSIPDSRELA YNGRLLQSAE EQGVVRAVLD SLASKEMVEY KQITTTTYGL TEEGEGITQN GSHEYRVWEV LPVKGQGEPI GIPELKKRLG DETTKVGQMR AFKNKWIAKD GAGFVRAAEA PVDEAAVQMK EIKESGLVAG GEAVVKELQK RKLIQPKKYI HYSISKGPQF STEVKQLETD LTVEMLQSGA WKDASFKQYN FAAAGQPTDG GALHPLLKVR EEFRTIFFDM GFTEMPTNRF VESAFWNFDA MFVPQQHPAR EMQDTFYVKD PAKALKPDAD YYERIRKIHE EGGYGSIGYR APFSQEESEK LLLRTHTTAI TTDMLYRLAN QPGGFKPAKM FSIDRVFRNE TADATHLAEF HQVEGLVADY DITLGHLLAF MQEFFSKTGN HKLRFKPAYN PYTEPSMEVF SYHEGLGKWI EIANSGIFRP EMLEPMGLPK GVRVLGWGMS LERPTMIKYK IQDIRTLVGH KTDLDQVKKR AAVRLEKGDD
|
| |