| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ01870 |
|---|
| Symbol | |
|---|
| ID | 3254232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | + |
|---|
| Start bp | 548234 |
|---|
| End bp | 549686 |
|---|
| Gene Length | 1453 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638253344 |
|---|
| Product | mitochondrion protein, putative |
|---|
| Protein accession | XP_567360 |
|---|
| Protein GI | 58259900 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.551385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAGACAAACA GCAACTATGC CCTTCAGAAC TTTCATCCCA GGCCTCTCCC TTCGCCTTCG
TCCACAGGTC AGGCTGCAAT CGCCCCGTTC AACGAAGAGC TATACCACAG TTGAAGCCCA
CATCCCCCAC GGCCATGCTC ACCATGCTCA TCGTGCTCAG CGAGTCCCAT ATAAGAAGCC
CTCCGCGCTG AGAAAGTGGG GTGTCCGCTT TGGTACGTTC TCTTTCGATC CTCACGTATA
TCGAGCTGAC TAGGCATCAC ATCTTCACCT ATAGCCCTGG CCATTGCCTT TCCAACTACA
TACATCCTCG GAGCTGCGTT TCCCCCGCAG CTAGTGCTCT TGATCTTCCC CCGCTTCTCG
CCCCCGCCTC CGCACAAGGA CAGTGCGAGG GGCAAGGCGC ACACGAATGA CGTGGAAGGG
TGCATGCAGG GGCTCCAGCT GGTGGAAATG ATGCGAAAGG AGATCCAGGG AGGCGCAGAA
TGGTACGAAA CTAGTGGGTC TGCGTGATGT GCCTGGCAGC CAAGGAACGC TAGGTCAGCT
GACAAGGAAA CCAGGACCTT ATGACAAGTA CGATCCTCAG AAGGTGCACA ACTCGCTCAC
TGCCGGCACC CTCCGTGGTC CCGGTAAACT CGCAATCCCT CCTATTCTTT TTGCCAAGAA
GGATGAATCA GAAGCAATCG GTGTGTTTTC ATCGACCACG GGATCGCCGT GATAGTTCTT
GCTGACAAAA GCCTATGGTA GCCATCATCC ATCTTGGTAG AGCACTCTGC GGCCACGACG
GTATCGTACA CGGTGGTCTT CTCGCTACTG TGATGGATGA GACGCTTGGC CGCAACGCCC
TCCTCAACCT TCCGTCCCGT ATCGGTGTCA CTGCAAACTT GAACATCAAC TATCGTTCCC
CTTGTATGGC TGATCAATTT GTTGTCGTGA GGACCAAGGT GGTCGAATTG AAGGGAAGGA
AATGTGTCGC CGAAGCCAAG ATGGAAACAC TGAGCGGGGA GACTGTGGCT GACGCCAAGT
GGGTACTGCG TCGTGAATTG AGGTGTATCT CGGCTGATGA ATCGCAGGGC GCTCTTCATT
GAGCCCAAAT GGGCCCAGTT CCTTGCTTCC TCTGGAGTCA CCGAAGCGAT GGGGCGACCA
ATCCCTCAGC CTGAAAATGC TCCTGGACTG ATGGATGGCC AAGTTGAGAA GATTGTGTAA
ATGTAGAAGC TTGTCTTTGA AAGCTTGCCC AAAAACAGTT GTGTGCAAGG ACTTTATCAG
GCGACAATCA AGATTGTAGC GTCCTAGAAT AGAGGCAAGT CATACTGGCT CACATAAGAG
AACAAGACAA TGTAGAAGCT TTAGAGCTTC GGTCGTGAGA AGCCATTGGT GATGCATATT
ATCTCACCCA GTATACTAGA TACTTTTGAT ATCACTTCTT TTCCCTTGGT TTGCCTAGTG
TATGTACATC TGC
|
|---|
| Protein sequence | MPFRTFIPGL SLRLRPQVRL QSPRSTKSYT TVEAHIPHGH AHHAHRAQRV PYKKPSALRK
WGVRFALAIA FPTTYILGAA FPPQLVLLIF PRFSPPPPHK DSARGKAHTN DVEGCMQGLQ
LVEMMRKEIQ GGAEWYETRP YDKYDPQKVH NSLTAGTLRG PGKLAIPPIL FAKKDESEAI
AIIHLGRALC GHDGIVHGGL LATVMDETLG RNALLNLPSR IGVTANLNIN YRSPCMADQF
VVVRTKVVEL KGRKCVAEAK METLSGETVA DAKALFIEPK WAQFLASSGV TEAMGRPIPQ
PENAPGLMDG QVEKIV
|
|---|
| |