Gene CNJ01790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ01790 
Symbol 
ID3254130 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand+ 
Start bp518517 
End bp519744 
Gene Length1228 bp 
Protein Length312 aa 
Translation table 
GC content47% 
IMG OID638253337 
Producthypothetical protein 
Protein accessionXP_567354 
Protein GI58259888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACAA AACTCAGGGT CGGATGGCAC CGAGAGCATT TCCTCTCTCC TCTTCTTCAA 
TTTGTCGAAA AGGACAAAGG GGAGACAGTA GAGCTGATTG AGTGCCCGGG TGGGACCGGC 
GAAATGCAGG TATGTCTCGG TGACAGTAAT ACTCCAAGCA TTGACGAACT GATGAATATT 
GCAGGTCAAG TTAAAGAACG GGGAGATTGA TCTCTGCATC GGTAAGCCTG GAACATTGAG 
TCGTAGGATT GTTAATAATA GCTTGAAGCG CTTACCGACG CTCTCATTGC GGGTTTGGCA 
AACGGCCAGA CGTCTTACAA GATTGTCGGG CGATATATTG CGTCTCCCTT GCGATGGTAA 
GCATGCATTT TCTATTATTC TGAAACTAAA CTGGTACATA GGGCCATAGT TACAGGTAAG 
AACAGCCAGT ACAATTCTGT AGACGACCTC AAGGGCACAA CTTTTGGGAT TTCTCGCTTG 
GGAAGGCAGG TCTATTATCT TGCCGATCAT TTAGAATCGG CTAAACATTG AGTGCAGTGG 
CTCTCAAGTT ATGGCCTCAG TCTTATCATT GCAGCAAAAA TGGTCCGAAG AGGAGCAGCC 
AAAGTTCAAG GGTATGTCAT CATTTTCTGT TGGATTGTTC AGAGCTTATA TTTTTCAGTG 
AACGGGCAGT TCAAACCTCT CCGGGACTCT GTCAACTCTG GCGAAAGTAA GGATATGTGC 
CAAGCGAAAC ATTATATGCT GATGTCAAAT AGCTTCTGTC TTCCTTTGGG AATGGTTCAC 
CACTAAGCCC TACGTGGACT CTGGTGAGGT TCGCTTCATC GGTTCCGTCT ATAGTATGTT 
ACATGATGAC GTGTGAGGGC TATGCTGATA GTTCTCAGCC CCTTGGCCTT GTTGGCACAT 
CGCTGCTTCC CCTTCTGTCC CGTCTTCCAC CATCAAGCCT TTCCTTGCTT CCCTTCAGCC 
GTATGTGCAG CATTTCAACT CCCCCGAAGC GCGCACCTCC GAGGACATTG AATTCGTACA 
CAACTTCTTC GGGCACAAGA AAGAAGACGT TGCAGAGTGG CTTCAAAGTG TAGAATGGGA 
GCAACGGCTG GCAGAAGTCA AGGAGGATGT TGTAAAGGGG ACTTTGGCAG TGTTAAGAAA 
GGCGGGTGTT ATTCCCGAGG GCGCGGAGAA CATGAAATTG GAGGACATTG TCAATACAGA 
AGTTGCTACT ATTGTTTGAG TACAATGC
 
Protein sequence
MSTKLRVGWH REHFLSPLLQ FVEKDKGETV ELIECPGGTG EMQVKLKNGE IDLCIGKPGT 
LSRRIVNNSL KRLPTLSLRV WQTARRLTRL SGDILRLPCD DDLKGTTFGI SRLGRQWLSS 
YGLSLIIAAK MVRRGAAKVQ GYVIIFCWIV QSLYFSVNGQ FKPLRDSVNS GETSVFLWEW 
FTTKPYVDSG EVRFIGSVYT PWPCWHIAAS PSVPSSTIKP FLASLQPYVQ HFNSPEARTS 
EDIEFVHNFF GHKKEDVAEW LQSVEWEQRL AEVKEDVVKG TLAVLRKAGV IPEGAENMKL 
EDIVNTEVAT IV