Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ01780 |
Symbol | |
ID | 3254031 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | - |
Start bp | 516457 |
End bp | 518217 |
Gene Length | 1761 bp |
Protein Length | 536 aa |
Translation table | |
GC content | 48% |
IMG OID | 638253336 |
Product | conserved hypothetical protein |
Protein accession | XP_567353 |
Protein GI | 58259886 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTTGTATCCA TTTTCATAAC TAAATAATTG GAGGCTAAGA TGCACTCAAG CGTCCTCCTA TATTTTCCTC TACTGCCCCT ACTACCAGCA CTCGCAATCA GAAGCGGCCC GCATCAGCTA CGAGATCTCT ACGCCTATCC AAAGTACCAA GTCCAATTTC TCAACGACTT GCCCGTGTCA ACCAGTGATG CTAAGAGAAT AAAGGAAGTG GGCGTTGGTA GCGAAATAGA GTGGCTAGAT ATGAAACCTG GGGACAGAAG TCTCGAGGAT GGCACTAAAA GGGTATGTAT GCTTTAACAT GATTCAAAGA ATTAAGGCTA ATTTGTATTA AAAACAGGAG AGGCTAGAGT TGATTCCAAT GAGCTTTGTT CCGGCGGGCC ACGAAGAAGA TCCATCTCCC TACGAGTATC TCTGCTTAAT GCCATCAAAT AATAGCACCG CCTCACAAAT GGCAAGAATA GATCAGCTTG AGGAAGTGGA GGACGAGTTA GACCCTGTTC AAGGGTGGAA AGCTTTAGCT CACCTAGACG GGAAATGTCT TTACTCAAAG CAAGGATGGT TTACTTATGC GTGAGTGACC TTTCAAAGCT CTTTTTTTTT CGGCCTGACT CTATGGTAGC TACTGCCACG ATTCCTACAT TCGACAGTTT CGGGCAGCTG CTAATCCCCA TACCCACCCT ACGCAGGGCT ATGTCCCTCA GGAAGACCCC AAATACGAAG GCTACACTCT CGGTCGCCCC TACCCGGTAT CCAAGTTCAA AGGATCCAGG GTGAAAGCGA AGGGCGGTAA GCCAGGATCT CCTGCCAAGG CAGAAGACCG ATCAACTGCT GTCGAAACTA CTGCCAATGC TCCCCATACT CAATCATCTC CTTCCGTGTC TTTTGGCCTC GGCGCTTCTT CACGTTACCT GGTCCAACGC TGGAGTGATG GTACAAGATG CGACAAAACT GGTCGTCCTC GAGAGATTGA GGTGCAGGTA CATTGCTCAA TGACCTCTGG GGATATGATC TACATGATTA AAGAGGTTGC CATATGCCAA TACGTTATCA TCATTCATTC ACCACATCTG TGCGGACTAC CTGGTTTCAA AGCACATGAT GCCGAGGTTG AACCGGCTAA CGTAATGTGC CGACAGGTGG TGGACGATGA GGAGTGGGCG AAATGGGAGA ACGAAGTTAG AGATGGAACA GCAGGCGCGA ATGAACCTCA GCCTCAGGAA ATCGAAGAGG GGAAACAGAC GAGAAGGTTA GAACAATCAT CGTTCTCTAA ATGGCCTGGA AAAGGGCAAC CTCAGTTCAG ATTCGGACTT GCAGCCGCAA GAGAGCGCCC AGCTGGAGAT GAAGTCAGCC ATGAACAGTC CGGTGTAGAT GAAACGGGAG AAACGGGAGA CCAAGCCAGC GAGTCCATTC CGGCTGATAT TATCTTTGGT CTTGATATGG ACGAGGATAT GAAGAGCATG CTCAGGCGTG CTGTTGGATT ACTGGCAAAG GAGGCCAGGA GTGAAAAGCG AGACAATGGT GATGAGGAAG AAGCAGACGG AGATGAAGTT GTCTTGATCT CATGGGACGA AGATGAAAAC GGGCGGCCGG TGCTGCTGGA AGCAGATATC CTCTTAAAGG ACGAAGATGG AGAGATTAAG CTGGAAATGG GTGCAAGCGA AAAGGATATG CTTAAGAAGG TATTGAGAGA TTACATGCTT AAGGCAAACC ACGAAGAAGA AGAGCAAAGA AAGCGGGTTG TCGATGAGTT ATGACTTTCA T
|
Protein sequence | MHSSVLLYFP LLPLLPALAI RSGPHQLRDL YAYPKYQVQF LNDLPVSTSD AKRIKEVGVG SEIEWLDMKP GDRSLEDGTK RERLELIPMS FVPAGHEEDP SPYEYLCLMP SNNSTASQMA RIDQLEEVED ELDPVQGWKA LAHLDGKCLY SKQGWFTYAY CHDSYIRQFR AAANPHTHPT QGYVPQEDPK YEGYTLGRPY PVSKFKGSRV KAKGGKPGSP AKAEDRSTAV ETTANAPHTQ SSPSVSFGLG ASSRYLVQRW SDGTRCDKTG RPREIEVQVH CSMTSGDMIY MIKEVAICQY VIIIHSPHLC GLPGFKAHDA EVEPANVMCR QVVDDEEWAK WENEVRDGTA GANEPQPQEI EEGKQTRRLE QSSFSKWPGK GQPQFRFGLA AARERPAGDE VSHEQSGVDE TGETGDQASE SIPADIIFGL DMDEDMKSML RRAVGLLAKE ARSEKRDNGD EEEADGDEVV LISWDEDENG RPVLLEADIL LKDEDGEIKL EMGASEKDML KKVLRDYMLK ANHEEEEQRK RVVDEL
|
| |