Gene CNJ01640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ01640 
Symbol 
ID3254297 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand- 
Start bp480142 
End bp481325 
Gene Length1184 bp 
Protein Length332 aa 
Translation table 
GC content50% 
IMG OID638253322 
ProductL-ornithine transporter, putative 
Protein accessionXP_567341 
Protein GI58259857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0922433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCAA AACTTTTCGA GCACCCTTTC GACTTGAGTA GGCGCCGCTT TTCAACAGAT 
TCGTAGGGGA GAAAATATTC ATATATTGTC TTAATAGTAA AAGTCCGACT TCAATCTCAG 
CCCACGGACC AAGCGCTCAA ATTTACCGGC CCGTTGGATT GTTTCAAGCA GACAAGCGCA 
AAGGAAGGAT GGAGGGGTCT CTATAGGGTA AAGGTCTTCA CATAAGATCT ACGTGGCAAT 
GTTGACAAAT TCTAATAGGG TATCTCTGCG CCTATAGTGG GAGCTGCTTG CGAGAACGCC 
ACCCTGTTCT TGGCTTATAA CAAATGTAAA GAGGGAATAT ATCTCTTACG GCCTGACGGC 
AAAGGAAAAG ACAGAGAGTT CAACATGAAG GAAACTGCCT TAGCCGCTGC TGGAGCAGGA 
TCTATCGCGA GTTTCATCCT GTAAGTGCTT GAAGGAGTAA TGTATAAGTG CATCTAACGT 
CTGTTATAGA ACACCTATTG AGCTCATCAA GTGTCGAATG CAAGTGCAAA TGCTTGCTCG 
CGAAGGCGCT TTTGGTGCAG CCCCCGTTAC CGTCCCTGCC CCTGGTATTC ATCCCTTTGC 
CACGACTCCC AACCCTTCTG TTCCCCATGT AGCCCCACAA CTACGAGCAG CAGCACCTCT 
TGGTCCTATC GCCCTTATTA TCGATACTGT TCGTCAATCA GGCATCCGAG GCCTATGGCT 
TGGTCAAACG GGCACGCTTC TACGAGAGAC AGGTGGCTCG GCTGCGTGGT TTGGGTCTTA 
TGAATGGGCC GCTCGGTGGT TCATGGCTCG ACACCAAATC ACCATTGGTC GCGAGCGAAA 
AGCTACCAAG TCTGACCTGA CAGCAGTGGA GCTTATGGCT GCTGGTGCCC TTGCAGGCGT 
GTCCTACAAT GTCGTGCTCT TCCCTGCAGA CAGCGTCAAG TCTTCCATGC AGACATCTGC 
GGAACTTAAC CCGGACAAGC CACCGCCTGG GTTCTGGCCC ACCGCTAAGA AGATTTGGAA 
ATCCAGAGGG ATCAGGGGGA TGTACGCTGG GTGTGGTCTG ACAGTACTGA GGTCTGCGCC 
TAGCTCGGCC ATGATTTTCT ACATTTACAC ACGATTGGAG AGCGAATTTG GTGGATTTTT 
GAACCAAGAT ATTGCATAGA TGTGTAACAT TGTGACGGAA AGCC
 
Protein sequence
MVAKLFEHPF DLIKVRLQSQ PTDQALKFTG PLDCFKQTSA KEGWRGLYRG ISAPIVGAAC 
ENATLFLAYN KCKEGIYLLR PDGKGKDREF NMKETALAAA GAGSIASFIL TPIELIKCRM 
QVQMLAREGA FGAAPVTVPA PGIHPFATTP NPSVPHVAPQ LRAAAPLGPI ALIIDTVRQS 
GIRGLWLGQT GTLLRETGGS AAWFGSYEWA ARWFMARHQI TIGRERKATK SDLTAVELMA 
AGALAGVSYN VVLFPADSVK SSMQTSAELN PDKPPPGFWP TAKKIWKSRG IRGMYAGCGL 
TVLRSAPSSA MIFYIYTRLE SEFGGFLNQD IA