| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ01450 |
|---|
| Symbol | |
|---|
| ID | 3254265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | - |
|---|
| Start bp | 421085 |
|---|
| End bp | 423373 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638253301 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_567324 |
|---|
| Protein GI | 58259823 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATCCCA CAATAATTTT CGTGCACAAT TCAACTTCAT TGTTTCCCTC TACTTAAAAA
CTATATACAT CACAGTGGAA AAGCGCGCCG ACGTCATGGA AGCCTACCTC CAGTATCGGG
CTTTCACGCC GAGCTTTAAA CCTACCCACG CTCCTATCGT CGAAGGCAAA GAAGAAGAGG
CTCTCAAAAC CCTTGCCTCT TCTCCTTTGA TCTATGTCAC GTTCGACGAG AACGACGCTC
GGAACCCTCA AAATTGGTCC AAAACCTACA AGACCTTTGT AATTGGGCTC TTGGCCTTCT
TAACGCTGTC CTTAACGTTT GCTAGCTCTG TATCCTCTGC TGCAGAGCAG GGGATGATGG
AGGAATTTGG GTGCTCGCAG ATCGCCGCAA CCGCCGCGAC TTCGATGTTT TTAATAGGTA
TGGGTGTAGG TGCGATGCCT ATGGCGCCGC TTTCTGAGCG TAAGTGTGCT TTATTTATCA
AACGAAGTAG CAGAACTTCA TGCATAGCAG AATGGTGGAG GACGCTCTCA ACCCTAAACG
GCTGCATGCT CCTTTTTAAG ATTGATGCGA CGGAAGGGTG TTTCTCATGG CGTCAGGATT
ACACAGGCGG GAAGTGTACC TCATATATGT TGCATATTAC TCTTTCGTTC TCTCTACGGC
CATAGTATGG TAGAGACTGA CGCATGGCAT AGTATATGGA CGTCTCCCAA TCTACCTCAT
CACTATCCTC CTAGCGACCG TCTTTGAAAT TGCCTGTGCT GTTGCCCCCA ACGTCCCAGC
TCTCCTCATC CTTCGATTCA TCGCAGGGGT CTGGTCTACT ACACCCTTAT CCAATTCAGG
TGGGTCACTG AACGATGTGG GAGACCCTGT TCTACGTACC ATCGCTCTTC CCCTCTTTAC
AACTGCTGGA TTTACTGGGC CTTGCTTGGG ACCTATAATA GGAGGATTTT TGGCCGAAAA
TGCGAATTAC GGTTGGCGTT GGTGTTACTG GGTAACAGCA ATCTGGAATG CGGTCGCTTT
CTTATCATGC TTCTTCTTCA TGCCAGAAAC TCTAGCCCCT GCTTTGCTCA AGTTCAAAGC
AATTAATTAC CGGAAGGCCA CCGGCGAGCA TACATGGAGG GCACCCATTG AAGACGAGAG
TTTGAGGAAG TTGACTGTCA AGTACTTGCA ACGCCCCTTT AAGATGCTGG CGATAGAACC
TGTTGTCCAA TTCTTTGTGG CATATCTACT CAGTATGTGC TGGATCATTT CCTGCTGGGT
CGGCTTCTTT TGCTGATGTT ATTATAGTTG TATATATTGT ACTTTACGGT TATTTTGACG
CCTATCCCAT TATCTTCGGC CAGCACGGCA TTTCAGGCGG TAAAGGAGGG CTTATGTTCG
TGCCTGTCAT GCTAGGCTTT CTGATTCTTC TCGGTATAAA CTTCATCCAC TTTGAACGCT
ACAAGGGATT GGCTGAAGAT GCGAAAAAGG GGATTGAGAG GAGAGGTATA CATGAAGGTC
GAGTTGAGCC AGAAGAGAGA TTAGTGCCCC GTAAGTATCC GCAACAATGC AGTAGACCCT
GCTTACGGGA CCGTCAGTCA TGGGTTGTGC CATCTTTTTC CCAGCAGGAA TGTTCTGGTT
TGCTTGGACC TCTGGTGTTC ACTTTAACTT CTGGGTTCCC ATGATGAGGT AAATGGTGTT
TTCAGGTGTG CTGATATGTG ATTGACACTG CATCAGTGGT TTAATCTTCG GTATCGGCCT
TTTGTCCATC TTCCAAGGAT CTACTCAGTA TATGATCGAC GCCTATGGGC CTATGGCTGC
ATCAGCTGTG TGTATTGCCC TTGTCTTTCT TACCTGAATG CATCTAACAA CATTTCGTAG
CTTGCAGGTT CAACACTTAT CCGATATGTT GGTGCCGGTT TGGTCATTCT TGCCTTCCCT
ACCATGTACA ACAACTTAGG TGATCAATGG GCTACCTCGT AAGTTATATT TTGTAGAAAA
GAATGAAGCA ATGAGTGTAC TGACTAGCAA ATAGTCTCTG CGCTTTTTTG GGTCTGGCAC
TGACTCCAAT TCCGTTTATA TTCTACTTGA TCGGTAACTT GAGCCGTCGC AGGAAATCGA
TAATGGCTAA TTGGTATTTG CCCAGGTCAC AAAGTGCGAT CGAAATGCAG ATTTACCGTC
CGCTATTAAT ACCGTCTATA AAGACAACTA TATATAACAA TACTATAATT CAATGGTCTT
AATTGAAACT CCCGACTGAA GAGTAGAATC GTACTGTATT CCTACGTATC TATACCATAT
ACTCATTGA
|
|---|
| Protein sequence | MEAYLQYRAF TPSFKPTHAP IVEGKEEEAL KTLASSPLIY VTFDENDARN PQNWSKTYKT
FVIGLLAFLT LSLTFASSVS SAAEQGMMEE FGCSQIAATA ATSMFLIGMG VGAMPMAPLS
ELYGRLPIYL ITILLATVFE IACAVAPNVP ALLILRFIAG VWSTTPLSNS GGSLNDVGDP
VLRTIALPLF TTAGFTGPCL GPIIGGFLAE NANYGWRWCY WVTAIWNAVA FLSCFFFMPE
TLAPALLKFK AINYRKATGE HTWRAPIEDE SLRKLTVKYL QRPFKMLAIE PVVQFFVAYL
LIVYIVLYGY FDAYPIIFGQ HGISGGKGGL MFVPVMLGFL ILLGINFIHF ERYKGLAEDA
KKGIERRGIH EGRVEPEERL VPLMGCAIFF PAGMFWFAWT SGVHFNFWVP MMSGLIFGIG
LLSIFQGSTQ YMIDAYGPMA ASALAGSTLI RYVGAGLVIL AFPTMYNNLG DQWATSLCAF
LGLALTPIPF IFYLIGHKVR SKCRFTVRY
|
|---|
| |