| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ01270 |
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| Symbol | |
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| ID | 3254285 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 357952 |
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| End bp | 361912 |
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| Gene Length | 3961 bp |
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| Protein Length | 1175 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638253284 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_567505 |
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| Protein GI | 58260190 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00191487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCATGCCCGG CTCACAGCCC ACTATGTCCC ATATCCAGGT ACCATTCCCC TCGGCATCCC
CCCTCAAAAG CCCCACCACC CTTTCAACAG CTTCCTCAGA CGATGACTAT CCTACCATCA
GCTATCCAGA TCACGGCGAT GAGAGCACTA ACAACACTCC CAGAGCCAGC TCAGGCAATA
TATCATCACA GCCTTCCAGA GGAGTTTCTT CAAGCTCAGC CTCTGTGCGA GATACTCTTC
TACCTATACA ACCCATGCCA GACTCTTTAC TACTCAAACA CACCTTTTCA GCTCTCGACG
GTTCAGCCAC CACTCTCAAA CGTTTTTCAA AATCAGTCCT TGCCTATGCT GCCGTCGTGC
ATACTCTGTC AGAGCAGCTT GAGAAAGCCG AAGATGATTT ATTTGGTGCC GTCGGCGAAT
TAGGTCTGTG GCTGGAGACG GGATACGGTG TGCAAACAGA CAAACAGAAA GGCGGCGTCT
GGGACCAAGA CGGAATTCGG AAAGTGAACC GAGAAAAGCG ACGGAGAGAA AGGGAAGAGA
TGAACGTGAG AGTTGAGCAG GGTTTGAAAG ATGTGAAGGC TCATCTGAAA AGGCGAGGTC
TCGCTGGTGG TGGTGCCCAA ACCAAGTACG AGGTGTGTTG AATTGCTTTT GATGGCTTTC
GGTGATTAAC ACAAAGCAGT CATCAGCCAA GCAATTCTAC CATGCCACAG GTGTCTATCT
CGCCCCACAA TCACCTACTC TTCCCTCACA TACTCAACAA ACCTCTGGAT CTTCGGCCCC
TGCGTCTGGC AATCTTCAAC CTGCCCATGA TATGGCCCAA TCTGTGCGAC TTGCCCAGTG
GGATCTCACT CGGTATACAC ACCATTCTCT TTTACTATCT GCCGTCCCAC CCAGCTCGGA
AGAGTGTTTG AACCTCCTTG TCGCGCTTTA CGGTTGGGTA GCTAGTATGC TGAACGAGCA
GCCTGGTTTT GTTAAGGAGA TCGACGAAGA TGCCCTGGCT GCTATACGGC AGTCATCACA
TGTACGACCC CATCAGCTTC GCAGATCATC CTCTCCTGCA CAATCTAATC AACAATTGAA
ATCTACTCTT TCTTCTTGTT TATCACAACT CTCCAACACC CGAGCTAGTT TGCTTTCAGC
GTGGGCTCGA AGGGATGACC AAACTCGACT CTTGCAAGAG GCCGCTGCAA AACGGCAGAG
CGAATACGAA TCGATATGCG CTGATGAGCC ATCTGGCGCC AAACTGGGGG AAGGTCTTGG
ACTGGGGAAT ATCGGCAGTG GAAATGCAAT GGCCAGTGTC TCCTCTTCTG GAGTGGAACA
CAAGAAGCAA AAGAAACACA AGTTTGGTCG GTCTATGGGT GGTCGTCTAA AAGATTTCCT
TTCTTCTTCT AGCAGCTCTC ACTCTGTCGC TGCCATTTCT CCAGTATCCG AAAGACCGTT
TAGAGCCAGT TTTGATGGCT ACATGCGGAC TGACAGGCGG AACGAGGGTG TTACTCGAGT
GTCAACAACA GGCATCGTCA AGCTGCCTAC CCACTCGGAA GTGCTTGATC AACCAACCAT
AGTCACTTCC CCCACCTTCA TCTCCCCTAC CACCGCCTCT ACACCTGCAA TCATGAATTC
TCCACTCAGC GCGTTTACCC CGACGTCACC CACACTTACC GTCCCATACC CTTCAGGAGC
CTCCAGCATG CCTCCTCCAC CGCCCCCCAA AGAATACGCC CGTCCTTATA TGCCATCCCG
ACATTCTGTC CATATGCCAA GTGGTGACTA CATCTCTCCC TATATCGCCT CTACCTCGGC
TTCTGGGTCA AGTGATTATG ATGCCTCTCT TCGTCTTCCT TCGCCGTTTG AGAGCAGTCC
CGACTTGCGT CTCAGTGTCG GCTCGGGCGA TAAAGTGAGA CACAGCATGG ACAGCTCTCG
GCCCGTAAGC GGTACTAGCT ATTCACGCAC CAGCCCCAAC CCGAGTATGA CGTCCGTCTC
CCCGCACCCT GTACCGAAGA TTGGTCTCGG ACATCCGAGT GCAGCTGCTA TCCTTGGCAC
AGTAAATGTG GGTGTCGGTG GTGTGGGAGG GCTAGGCGCA GGAGGAGACG AGGATGAATT
GAGAGAAGAA GCTGGACGGA AGAAGGAGGG TGTTCTATGG GGATTAGGGA CGTGGGAAGG
ACTGACAAAA GGGAGTGGGT CAAAGGGCAA ATGGGAAAAG TACTGGGTCG TTTTGGACCA
TTCAAGTATC TACGAAGTAT GTTCTCTTTT TCCCAAAGTT GAATCGAATT CGTGATTGAC
CGATGAAAAC GCTAGTATCG GGATATTTCC GGTCCGCCAG GAGGAGCGCA TGCGGTGATT
GACCTCAAAT TTGCTAGTGT ACGTGAGGGA AGAGGGACGG ATAGGCGGTT CGGTAGGTTT
ATTGATGTTT CATTTCATGG ACTAGGCTTA CACACTGCGA TTTAGTATTT GAGATTGTTA
CCCCTTCACA AGGACGACGA TTATACCAAG CTACCTCTGA CCAAGAGATG AAGGTATGTC
TTCCACTAAG CTTTTGTAGG CTTTTACTGA TGCAAATGTT AAGCAATGGC TCTATGCCAT
CTGCAATGCT ATTGAATCAT GTATCAACGG TACTTCCACC GTTCGCACTA TCGATCAAGC
CAAAGCTCGG GGACCATCAG GTGCATACGA CGACCACGCT CTCCCCGCCC GCTCCAAATA
CAACCTCGGA TTTTCCGCCC GCAACCTGAG TCTCGGCTTT GTTCCGCTCA TCCAGACTGG
CCGTAAGTCA ATGCCCTCTA CACCTGTAGA AGCGACAAGT GGAGAAGCGA GGATTAGGAA
GACGAGCTTG AAAAAAGTGT TGAAGCAGAG TGGAGAGAGA TTTACGAATG CCATGACCGG
CGCGACAAGT AGCATCAACT TAGCGGCGCA CATGGCTGAC CAACCGTCCG AAAAGGCGAA
ACGCAACTCA TTCGGTGGCC TTGAGGTTCC TCGACCGACG TTTGGGAGGG CTGGCAGTCG
CCAAAGTTTA CCTGCCTCTG CTCCTGATAG ACAACCTCTT CAGCAACAAT TCAACCAGCT
TCTGCCTCCG ATTAGCACCC CTCCTGGAGC CAAATCTTCG TGGGCGGATA ACGATATCGA
GAATCGTGTA CTGGAAATGG CTGGTCTCGG TCTAGGCGCC TCACCTCCTT CCCGCTCCGG
CGGCGGACAC GGGGTACTGT CTCTTGCCGA AAGCCCAAGC AGTGCCAAAC GCCGAGTTAA
GAGTGAAGCT ATCAGGAAAC CTCACGCAAA CAAGCATAAG CTGGCTCAGC ATCAAGGTGG
TGAAGGGTTG ACAAGATCGA AGAGTGATGA TGGGTCGACA ATGTTGGCGG AGGATTTGGC
CGATGATAAA AAGGAATTGA AGAAGATTGC ATCTGAAGAA GGGAACGCGA GATGTGCGGA
CTGTCATGGT GGGATGAAGG CGAGTCGATG GGCAACTATC AGTGAGTCCT GTCAGACCTG
CACAATGGCG GATGTTAAAT TGACACTCTT AGGCTTGCAC AATACTCCTA TCGTGCTCTT
CCTTTGTATC CGCTGTATCG GTATACACAG ATCGCTGGGA ACTCACATTT CCAAAGCAAG
AAGTGTCGAC ATGGATAACT GGACCCCGGA ACAGATCGCT CTAGCCCGAG AGTGGGGTAA
TATTCGAGGG AACGCTGTAT GGGAAGCAAC CAGAGGGGAT GAAGAACCGA GACCGCTAGG
GCCGGAAGGG ATGAAGGAAT TTGTCAAACA AAAGTATGTT GAGGGAAGAT GGTTGAGGCC
AGATGATAGA CTGAGGTTTG GGTTTGGTCC CAAAGTTTAA TGGAGGCGCG TTTTTATGAC
ATTTTCAGAT GGCGATTAAT GGAGATGAGT ATCTAATGGA CTTTTGTTTT GATTGACATT
CCTCATTTAT AATATCTATG ATCATCATGT AGTAAGAAGA GAAACGACGA GATGACAGCT
A
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| Protein sequence | MPGSQPTMSH IQVPFPSASP LKSPTTLSTA SSDDDYPTIS YPDHGDESTN NTPRASSGNI
SSQPSRGVSS SSASVRDTLL PIQPMPDSLL LKHTFSALDG SATTLKRFSK SVLAYAAVVH
TLSEQLEKAE DDLFGAVGEL GLWLETGYGV QTDKQKGGVW DQDGIRKVNR EKRRREREEM
NVRVEQGLKD VKAHLKRRGL AGGGAQTKYE SSAKQFYHAT GVYLAPQSPT LPSHTQQTSG
SSAPASGNLQ PAHDMAQSVR LAQWDLTRYT HHSLLLSAVP PSSEECLNLL VALYGWVASM
LNEQPGFVKE IDEDALAAIR QSSHVRPHQL RRSSSPAQSN QQLKSTLSSC LSQLSNTRAS
LLSAWARRDD QTRLLQEAAA KRQSEYESIC ADEPSGAKLG EGLGLGNIGS GNAMASVSSS
GVEHKKQKKH KFGRSMGGRL KDFLSSSSSS HSVAAISPVS ERPFRASFDG YMRTDRRNEG
VTRVSTTGIV KLPTHSEVLD QPTIVTSPTF ISPTTASTPA IMNSPLSAFT PTSPTLTVPY
PSGASSMPPP PPPKEYARPY MPSRHSVHMP SGDYISPYIA STSASGSSDY DASLRLPSPF
ESSPDLRLSV GSGDKVRHSM DSSRPVSGTS YSRTSPNPSM TSVSPHPVPK IGLGHPSAAA
ILGTVNVGVG GVGGLGAGGD EDELREEAGR KKEGVLWGLG TWEGLTKGSG SKGKWEKYWV
VLDHSSIYEY RDISGPPGGA HAVIDLKFAS VLFEIVTPSQ GRRLYQATSD QEMKQWLYAI
CNAIESCING TSTVRTIDQA KARGPSGAYD DHALPARSKY NLGFSARNLS LGFVPLIQTG
RKSMPSTPVE ATSGEARIRK TSLKKVLKQS GERFTNAMTG ATSSINLAAH MADQPSEKAK
RNSFGGLEVP RPTFGRAGSR QSLPASAPDR QPLQQQFNQL LPPISTPPGA KSSWADNDIE
NRVLEMAGLG LGASPPSRSG GGHGVLSLAE SPSSAKRRVK SEAIRKPHAN KHKLAQHQGG
EGLTRSKSDD GSTMLAEDLA DDKKELKKIA SEEGNARCAD CHGGMKASRW ATISLHNTPI
VLFLCIRCIG IHRSLGTHIS KARSVDMDNW TPEQIALARE WGNIRGNAVW EATRGDEEPR
PLGPEGMKEF VKQKYVEGRW LRPDDRLRFG FGPKV
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