Gene CNJ01190 details

Gene Information

• Locus tag: CNJ01190
• ID: 3254062
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006679
• Strand: +
• Start bp: 334310
• End bp: 336581
• Gene Length: 2272 bp
• Protein Length: 464 aa
• GC content: 49%
• IMG OID: 638253276
• Product: acyl-CoA dehydrogenase, putative
• Protein accession: XP_567497
• Protein GI: 58260174
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1960] Acyl-CoA dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0721671
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTATGTGTT AACAATCTGA CTTCTAATTA ATTATCCATT TTATCTTTTT ATCTGATTTA 
CCCTTTAACA TTACCGGCAA TCTCAAACTG CCACAGCCGA AAGAGGTCCA CCAAAGCAAG 
ACGTTGTAGC ACCAGTGGTC TTCGTTGGAT GCTCCCAGAA GGACTTCGTC GCTGGGATTG 
ACTCAGGCCA TTCACTTTCC TTTCCCCTTT CAGAACTGCA GATCAAGCAA CAAGAGCAGA 
TATCATGTCC GACCACCCTG TACTTCGATA CATCCCTGCT GGAACTTGGG CTTTAGTTGG 
TCACTCTCTT CCTGTTTCGT TTAAAATAGT TCGCGAATTT CGAAAGAGCT GACGGATATA 
AACTGTAGGT GGAACCCCTT GTGTCCGACC GGGCTAAAAC GTTGCTTGTA ACCCTCATTG 
ATTTCCTTGA AGTGAGCCTG TGTCCTTTGA GTTATCACAG TGCATACTGA CCGGCATAAC 
TATCTTAGAA TGATGTGATC CCGTCAGAAG CCCTCTACTA TGCTCAACTT CCAGCCGACC 
CTGCTACCCG CTGGCAAGCC ATCCCCCAAG CGCTGGAGAA TCTTAAGATT AAGGCAAAGA 
CGCTCGGCTT GTGGAACCTT TGGTTGAGTG GAGGAGATTT TCAAGGAATG GCTGGTGGTG 
AAGGTGGAGG ACTCACCAAT CTCGAGGTGC GTCTTCTGTT GACATATCAG CCCAAGCTTC 
TGATCTGTCG CATCTATTGG TGGATTGCTG ACGAATACGG TGCCGATAGT ATGCCATAAT 
GGCAGAAATC ATGGGTCACT CGATAGTTCT TGCCCCTCAA GCTACCAACT GCTCGGCCCC 
TGATACCGGC AACATGGAAG TACTTGCCAG ATTCGGGACG CAAGAGCAAA AGAACAGGTA 
CCTGGTGCCA CTTTTGAACG GAGATATCAG AAGCAGCTTT GCAATGACAG AATACGGAGG 
CAAGTCTTTG ATCCACAGGC GCCATAGCAT CAGTCATGCC ATGCTAACTT CTGAATAGTG 
GCTTCATCCG ATGCTACTAA CCTCCGCAAC ACCCAAGCCA CTTCCATGTC TTCAAGCACC 
CTCTCGTTGT CAGGACATAA ATGGTGGATC TCAGGTGCGG GCGATCCTCG AACATCTGTT 
CATATAGTGT TGGCCGTTAC CGATCCCAAG AACCCGTCAG CATACAAGCG ACATTCACTG 
CTGCTTGTCG AACCGAAGCA GAAGGGTGTA AAGATTGTAC GGCCGATGAT GGTGATGGGA 
TACGATGATG CACCAGAAGG GCACTGCGAG GTCATATACG ATAACGTGGA AGTGGATCTT 
GTCAAGGGCC TCGTGGGTGG CAAGGAAGGG CTAGGAAGGG GGTTTGAGAT GCTACAGGCG 
AGACTCGGGT AGGTCATTTT CCCCCTTGGG AAAGTCTATT TTCCCTTGCT GACAATAAGA 
TAGACCTGGA AGACTTCATC ACTGCATGCG TTCGTTAGGT ATCGCTTCTA GGGCTCTTGA 
TTTGCTGCTC CAGCGAGTTT CCGACCCCGC AAGGAAGACG TTTGGGAAGT TTTTGCGAGA 
ACATGGTGAG ATTTTCCCAG AAGTGTTTTC TCCATTTATC CGGCTAACAT TGAGGGTGCA 
GGAACGGTGT TAGCAGACAT CGCACACTCC CGAGCAGAGA TTGATCAATC ACGATTGCTC 
GTCCTTGCTG CTGCTCGTCA GATTGACGTG GCTGGTGCCA AGGGCGCCTT GCAGGACATT 
GGTATCTCCA AGGTTTGGCC TTGTTTCACT TCATAGATTA CATGGGCTGT GACACTGACT 
GCAGCGATAG TTTACCGTCC CCAAGATGGC CCTACAAGTC GTTGATCGTG CGATGCAAGT 
CCATGGCGCG GAAGGGCTAT CACAAGACCA ACCCCTGGCA TCATGGTACG CTCAGTTGCG 
AACCTTGCGC TTCGCAGATG TGGGTCTCTT CTATCACATA GATTTAAGCG CAACTAGAAA 
CGAGATGGAT GGAGGACGCT GACTTGCCTT GTTCTCAGGG TCCTGATGAG GTACACATTC 
AGCAAATCGG TAAGCGTGAG CTTAAGAGAG TAGAAGAATT GCAGAGTAGG ACGGAGAAAA 
TTAGAAGGAA AAGTGAGAAA CTACTGAAAG AAGGTGGCAA GGAAAGAGCG AAGCTGTAAT 
TTTGCTTTGG CCACCTTAGT CGAGGTATTC AGAAGTTGTC GAAGAAGATT AGCCCCATCT 
TTATCTTGTA ATCATTGTCA CCAAAGAAGA GAAGAAAGCA TGTATCATAT AA 

 

Protein sequence

MSDHPVLRYI PAGTWALVEP LVSDRAKTLL VTLIDFLEND VIPSEALYYA QLPADPATRW 
QAIPQALENL KIKAKTLGLW NLWLSGGDFQ GMAGGEGGGL TNLEYAIMAE IMGHSIVLAP 
QATNCSAPDT GNMEVLARFG TQEQKNRYLV PLLNGDIRSS FAMTEYGVAS SDATNLRNTQ 
ATSMSSSTLS LSGHKWWISG AGDPRTSVHI VLAVTDPKNP SAYKRHSLLL VEPKQKGVKI 
VRPMMVMGYD DAPEGHCEVI YDNVEVDLVK GLVGGKEGLG RGFEMLQARL GPGRLHHCMR 
SLGIASRALD LLLQRVSDPA RKTFGKFLRE HGTVLADIAH SRAEIDQSRL LVLAAARQID 
VAGAKGALQD IGISKFTVPK MALQVVDRAM QVHGAEGLSQ DQPLASWYAQ LRTLRFADGP 
DEVHIQQIGK RELKRVEELQ SRTEKIRRKS EKLLKEGGKE RAKL