| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ01050 |
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| Symbol | |
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| ID | 3254358 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | + |
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| Start bp | 299060 |
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| End bp | 300948 |
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| Gene Length | 1889 bp |
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| Protein Length | 534 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638253262 |
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| Product | protein-ER retention-related protein, putative |
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| Protein accession | XP_567484 |
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| Protein GI | 58260148 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5409] EXS domain-containing protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.112292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAGCGCCAAT GGACATCGAC TCGCCCCCCT CAAACTCCAT CCCAGACATC CTCCAGCCAG
ATCCCCACTC CCACATCCTC CTCCCCTCCT TCTCCGCCTC CTTCCCCTTA CCCTTCCGCG
TCCTCTTCCT CGTCGGCCTC GCAACCCTGC TGTGGGCAGT CAACCTCCAT GTCCTCTCCG
CCATCGGCAT AGACATGAGC TGGGTCCTCG ACCTGAGGGA TGATCCGGGA GGAGGAGATA
TATCCCTAGA GGAAAGTGAT GATGGCGGCG AGCTTGCGGA ACAGGGTATG CATCTGGAAA
TCTCCCCTCG ACTGCAGCAG CTTGGAAACA TCACCACCAC CACCACCTCT CTCAATGAAC
CCGATACGCC TATCCGCCCT ACAAATACAC GGATCGTGAG ACCATCGGCT AACAAGCTGC
ACGGACCGAT GTACAAATTG TTTCTCATGT ACTGCGCCTG GGTCGGGACG GCATGGGTGC
TTTTTAGGTA TTTGAGCGGC GATGAAGAAG AAGCCATGGA GAGGTGGAGA GTGATTCCTG
GTTTGGCAAT GGTGGGTGTT GTGGCTGGTG TGGCGGTACC GTGGAGAGGT GTAGTGGAGA
GGGAACGGGC CGGGTTTAGA AGGTGTGTTG TGTTTGTTTG TTTACAAGAG GGAGTTGGTG
CTAATGTCAA CGGTGTAGAG CGATCAAGAG GATATTACTG CCTCATATCA ATGATCCTGT
CCATTTTTCA GATGTCATCC TCGCCGATAT CCTCACGTCG TTTGCCAAAG TGCTTGGTGA
CTTGTGGATC TCCGCTATCC AAATCTGGAG CGGTGGGATC ACCCAGGGTC GTGTCAGTCA
AAGAGGATGG AGCAACTATA TAACGTTGCT CATGGTAAGG TAAGTTTGCT TTTTTAGGGC
AGTTTAAACA CCATGGCATG AGCTCAAATA AAAGCAGTTT GCCATACATG CTGCGATTCC
GTCAATGTCT TTTGGAATAC TATCAATCCT CATGGCAATC CCCGCGTCCC CTTGCCAACG
CTCTCAAGTA CTTTTCCGCG TTTCCCGTCA TTTTCCTCTC CGCTCTACAA AAATCCGTCG
TGTCAGATAT CGCCAGTCAA AAGGGCATCT CTGTTCAAGA ACTCACCGAG CGACATGATC
GATGGTTTGG AGAGCACCGA TTGTTCAGAC TGTGGCTTCT CGCCGTCTGT GTCAATTCAA
TGTACAGCTT CTGGTGGGAT GTGGAGATGG ACTGGGGATT AGCGCTGTGC GAGGCGGACA
CCTGGTTGGG AGCCAAAAAG GAAGGCGGTG GGAGGCATGA AGGGTGGATA GAGAGGATGA
AAAAGATGTT GCGCAAACGG AGGGATACGG GCCATCATCA ACGGTCTCCT TGTCCTACCC
CATCACCATT TGTCACCTCA CCCTCCATCT CACCTACACG CGGATCCTCC CGCCCAGCTA
AGCCGTTCTT TGCATTCGGC CTGCGCCCAA CTCTTCTCCT CCCCGACCCC GTTATCTACC
ATCTGTTCAC CATCATCGAT CTCATACTTC GATTCACATG GTCGCTCAAG CTCTCTAATC
GTTTACATAC TATCAGTGAG ATTGAAAGTG GAGTGTTCTT GATGGAGACG CTCGAGTTGT
TGAGGAGGTG GATGTGGGTG TTTATCAGAG CAGAGTGGGA GGCGGTTAAG ATGAAAGAAC
ATAGGTGGGG AAGGGGAAAG CTTGTCTGGG AGGAGGAGGA GCAATGAAAA TGGTTTTGGT
TTGTTTGTGG GAGGGTTTGA TTGGCATAAG CACTGGATAA GGATGTAGTG TTGTTGTGTA
GATACATATA GATTTTCTGA TTTCCACAGC ATCTTTTTTA ACACTGATTA TGATATTGCA
TGGGTTTTAA TAGTACAACA TGTGTAATT
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| Protein sequence | MDIDSPPSNS IPDILQPDPH SHILLPSFSA SFPLPFRVLF LVGLATLLWA VNLHVLSAIG
IDMSWVLDLR DDPGGGDISL EESDDGGELA EQGMHLEISP RLQQLGNITT TTTSLNEPDT
PIRPTNTRIV RPSANKLHGP MYKLFLMYCA WVGTAWVLFR YLSGDEEEAM ERWRVIPGLA
MVGVVAGVAV PWRGVVERER AGFRRAIKRI LLPHINDPVH FSDVILADIL TSFAKVLGDL
WISAIQIWSG GITQGRVSQR GWSNYITLLM VSLPYMLRFR QCLLEYYQSS WQSPRPLANA
LKYFSAFPVI FLSALQKSVV SDIASQKGIS VQELTERHDR WFGEHRLFRL WLLAVCVNSM
YSFWWDVEMD WGLALCEADT WLGAKKEGGG RHEGWIERMK KMLRKRRDTG HHQRSPCPTP
SPFVTSPSIS PTRGSSRPAK PFFAFGLRPT LLLPDPVIYH LFTIIDLILR FTWSLKLSNR
LHTISEIESG VFLMETLELL RRWMWVFIRA EWEAVKMKEH RWGRGKLVWE EEEQ
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