| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ00920 |
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| Symbol | |
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| ID | 3254211 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 262955 |
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| End bp | 267319 |
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| Gene Length | 4365 bp |
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| Protein Length | 885 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638253249 |
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| Product | Rab family GTP-binding protein, putative |
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| Protein accession | XP_567472 |
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| Protein GI | 58260124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAAGCCGAAG CGCTAATCTT GTCAGCAACA CTCCTGCGTC GCGACGACAC GACCTTTGCA
GAACTCAGGA TTCTCCAAAG CGACGAGCAA GAAGTGAGAG GTAGAAGAGA AGGGCCAGGG
CATTGGGAAC AAGGAAAAGG CCGAGCACGA GCCGCATATC AATAGCGTGG AGGGGTCCTT
TGTGTTGGAT CGGCATCCGA GGTTGTCTTC TACCGGTCGG GCAAACCGCC CCACTGTCAG
CTGCGACGGC TGAATAGAAG CAAACGAGTA TTTTGTGCGT ACCACCGTCT ACCGACGGGA
TTGAGCAGAC GTACATCATC TGCGCGAGTA AGCCAAGGAA GGCTGAAGTT AGAGAATCAA
AGCCACGAAA CGGACAAGGG ATAGAAGGAG GGCCTCAAAC ACCATCATTC CCACATCAAC
AAACACCTTT TTGTCTTCCA TCGCTAGCCC ATTCGCGCGC GATAAAGAAA GAACCCCACT
CGTCATCTGG CTTCTGTTGA TCCGATAACA GATCACACAC GACATAACTA TCAAATTTGC
GTTCGGTTTC ACCGACAGTC AATTTGCCGC CCGGAAGAAG AGTATATGGC TATTCGCGAT
ATTTCCCTTT GTGACCATCG TGGCAATTGC ACATTAGGCC ATTACTGGTG ATAGAGGGAG
ACAATCCATT CGGTAACGTC TCAACAGTGT CTTCATTACG CCTTTACGAT CGGATTCCTA
GACAGCGTTG TCTGTGCAGG ACAAAGGTGC TACGGGGTTT GATTTAACAA AAAGACGTCA
TTTTCGGTGT GAAAGGGGGC AATCATATAC CCATCTCAAG ACCAGAAGGG TGATTGTGCG
GGCCAGAAGG GACTACTGTA TCTGGAGTAT CGAGTGAAGG TGAGTCGGTA TATCAACCGT
GTCCACTTGC ATCTCTTTCT TTCCTTCCTC TTCATATTCT GCTGCTCGAT AGCGGTAAGA
GCTGGGCTCA ACTCAAGGCG ATTTTGCTGG TCAAAATCCG ACGCTCTTTA CACCTCCTGT
CACATCTACT CATTTGCGCC GCTCGTGATC CCGACAGTGC TGACTCTTCT CCTTTGTGTC
TACAGCTTAA TCCTGGAAGT GAGTCAGCGA CATGGATCAT AGGTCATGGC TACTGGTCGA
TTGCAGGCTG ACTGGCTTTT AGACTTCAAG TCGACATCTC GCCCTGCTTC TAGCTTTACG
CTGCTGATCG GAACGAGCCG CGTGTTTGTA CCTCTGTGAT CTGTGAGCGG GCGCGGACCG
TACTTTCGTA TTGATCCATG CTGACGCCTG TTCCTGTTCC GCGCTCAGAT CGGCAACTAG
ATTTTTATCC AACTTCGGGT CCTCGACTTT TACCATTCAT ATCTCTCGTC CAGCAACAGG
ATCATAAGCT CGGCCATGAG CGTCCTTGCT ACCCCGCTTC CACACCGGCC ATTCTCAGAT
ACGGAGCTCT TCACATCGTC CAGTGGCTCT GTCCCCGCCC ACGCTGAACT CCCTCCTGTG
CCTCCCCATA TCGCTCTGCC CATCCCTTTG CCACCGCAAG GAACATCGTT TTCCACGTTT
CAGCAACGAC ATACATCTTC TTACCCTATG CCTCAGCAAC AGACATTCTC AGCTCTTGGC
CCGGCTCAGC CAGATGTAGT GCCTACGAAT GCTATTATGC CACATGCTGA GACGTCGCCA
TCTGCCCCCC AGGGCTCAGC GGTGGGCTTG GCAGATCTTA CCCCGGATAT ACACCCTCAG
ACTCCGTTAC CGCCAACCCC AGAGCCTTCA CCCCCTCGAA GAAAGGTTTT AGGACCAACG
ATGATGATTA AACTCGCGCC ACCAGCGGAT GACCACTCTT ACCACCGGTA TGATGTACTG
GGGACCGAAG CTGAGCCTAG TAGCGTTCAC TCCGGCGAGT CGTCTGGAAG TACTAGCACA
ACTCCTCGGC GATTGCCCAC ACTGTCCATA GACATTGAAT CTTTCGATTC ATCTCCTTCG
CATCGCACGC CTTCTCCAAA GCTTGGCACG TCAAGTGGAA CACCCTCACA GGCCAGAGTA
AAGTCATCTT CATCTACTGA TCCCAAACCG CCCAGACCGA AATCGATGGG ACCACCACCG
CGCCCTAGAC GAAGTCAAAC AGCTTATCCT CACGGGCCTG TATCTGTCCG TATGGCCGAA
AGCCGGAGTG CTGATTCCCG AGAAAGGAAG CTCAGAGCGA CCAGTGTCCT TAGAGCAAGC
TCTTATAGCC AAGTAAGGTC GGGGTCACCT GGTCCTTCCC GAGCATTTTC AGATGCCGGA
TCTGGATCTG TCACCCCAAG AGCATTTAGT GCAAGTGATT TGGCGCTACC AGATCTTGGA
GGGCCTGACG GTTTGGAGGC GAAAGTTGTA TTGCTTGGGT CACAAGGCGT GGGCAAAACG
TCACTGATTT TGAGATACAC CACTCGCACA TTCTCTGTTA CTCCCGCACC CGCCACAATC
GGCTCTTCTC TCCATACCCG CAAGCTTGTG CACTCTGGTG TAAGGGTCAA ACTTCAAATT
TGGGACACTG CTGGGCAAGA ACGCTTTCGT TCTATGGCCC CCATCTATTA CAGAGGAGCA
CACGTATGTG TGTTGGTTTA CGACATCTCT GACAAACAGA GTTTCGAAGA TGTTCGAAGC
TGGCTTGAGG AGTTGGGAAG AAGTGTACCA AAAGAGACCG TCATCTTTGT GGCTGGAGCA
AAGATTGACT TAAACGATAG GAGGGAGGTG GAGTGAGTAT GGTTGTGATT CTTGGCGAAA
CGAACTGACG AGACATAGGT TCGATTTTGC CAAAGAGATG ATTAGGTCCT GGATCAGCCC
GCCGTCTCCA CCACCACCCG TCCTTACGCC GATGACTTCA CCGCCACAAA GAAGTCTTTT
CCGCTCTTCA ACCTCTACTT CTCGTATTGA TTCCCCCTCA CCAACCCCGA CCATTTCCCG
CGCGCCGTCC ACCCGGATTC ATTCTTATAG CTCTCACATT ACCGAACCTA CTCTTCGCTC
AGCGCCTATC AGTTCTTCTT CCAGGCATTC TGCTGATTCA CCACGCCCAC TGGCGTCTGT
GCCCTTCCCC AGTCCGAAAG ACATCCCAGT TTCTCCAGAA AAAAGCAAAG CGAAGGAGAT
TGCAAATGAA AAACGATCAA GAAGACACAG TGCAAAACCT TTTCCTGTTA AGGTCACTAA
CTCTGCATCT ACCAGTCTTG CTACCTCTCC TTCGCGGCTA GAGTTCCCCA CATTGCAGTC
ACCAACTGGT CCGACTTCGG CGACTTTTAC TGAGCCTGTC GGCCCTTTAT TAGCTTCTCC
GACCTCTTCA CCTGGTCATC GTTCATCCGG GGGTAGATTT TCTATCTCAG GCATATCTGA
GGTGTTGGGT TTGAACCGGA CAGTCAGCAT GAGTGGTGCC ATATCTAGCT TACATCAGCT
CACAGAAGCA CCCTCCCCTC CGCCACTTCA GACTTCGTCA CCTGGGTCGT CGTCTTTCAA
TCCCCCTCAA CTTCCCTCCT CACCACGAAC TAGGGTTGAA AGCAGCCCCC TCTTTCCTTC
ATATGGTTCC GATCGTAACG CTCGTCGGAA ATCTGACGAA TGGTCCAGAG GTGGGTGGAA
AATGGGCGAA GGACCTGGTG TGGCAGAGGC TCTTGGTGAA TTTGGGGCAG GAGTGAAAAG
GAGAGAGTCC GAAGAACTTT TGGGGGGTAC CAATAGGTCT TTGCCGGTCC TTGGAAATCC
ATCTTATAAG GTAAATCAGG TCAGAAGTAG AGCTGGAAGC CTGGGAAGGG ATCCCAGATT
GATAGGGGAA TTGGAAGAAG TGGAGGACGA ATGGGGCGTT CAAGTGGAGA ATGTCAGATT
GGGAGAGTGC AGTGCTCTCA CAGGTGAAGG TAAGTCAGCT CGTCTTGTTT ATCTGGAGCC
GGTACTGATT TGTCAACTCA GGCGTGGAAA AACTATTTAA AGCCATCTCG TCAATCCTCG
TGGAACGGAA AGACAAGATT GAGAGGGAGA GAGTGCTGAG ACACAAGGAC AGTGTTATCC
TCGTTGATCC TTCAACAAAC CCCAGGGGTT TGGACAAGGA GAAGAAGTCT GGGTGTTGCG
TATAAGCATA CCCTGTCCTT TGAGTCAGAT CATTTAAACA CGAACCGAAT TCGACCGATT
TGTACGACGA TTTAACGAAC TTACGACTTG ATGAACATGA CGTCTCCTGA GCCTCTTTTT
GACTTTCTCA TTTTGATCCC ATATGCTAGC TTGACTATGT GTGACTGTAC TTTAGCTCAT
AGCCTTTCAC TTTTCCTCTC ACGGTTCCGT TTAGGGTAGG TCAACAATTA TAAGTATTCA
TCTCCTGTAG TTTCTTTATT TTCCTTGTTC AAGCGATTAT TGTGA
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| Protein sequence | MLTPVPIFIQ LRVLDFYHSY LSSSNRIISS AMSVLATPLP HRPFSDTELF TSSSGSVPAH
AELPPVPPHI ALPIPLPPQG TSFSTFQQRH TSSYPMPQQQ TFSALGPAQP DVVPTNAIMP
HAETSPSAPQ GSAVGLADLT PDIHPQTPLP PTPEPSPPRR KVLGPTMMIK LAPPADDHSY
HRYDVLGTEA EPSSVHSGES SGSTSTTPRR LPTLSIDIES FDSSPSHRTP SPKLGTSSGT
PSQARVKSSS STDPKPPRPK SMGPPPRPRR SQTAYPHGPV SVRMAESRSA DSRERKLRAT
SVLRASSYSQ VRSGSPGPSR AFSDAGSGSV TPRAFSASDL ALPDLGGPDG LEAKVVLLGS
QGVGKTSLIL RYTTRTFSVT PAPATIGSSL HTRKLVHSGV RVKLQIWDTA GQERFRSMAP
IYYRGAHVCV LVYDISDKQS FEDVRSWLEE LGRSVPKETV IFVAGAKIDL NDRREVESWI
SPPSPPPPVL TPMTSPPQRS LFRSSTSTSR IDSPSPTPTI SRAPSTRIHS YSSHITEPTL
RSAPISSSSR HSADSPRPLA SVPFPSPKDI PVSPEKSKAK EIANEKRSRR HSAKPFPVKV
TNSASTSLAT SPSRLEFPTL QSPTGPTSAT FTEPVGPLLA SPTSSPGHRS SGGRFSISGI
SEVLGLNRTV SMSGAISSLH QLTEAPSPPP LQTSSPGSSS FNPPQLPSSP RTRVESSPLF
PSYGSDRNAR RKSDEWSRGG WKMGEGPGVA EALGEFGAGV KRRESEELLG GTNRSLPVLG
NPSYKVNQVR SRAGSLGRDP RLIGELEEVE DEWGVQVENV RLGECSALTG EGVEKLFKAI
SSILVERKDK IERERVLRHK DSVILVDPST NPRGLDKEKK SGCCV
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