| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ00570 |
|---|
| Symbol | |
|---|
| ID | 3254140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | + |
|---|
| Start bp | 158242 |
|---|
| End bp | 160607 |
|---|
| Gene Length | 2366 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638253214 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_567310 |
|---|
| Protein GI | 58259795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAGCCCTTGT GTGCCACTTG CAACAGACTA GGGATTGAAT GTATGGGATA CGGCATCAAA
CGTCCCGACT GGCTCAGGCA GAAGGAGAAC GCTCGTAAAG CTAAGCAAGA AATGTGAGTA
TCACTTGCAT TTGGATTATG GGAGGCGTTG CAGTATTTGA TAGACAACGA CTAATATACG
AAACTACAGC AAAGCGACCG TCATGTCAAA ACGTTTCAAG CGAGCCAAGA CGGCGGAATC
GACGGTTGTC GATGACAAGA ATAGCTCATA CGACCAAAGA GTGGGGTCAC ATGACAGCGA
AAGATCTGGA TCTCTGAGCA CCAAGGAGAC GGTTCTGGAA GACGTTCCGC TTCCTTTTGA
GATGGGTAGA AAAGACAGAC GAAAGCAACC GGTCAATCCA CGCAAGGGAC CAGAGGCGCC
TGAAGACAGT GATGGGCGAG AAGGTCAAGT GCACTCCATG GGTGAAGACA ACTTCTCTCA
GTGGGCGGCT GCAAACCAAG AGCTCTCAGA ATACTATACT GGGGAATCAC ATACCTTCCA
ATCCTCGGCC AGCGTACTTG ATACTCTGGA TCCAGCCGTG TTGATGACCA ATGACTCCAA
CGAAAACATT CTTCAGCCCT TCTCTGATCC TTCAGGACCG TCCTTACCGC TCGTTTTTAC
GAGCACTGCA ATACCTGCCA ACGAGGGTAT GGATGAGCTC TGGTCGACTA TCTTCGGGTC
GGTTGATCCG GCCTTCTGGG GTACAAACTC GCCTCAAACT ACCGCCGTTC CCAAGAGCCC
TGAAAGTCTA TCGTCCTACC TTATGATCCC CACTCCAACC GCTGGCCTTT CGCCTGGTAA
TTCTGACAGG ATGAGATACC TTCATCACTA TCTCAACGTC GTCCTTCCTC TTCAATATCG
CATGCTTAAC ATCTCCATCT CCATGAGCGA CTTTGTAGCA CCTCTAGCTC TCTCATTCTC
GGAAGTTTTC GACAGTGTTT CATCATTAGC GGCGCTTCAC ATGGTCTCTC AACGGACCAA
GAAACGTGTG GATATAACCA CTGCGGATTA CACTGCGAGA CTATCTGTGA TTCACGATGC
ATTAGAACGC GATCCTAGTG GTAGCGCTAC TATAGAGGAA TTCAGCGATG ACGACGCTAA
AATAGCTGTG TCGGCGCACC AAAAGGCCGT TGAACGCCTG CGTTTCCTCT CGCCTCAGGA
TCTCACTGCT GAGGATGTCA TTGTTTCAGC TTTATTCGCC ATCTCCTATC ATCTTTTCTC
TGGCGGCACA TCGAAGCAAT TGAAGGAGAT GATTTTGATC AATCAAAGAT GTTTGTCAGC
TGCCTTGTCG TCTTCACCCG AATTTTCTGA AGGTCATCAG TCACGGTATG TGGCAAACGC
ATAAATTATC CGATTATTAT AAGCTAACCA TCCCTATAGT GTACCTTTTC CGGCAGACAG
TCCGTGGTCT CGATATCGTC CCTTGATCGA ACACATGATC TGGATTGACG TTATTGCATC
CGTTTCTAAT GGAAAGGGGT CTAGATTACT ACCGACCTAT CGCCGGATAC TGAAGCATCT
GCCAACCGAC TCAAATATGG GGATGAACAG ACCTTTCCTG CAGATGGACA AAATTATGGG
TTGTGATAGT ACTACAGTAG GTTCAAGCTC TTAAGTAACA AAGAATTAGA GAGGAGCTAA
CCTTCGCACA GTTACTTGCC ATTGCCGAAA TCGTCGCTTT ATCCGAATGG AAAGAGAAGG
CTCAACATGC TGGATGCTTA TCGTACATAG AGCTGATAAA TCGCTCATCA GCAATCCAGA
AACTATTGGA TGAAAGAGCA TGGAGAGAGT GTCATTTGGA TCAACCTTCG CTTTCCTCCA
GTGAGCGAGA GGATACAAAC GATAGCATGC GTCGGATCAT GACCGATATA TTCTTCGGGT
CAGCGAGAGT GTTGTTAGCC TGCGTCATCA ATGGTCCATT CCCTAGAGGT GAGCTCTATT
TACTATGCAA GGAAGGTCGA CATTGACATT CAGTAATAGT CCCAGAAATT GCTCAAGGAG
TTCAAGATAC CCTTGAGGCT CTTAACCGAC TTGACATTGA ACATCCAGAC GCAGACATTC
ACCGAGCTCT AGTACTCCCA ATTACCATCG CCGGCTGCCA CTGTCACACC CCACAGCAAC
AAGCATTCTT CAAGTCGTGC TTTGAGCGGT TAAGCGTAGA GGCTAGGGCG TTTGGTAACA
CAGGTCCTGC GCTCGAGCTT ATGGAGGAAG TGTGGAAGAG GCGAGCGACT AAGGAATCTG
ATGAAGCGGT TTGTTGGAGG GAGACTATGA CAAGTTTAGG TTGGGAGAAT GGTATCCTGT
TGATCTAACA CGGTCTTTCG ATGTTA
|
|---|
| Protein sequence | MGYGIKRPDW LRQKENARKA KQEIKATVMS KRFKRAKTAE STVVDDKNSS YDQRVGSHDS
ERSGSLSTKE TVLEDVPLPF EMGRKDRRKQ PVNPRKGPEA PEDSDGREGQ VHSMGEDNFS
QWAAANQELS EYYTGESHTF QSSASVLDTL DPAVLMTNDS NENILQPFSD PSGPSLPLVF
TSTAIPANEG MDELWSTIFG SVDPAFWGTN SPQTTAVPKS PESLSSYLMI PTPTAGLSPG
NSDRMRYLHH YLNVVLPLQY RMLNISISMS DFVAPLALSF SEVFDSVSSL AALHMVSQRT
KKRVDITTAD YTARLSVIHD ALERDPSGSA TIEEFSDDDA KIAVSAHQKA VERLRFLSPQ
DLTAEDVIVS ALFAISYHLF SGGTSKQLKE MILINQRCLS AALSSSPEFS EGHQSRVPFP
ADSPWSRYRP LIEHMIWIDV IASVSNGKGS RLLPTYRRIL KHLPTDSNMG MNRPFLQMDK
IMGCDSTTLL AIAEIVALSE WKEKAQHAGC LSYIELINRS SAIQKLLDER AWRECHLDQP
SLSSSEREDT NDSMRRIMTD IFFGSARVLL ACVINGPFPR VPEIAQGVQD TLEALNRLDI
EHPDADIHRA LVLPITIAGC HCHTPQQQAF FKSCFERLSV EARAFGNTGP ALELMEEVWK
RRATKESDEA VCWRETMTSL GWENGILLI
|
|---|
| |