Gene CNJ00480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ00480 
Symbol 
ID3254348 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp125311 
End bp126578 
Gene Length1268 bp 
Protein Length221 aa 
Translation table 
GC content47% 
IMG OID638253205 
Productconserved hypothetical protein 
Protein accessionXP_567301 
Protein GI58259777 
COG category 
COG ID 
TIGRFAM ID[TIGR02228] signal peptidase I, archaeal type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTCCT CCGAGATAGC GCGTATGAGG AAATTGGGCG TTCAGGGGGT AAGTTCTCAC 
GCTCAAGGCT CCAGTGTATG TTATCTTGCT GATAAGTTTA TCCCTTATAC TCTCTCTCTC
CTCGCTCTCG CTTTGTGTGT CTATGTGTGT GTGGTGCTCT CCTCTCCTCT CTTGCCATCG
GCTTGTCTTT GCAATGGATG AACGGGGGGA AAAATAGATG CTTTTCCAAG CACTCAACCT
CTTAACGGTA GTAGCCTCTG GGCTTATGAT GTGGAAAGGT CTCTGTCTGT TTACGAATTC
CGAAAGTCCC ATCGTCGTTG TCCTCTCGTA CGTCTCCTCA TCATTCTCGC GCTTTCATTT
TTAAAGGGTG GGTGGGCTGA TACAGAGGAA AATGTGGTGT ATTATATGAT GTAGGGGATC
GATGGAACCA GCATTTTACA GGGGTGATAT CCTGTTTCTC ATAAACCCTA CGGATGTACC
GTATGAAGTT GGGGATATCA CTGTTTACAA AGTGTATGTC TCTGTTTTCT TCTCCTTTTG
GTCGTTCTCG AGTGGTGAGC TGATAGGACG TAAAATCTGG TGATGTAGCC CTGGAAGTGA
AATACCGATT GTCCATCGAG TGATAGAATC GCACACCACG TTAGTTTTTC CCTTTTTTCC
TTTTACACAA ACCATCTTAC AACCTCCTCC CCCCTTTCTC CCGGCAAAAA AACAGAAACA
CAACCCAACT CCTCCTCACA AAAGGCGATA ACAACCCGGG AGACGATGTC GTGCTCTACA
ACGGTCTTCA ATGGATTGAG CGTCGGCATA TTATCGGTAA AGTTCGAGGG TGAGTGACTT
GGCTCATTCT CTCATATACA TCCACTATCC GCTATCACCT AGCCACTGCT TTTCCATGCT
CTCGTGAACC ACCCGTTGTA CCCCTTCTTT CTGCCTTGGA AATGTGGTGT GATATGATGG
GGACGAGGAC CAGGATGAAG AGGGAAAATA AGCTAACCAA AAGGCCTGAT ACCAGGTTCC
TCCCATATGT CGGCTACGTA ACGATTGCCA TGGTGAGTCC AACTGTCCTC CACCCTCTCT
ATTCCAATCA CTTCACCCTC TACCAGGGCC AGACGTAAAA TAGCTAATCA TGGTTTTCAT
TTTGGCATCG TAACGAAAAT ATAGAACGAT TACCCGCAAC TCAAGTATGC GCTGTTGGGT
ACCATCGGCT TAGTCATGCT CGTCCAGCAG GAGCAATAGC AGAGCTTGAG TCTGATAGAT
GGACATGA
 
Protein sequence
MFSSEIARMR KLGVQGFIPY TLSLLALALC VYMLFQALNL LTVVASGLMM WKGLCLFTNS 
ESPIVVVLSG SMEPAFYRGD ILFLINPTDV PYEVGDITVY KVPGSEIPIV HRVIESHTTN
TTQLLLTKGD NNPGDDVVLY NGLQWIERRH IIGKVRGFLP YVGYVTIAMV SPTVLHPLYS
NHFTLYQERL PATQVCAVGY HRLSHARPAG AIAELESDRW T