| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ00280 |
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| Symbol | |
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| ID | 3254289 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 69868 |
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| End bp | 73482 |
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| Gene Length | 3615 bp |
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| Protein Length | 810 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638253185 |
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| Product | LIM-homeobox protein, putative |
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| Protein accession | XP_567285 |
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| Protein GI | 58259745 |
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| COG category | [K] Transcription |
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| COG ID | [COG5576] Homeodomain-containing transcription factor |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTCCCCCCC TGCTTAACAA GTACCGCCCT TATCTGTATC AAGATCACCG CATATCGGTC
CGGCAACTCC TATTGCAGAA AAAGAGACGT CTTCCCCGTT CTCTCCCACC CTTTGTCTCA
TTTTTGTTTC TCCTACGACT CGTAATAGTT ACCGCATCCC GCCTGGGCGA TGCGTCACCA
TTTCATTTAG ACATCTACCT GTCGGCACAG ACATTGATCA TCAACAGCAT CGTCTGCGTC
TGCATCAATA GCGATAAGTC GCCTCAATCT CGCTCCAATT GCAAGCTATC ATCATTATCT
TCGTGTCACG CGTGCTTATG TTAGAGGCTT AGTGTCCTTT GGTAATCTCG TCTTGACGCG
CCATTCAGTT ACCCGTGGTT TGCAGGCGTG TCATAGTATC AAAGCACCCA TTCTCGGCCT
CGACTCCGAC TGCCCTCTCT GAAGAAAGGA CTTCAGAGTC AAGATCTCCG GCGCTGCTTC
AAATTTGACA CGGATCTCCG CTCTCTGATC TTCACAAAAA ACGTCGATCT GTCCATCAAA
GCATATCAAT CAGTTTTGCG CAATTTTTTT CCCTTCTGGA TTGTAGGTTT CCATAAATCT
TCACTCCAAT GTAAATCTCT TGAATGGCGA GCGACGAGCA CTGACCACCG AAATTGTTGC
AAGTAGAATT CTTGCCTTCA ATGTCAGTCC CAGCTCCGCA ACAAGGACAC CCCAACAGCT
TGGATGGTTA CCGGGGATAT GACCAACAAA GGCAACCTGT TACTGGACCA AGCAACTATG
GTCGAGAGAC TTATATCCCT GTCAGCAATG GCTATGCGGC TTATCCGCCT AATCAAGCCG
GCGACGGCTC GCAGCCTGCT CGCATCCCGA TCCAACCACA CATTCCTCCC GAACCCCATA
CCTACCAACG CTCCTACCAG TCCCAACCAG CCGCATACAT GCATCCTTAT GCTGCCGACA
TGCATCAGGG GATGCCATCG TATAGCTATG GCGCAGATGT GGCGCCAACT TACCAGTTTG
GCTCCTTACC TGCCGCTCCG CAATCGCTTT TGCCGCAACA GTCGACACGA CCAATGACGG
CTCATGCGGG GGATACAGTG CCGTTTGGGG AGGATGGCCC AAAGGATGGA AATGATACGC
TTAACACCCT TGAAGTGAGC GGGGATGAAC GTTTTCATAT GAGAAATGGC TAACGACGGT
CATATTAGGG TTTGCAAGTG AAGCATCGTC GAAGGACTAC ACCTGAGCAG CTCAAAGTCC
TCGAATTTTG GTATGATATC AATCCCAAGC CGGATAATCA GTTGAGAGAA CAGTTGGCGG
CGCAATTAGG AATGACAAAG AGGAATGTCC AAGTTTGGTT CCAAAATCGG TAAGTTCTCT
CTCATTTATC GTAATGGAAT GATCACGATG CTAATCCGCC TTTTAGTCGT GCAAAGATGA
AAGGTTTAGC CAAGAAGGAA GCTGAGGGAC AGGAGAGTAA GAAGTCCCCA GAAAACCAAG
AAGGCACATC ATCCGCCATT GGCCCATCAC CCCCACTAAC AGACTCTGCC GTTTCGTCAT
CGCATTTCAA CCTTCTCCCC CCTCCAGCAT CTGTCAACAT GGGTCGACGT GCATCTCTTG
CCAACGGTGA AGCCGCCAAG ATTGAAATAT TCGTCGCTAA GCGCGCTGCC GCCCAAAAAC
GAGAGGAAGT GCTTTATAAT GTCGGCGACG CCGGGGCAAA TTCTCCTGCT CTCGGCCAAG
CTCACGCTGC CAGGCGAGGC AGTGTACCTT ACCCCACCCC TCTGGCATCC GTCCCGCCAG
CTTCGACTTC TCCTTTATCC CCCAAGTTTT CCCCAGCAAT CAGGGGTCCG TCGACATTAC
ACATGGCGGC AGTGCGTAAC AATACTCGTC GTTCGAGTAT ACCAGGTGTC TCCCAACTCA
TCACTAGTGG ACCATTCACC CCTCCTCGCG TGGTTTCGAA CCAACACCAG ACCGCTGCTC
AGAGTAAAGG TACACGCGAA CTCAGCCCGA TTCAGGATCA TGAAGTCTAC GACACTTATG
ACGCTGAATT CCAACCGTGG TCGAGCGATT TCCCTCCTAA CATGCACCTT CCACCTGCAG
AGGGCTTTCA TGACGGACGT CCTTTCTCCC ACGACTCTCC CTTACCGAAT CCTGCATTCT
CTTTCGGTTC CGCCCCTCAG GGCCTTGATA TGCACGGGAT TGCCTCGATG GGTCAATTGG
ATGAGAGGCA ACAGCAGATG TTTATGATGA TGCAACAACG AGGTCGACTC GGTTCAATAG
CATCAATAGG GACCATGGGG ACCGAGACTG GGACGGAAGG AGGGGAATCG TCCAAAGGGG
AGTGGTTGGT TGATGGGCCA GAAGGGTTTG ATCCTGATAC TCGGAGGGCT TCTGCGTAAG
TCTCTATCGC TTGTTATATC GTCCTATCCG TCATTTGCTA ATGCCATTCA ACTTGGTAAT
TTAGACCCGC AGATCTTTTA CATCAGATTG GTCTTATGGG ATTTGCGGCA CTACCTAATG
GCGCGCCCGC GCCCATCCGA CCGTCTCCGC TGAATGCCCA CTTCGTTCCT GACTCTTTCC
AATCTACACC CCCTTACTAC CCTCCTTCCA CATCATCCTC TTCCACTTAC TCTTTCCCCT
TGCACCCTTC CTCCGATTCT CTTTCTATTG AGTCTCCTAC CACGGCACAT TTTGAAGCGC
CCAAGCCTGG GTCAAGAGGT GAACAAGCCC ACCAACCGCA AACGCAGTCG CAGTTACAAC
AAAATCACCG TAACCTAGAG CCAGGGAATC GAATGCCAAG CTACACTAGT ACAACGGCTT
CTCACTGGCC TAATAGCGAT GTTTCACCGT ATAGCAACCA CTCCATATCC TATACAGGGT
ATCAAGACGG ATGGAACCCA AGCCCTCAAC AACAAGCATT CCAACAGCAA CATTTAACTC
CTTCAGGAGA ACACACTCCC AACATGGGCG TGGGCGTTGG TGGCGGTGCG GACGCGGGTG
CGGATGCGGG TATGAGCATC GGTCTCGGCC ACCCCAGCAA CCCTCATCTC GGACATCATC
GAGATCCCAG TCCTGCTCAA CAGCTGCAAG TCGCCGCGTC GGTGGACGAA AAGACTCCTA
CCGCCGACCC GCCTTTACCC CAACCGCTTG GTCATCCTGG CTCGAACTCA AACAGCCTCG
ATTCTCGCAA TGGCCAAGAA GGAGGAGTTA CGGGTGGAAA TGAGGAGGGA AAAGACCAAT
TTTTGTATTT CAGTGAGTCT GGAGGGCATG ATGCGGTGAA TGTGCTGGTA TAAAGGGGTT
TTAGATCTTG ATTGAAGCCG GCAGGGAAGC GCATATGCGT GGAAAGTCAT ACATATGGTT
GTGCGAAGGA GATATGACTG CTTCCATCTT CATGTGGTCA TGTTGTCCCT GCTATTATCT
TTGTTTCATT TCTTGATGCT TGGGTTTTTT ACAAGTCAGC CGATAGACGT TTGAATAATC
ATATATAAAG ATCTCATATG ACACACATTT ATATACATGT CCTATACCTG TTCTGAATCT
TTTGGGGTTT CATCTAGGAC TTGTATCTGT ATTATTACTT CTTGTGTTGC ATGCATTGCA
CGGTCTCCGT CTTCG
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| Protein sequence | MSVPAPQQGH PNSLDGYRGY DQQRQPVTGP SNYGRETYIP VSNGYAAYPP NQAGDGSQPA
RIPIQPHIPP EPHTYQRSYQ SQPAAYMHPY AADMHQGMPS YSYGADVAPT YQFGSLPAAP
QSLLPQQSTR PMTAHAGDTV PFGEDGPKDG NDTLNTLEGL QVKHRRRTTP EQLKVLEFWY
DINPKPDNQL REQLAAQLGM TKRNVQVWFQ NRRAKMKGLA KKEAEGQESK KSPENQEGTS
SAIGPSPPLT DSAVSSSHFN LLPPPASVNM GRRASLANGE AAKIEIFVAK RAAAQKREEV
LYNVGDAGAN SPALGQAHAA RRGSVPYPTP LASVPPASTS PLSPKFSPAI RGPSTLHMAA
VRNNTRRSSI PGVSQLITSG PFTPPRVVSN QHQTAAQSKG TRELSPIQDH EVYDTYDAEF
QPWSSDFPPN MHLPPAEGFH DGRPFSHDSP LPNPAFSFGS APQGLDMHGI ASMGQLDERQ
QQMFMMMQQR GRLGSIASIG TMGTETGTEG GESSKGEWLV DGPEGFDPDT RRASAPADLL
HQIGLMGFAA LPNGAPAPIR PSPLNAHFVP DSFQSTPPYY PPSTSSSSTY SFPLHPSSDS
LSIESPTTAH FEAPKPGSRG EQAHQPQTQS QLQQNHRNLE PGNRMPSYTS TTASHWPNSD
VSPYSNHSIS YTGYQDGWNP SPQQQAFQQQ HLTPSGEHTP NMGVGVGGGA DAGADAGMSI
GLGHPSNPHL GHHRDPSPAQ QLQVAASVDE KTPTADPPLP QPLGHPGSNS NSLDSRNGQE
GGVTGGNEEG KDQFLYFSES GGHDAVNVLV
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