| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ00220 |
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| Symbol | |
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| ID | 3254163 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 52682 |
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| End bp | 55355 |
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| Gene Length | 2674 bp |
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| Protein Length | 710 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638253179 |
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| Product | RNA helicase, putative |
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| Protein accession | XP_567279 |
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| Protein GI | 58259733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.063496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCCCA GACAGCTCTC AAGAGCACCT CGTGCTCTAG GATACGTCCT TCCCCGTTTC
TCCCCTCCTT CCTCTGTTCT TCGAACCGTC ACTCCTGCTT TCGCCAGGTC CACCCAGCTC
TCCTTGAGAC GTAAGTCTTC TAGTGAAGGC CGATGTAGTT CTAAGGCTGA TGTAGTTCTA
ACGGTGACTT TAGGAATTCT TGAGAAAAGG GGCTACGCTG TTTCTGCCGT TGCCGAAAAA
GACGACGACT TCTTTTCCGG CGCCGAACTC GCTCCATCCT CCAATACCGT GGTTATCCCT
CCCCAACTTG ACGACCCTGG CCATCCCGCC TCAGAACCTC TAGTCGACAC CGTCCCATTC
GAATCTCTCA AAGGTCGAAT TAACCATGAT ACACTCAAAG CGCTCACCGT CAAACCTTTC
AAATTTACCG CGATGAGTGA AGTGCAAAAG CGTGTGTTGG GACTTTTGCC ACATTTGAGT
GGGGGAAAGT TGAGGAGCAA GGCGAGGGAA GAAGCCGAAC AGGAGGGTGA GGTCGAGATG
AAAGAGGAAA GGGAAGATTT GTTAGTAAAG GCCAAGACTG GTACCGGAAA GACTATGGTG
CGTATTTGCG TATTCTGATC TAGGGTATTG AGCTAATATT GTTCAGGCAT TCTTGGTCCC
TGCGATTGAC GCACGCATTA ACACTCTTGA ACGTCTCTCT AAAGCACCCA ATCCCGACGG
TACCATTCCT GATAAGCATG CCCAGGGCCG CAACCACCGC GCCATCTCCC GTTCCCACCT
GGGCGCTTTG ATCATCTCTC CTACTCGAGA ACTCGCTACC CAGATCGCAG TTGAAGCGGA
GAAACTCTGT ACTTGGCATA AGGACTTGAC CGTTCACTCA TTCGTCGGTG GTGAAAGCCG
ACTCAGGCAA TTGAAAGAGT TTTCAAGACG GTCCAAGGAT GTAGTGGTGG CTACCCCCGG
CCGATTGAGA GATTTGATCT CAGAACCCCT AGTGAAGGAT GCGTTGGCCA AGACGGATAT
GCTTGTGCTT GATGAAGCTG ATACGCTTCT CGATATGGGT TTCTCCGAAG ACCTCAAGTT
CATCATTGAC CATCTGCCAA AAGAGCGCCA GACATTGTTT TTCTCTGCGA CTGTTTCCAA
AGAAATTGCT GCGATCGCTC GACACTCTTT GCGAAAGGGC CACAAGGTCA TCGACTGTGT
CCCCAAGAAC GAATCAAATG TCCATCTCCA CATCCCCCAG TACGCCACTG TCGTTCCTTC
TTCTGCTGAC GCGATGCCCC ACATTATGCG ACTCATTGCC CAGGACCAAA TGGCGAACCC
CAAGAGCAAG ATCGTTTTAT TCCTCAACAC TACCAAACAA ACCATGCTCA CCGCTACCCT
CGTCCGCGAG TTGGTCGATA CTTTGCCTGC ACAAACAGCC GTCTACGAGA TTCACTCCAA
ACTTGATCAA AACAAACGTA CCCGCTCTTC CGACAAGTTT AGAAGGGAAC ACCGCCCAGC
GGTGCTCGTT ACTTCTGATG TTTCTGCTAG AGGTGTGGAT TACCCAGGTG TGACGAGGGT
TATCCAACTT GGTGTTCCCT CGACTACGGA GCAGTATATC CACCGTGTTG GTCGTACCGG
GCGAGCCGGG AAGGAAGGTC GAGGTGATCT CGTTCTCTTC CCCTTTGAAG CTGGCTTCCT
CGACCATCTC AAGGGCATCC CTATCCAGCG TATCTCCACT TCTGATCTTA CCTCGGACGT
CATCGCCAAG GCGCCCTCAT CATACGCCTC TGTTATTGAC TCTCTTCCTT CCGCCGTCGA
GAGCCTTCTC CCTACTCTTG ACCCCAAGGC TGTCGAGGAA GTCTTCATGT CCATGCTCGG
CTACTACCAC TCCAAGCAGC AGATGTTGGA CGCTTCAGCG CAGGATATCT TGAAGGGTTT
GAAAGCCTGG TCAGTCGAAG GCGGTGGTTT GATCGAACCG CCTTACGTGT CAGAAGAGTT
TTTGAAGAAG GTAGGGTTCA GTGAGAAGAG GAGGAACACC AGGAATGGAG GTGGTGGATC
CAGGGGTGGG TTTGGAAGGA GCAGTGGTGG GTTTGGAAGG GGCAGTGGTG GGTTTGGAAA
GAGGGATGGC GGTAGGAGGG AGGACAGTGG AGGTTTTGGA GGTAGAGGGC AAGGTGGTGG
TGGAAGCGGA TTTGGCGCTA GGAGGGATGG TGGTGGCGGC TTTGCGGGGA AGAGTAGGAG
CGGGGGCTTC AAGCGAGACT ATTAAGGCCT TCTCCTCTCC TATTTTCAGT ACGACGTGAT
CCTTACCGTC CTGTTTATTT TCTCCGTCTT CTACTCCTTT TCTCTCCTCC AAAAAGACCT
ACACATCTAT ATCATCTCGA CTAACCCGTC GCTCTCGCCC TTCCTACCAA TCATCAAAGA
TAAAAAAAAA TTCCCGATCT CTTCAAAATT AAACGATATA GAACCGAATT AGAACCGGGA
CGAACATTCG TCTCTTGATT TTTGTCTTCA TCATCAGCAT AACAGATATT GCAGCTAGTC
ATATTTAGGT CACTTCTCTT TTTCTGGGAT TATGTTGGAT GTCCTCATAC AGGATGAATT
CTCCAAGAGA AGTGGATGGG GGGAAGGGGA ATATAAAGTT GAACCTTTGT TGTACCAATA
TCCTTCACAC CATTCATGCA CTATTTAGTC TTTG
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| Protein sequence | MLPRQLSRAP RALGYVLPRF SPPSSVLRTV TPAFARSTQL SLRRILEKRG YAVSAVAEKD
DDFFSGAELA PSSNTVVIPP QLDDPGHPAS EPLVDTVPFE SLKGRINHDT LKALTVKPFK
FTAMSEVQKR VLGLLPHLSG GKLRSKAREE AEQEGEVEMK EEREDLLVKA KTGTGKTMAF
LVPAIDARIN TLERLSKAPN PDGTIPDKHA QGRNHRAISR SHLGALIISP TRELATQIAV
EAEKLCTWHK DLTVHSFVGG ESRLRQLKEF SRRSKDVVVA TPGRLRDLIS EPLVKDALAK
TDMLVLDEAD TLLDMGFSED LKFIIDHLPK ERQTLFFSAT VSKEIAAIAR HSLRKGHKVI
DCVPKNESNV HLHIPQYATV VPSSADAMPH IMRLIAQDQM ANPKSKIVLF LNTTKQTMLT
ATLVRELVDT LPAQTAVYEI HSKLDQNKRT RSSDKFRREH RPAVLVTSDV SARGVDYPGV
TRVIQLGVPS TTEQYIHRVG RTGRAGKEGR GDLVLFPFEA GFLDHLKGIP IQRISTSDLT
SDVIAKAPSS YASVIDSLPS AVESLLPTLD PKAVEEVFMS MLGYYHSKQQ MLDASAQDIL
KGLKAWSVEG GGLIEPPYVS EEFLKKVGFS EKRRNTRNGG GGSRGGFGRS SGGFGRGSGG
FGKRDGGRRE DSGGFGGRGQ GGGGSGFGAR RDGGGGFAGK SRSGGFKRDY
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