| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ00170 |
|---|
| Symbol | |
|---|
| ID | 3254294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | + |
|---|
| Start bp | 41522 |
|---|
| End bp | 43131 |
|---|
| Gene Length | 1610 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638253174 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_567274 |
|---|
| Protein GI | 58259723 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0885596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TATTCTTCAC TTTCCATCCA CACAATCGTT CATACCCACC ACCTGCACGT CCTCAATCAT
TAACCTGTCA CGACGACAAT CAAAAGCGGT GCCCACACAC ATTACCCCTC CTTCGGCTTT
TGATCGAGTC TCGAATCTTT TGTCTTTGAA CCAGCAATAA CCACTTTGTC ACTCCAGGCG
AGGAAATACT TCAAGACCTC CCGACCCAAC CTTTAATAAA CTGCAAGCTG CAAGCAGGAT
CTTCAAGTGA TTGACGAATT TCGCGAAAAC CACGACATCA CGAAAAGAGA CGGGTGCTCT
TTGATTGTCT TTTTGTCCTG TATCTTGAAA CTTGCAAAAA TCGATTTTCA AAACCCCTAG
GCAAACTATC ATCCAGATAT CTTTCACGTG CATATATAAT CTTTGGCGCT ATTCGACCTC
TTTGTCATTG ACATCCAATC TCTTACCTGT CTGTCGACTG GTTCGACTAA ATCCTTTCCA
CCTATCCACT CTACCATGAC CTCTTTCAAA TTCCTCAGTC TTTTGACCAC ACGCGCACTC
GACTCGCTCC CTTTGCCGTT ACTAGTCATC ATCTTTGTCG CTTGCTTGGT TCTACTGCAC
TGCCCGTGAG TCTAAAACTC CCTATATGTT CTTTTTTTAT TTTCACCCCG AATTAAACCA
ATTAAAACTG CAAAGACTCT TGACGCTAAC GCCTTCATCT ACAGCGCATC CCCAACCCCA
TCTCTCTTAC CACTCTACAC TCCTCCACCA TCTCTATCCT CATCCCCATC CATATTCGAG
AAGGGTAACC GCGTCTCTTC CTTTTTATTC TCCTTCCCTC CCTCACACTC CAGCCCTACC
AACCGCCCAC GGGGGACCGA TCCGTTTTCC TTTCCCGGAT CCCTCCCTGC AGGCTCACCC
TCTTTCCCCC ATACTTCCCT TCCCGCTTCC TCTTCCTCTT CCCAACTGTA TTCCCATTCT
CGACTTCCTC TCGTCTTTTC TTTTCCTCTC GGCGAGACCG CCTGGATATG TACCGAGCAA
CAACAACATC ACGACGGCAG CCCACAGGAG ACGACAAAAC CCGCCGCAAA AGAAAAACAC
GCAAGGCGGG GCAGCAACAA CAACGGGAGT CACGGGAAAA GAAAAATAGG ATCTAAGAGT
TTTGGGTTGA AGGGATGGAA ACTCGAGTTG GGCGTGGTTA GCGAGGAGGC CGAGGCTGAA
CCCGACGTCG TCGACGTCGA GGCCAATGCG CGTGGCCCGG TCGAAACCAA AAGAGTACTA
GAAGTTTGAG AAGGGGTGAA TAGAAGATTT AGACGTTCTC TTTAAGTGTT CCAGCACGGA
CTTTTTTTCG AATTCTTTCT TTTACTTTTT TTTTCTACCT TCCTCACTAA TACTTGTTGA
CAGCCGATTT TTGCCTACCT ACATTTCCAT CTACTGTATA CTACATGCCT ATCTCGCAGC
GCGCTCGTAT CGCCGCACAA ACCAACAAAT CGTTTTATTT TTATTCTTTA TTCTTCACTC
TCAAACAAAT ATTCTTCCCA CGTTCCTTCC TGTATCCTCA TCTAGACTTT TGTGGTCAAA
AACTGTATCG AGATATTTTA ATAGAACACG ACGGGCGGGG CGGGTGTAAA
|
|---|
| Protein sequence | MTSFKFLSLL TTRALDSLPL PLLVIIFVAC LVLLHCPASP TPSLLPLYTP PPSLSSSPSI
FEKGNRVSSF LFSFPPSHSS PTNRPRGTDP FSFPGSLPAG SPSFPHTSLP ASSSSSQLYS
HSRLPLVFSF PLGETAWICT EQQQHHDGSP QETTKPAAKE KHARRGSNNN GSHGKRKIGS
KSFGLKGWKL ELGVVSEEAE AEPDVVDVEA NARGPVETKR VLEV
|
|---|
| |