Gene CNJ00100 details

Gene Information

• Locus tag: CNJ00100
• ID: 3254271
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006679
• Strand: +
• Start bp: 20980
• End bp: 25202
• Gene Length: 4223 bp
• Protein Length: 896 aa
• GC content: 50%
• IMG OID: 638253167
• Product: hypothetical protein
• Protein accession: XP_567268
• Protein GI: 58259711

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00491438
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCGAATCCA CGCCCTGGAC ACCTCCCTAC CCTCGCCCTT ACAACATATT CCTCGCCAGT 
CACAAAAACT ACCTACTGGT CCGGCAAACC GCTAACAGCA CAAGAATTGA TTGCTCTTTA 
TCGAACAACT TATCGGTGGC GACGTTTTCG ATAAGGGCTT GTGCATTTCA AGGAATCAGT 
GTGAGTATTT TGAGTGATAT GGTATTGTGT TCGTCAAGGT GGAGAAGGGG CGAGTGTCTT 
ACTTAGTTCC GTGGACCTCG AGGCCGTGAC GTGGCTAGGG TGATTAAGAC GAGTGGTCGA 
CAACGTGTTG CTGACTTTTT GGACTTAAAC ACAGAAAAAG TCCACACGGC TCTCAAAAAT 
CCCCCGACGA CGGGGAACTA ACTTCAGTTC TATCTATTTT TATCGATTGA TACTCGGACA 
AAGAGGTTTT TTTGATTGAG CGAGAAAGTT GTAAGTGGCT TTCCATTCTG TGGAATGAAA 
GTGCGAAGAT GGCTTGTGAG GATTTGCTGG CAGCGGTAGA CTGAGGAAAT AAGAATCATA 
CCTTTTGTTC AACTCTCATG GCCATTGTGG GGCTACATCT CTGCTTTGCG GGCGAAAAAT 
CTGTCAGGGA GGAGTTTGAA CCCCTCCTTT CGCACTTTTT TTCCTTTAAC CCTTTGCTCA 
TGGCTTCATG ATTTAGGGAT TAGGGATGAT TTCGTTGCTC GTTTGAAGTT CAAAATCCCA 
CAGTTTTCCT CGAACGTGTT GTTTATGGCC CGTTCTATCC TCAACTCGAG AAACCCGATC 
GCTGACGCCA TACCTGCCAT TCAGTCTTCA CCTCTTCCTC TAGCCAGTTC TCCTCTCGAC 
ATCATGTCGC CGTCTCGACA GCAAAGTTCT GTGTTCAACG CCCTTGGGTC CTATGCCGAT 
AGGATCAAGG ATGCCAATGG GAACTTCATC AAATCTTCAC CTTCCAGCTC GTCTTCTGCG 
ACTCCTGAAT CCACCTCTCT ATCGTCTTCC ACTTCCGGTA AAAATGCGTT TTCTACGGCT 
ACTTCCAAAT CTGGTCAGCA GAAGCAAAGT TCCTCGCCCC AACAAGAACC GATTACGGCT 
GAGGACGATG GGCCATGGGA GACAGTTCAA TCTACTCGTG CTCGCCAACG TTCAGACCGT 
TCTGAGGAAA AGGAAAAGGA AAAGCGAGGG AGCAGTTCCA AAAACTGGAG AGACCGTACA 
CATCGTGATG AGAAGAATCA AGATGATGGT GAAAAGAGAA GCGGAAGAGA AAAGTCCAAA 
AAGGAAAAAG GGGACAAGGG CAGTAGTGCA CCCCCTGTAG GGTCTGCTAC TTCTGACGAG 
AAGACTGCAA AAAGTTTATC GAGCTCGACA AAGAATGCTT GGGGTGCCAC TTCTTCGTCT 
CAAGGTGCAA GCCCAATAGC CTCCAACCCC GTTCCCAAGC AAAAAGCGCA AAATGATAGT 
ACATCCCGAT CGTCTTCTGC CGCTGCTCCC ATCGGTCCAA CCACTTCGAG TATAAATGAA 
ATAATCAAAC AGTCTGAAGG TTCCGACGAG GATAATTGGA GAGCTAGGCC TGCAAAGGTG 
GAGAAGAATG GAAAAACGGA AGAGTCTGCT AGCATTACTC AAGCGCAGCC TCAGCCTCAG 
CGACAACTTG CCCCTCCTCC TTCAATAAAC ATTTGGGATC TCCGAAAAAA GATGTCTGTC 
CCTGCTTTAT TCTCTCCAAC CAGTGCCAGC TCCACAGCTA CGGTCATCCC ACCAAAGGGC 
GACAAAGAGA GAAGTTTAAC AAATGGCATG CTCAAGGAGG AAGGTTCCGC TACAGGGAAA 
AGCCTGTCAA AGAAAAAGTC TGCGGCGGCT GCGGCGGCTG TGGGTACTCC GTCGGTACCT 
CCATCGATCC ATGATGCCAC TTTATGGCCA GACATTACAC AAGCCGCAGA GGTTGCCAAG 
GCTGGGGAGG ACAAAAAAGC TAAGGAGAGA TTGAACAGTG AGAGTGCCAG TGTTACGGAG 
GAGAGCACCA TTGGGACCGG TAGTAAGTTT TCTATTCGCC TTGTGGTGCC CATGGTCAAA 
GTACTAAAGT TTCTATCAGA AAAACCCAAG TGGACGCCTA TACCTGCACA CAAACTTTTG 
GCCGCTGCTG ACCGTGCAGC TGAGCAATCC CGTAAACAGA ATCGAATGGA GGCGAAAAAA 
CGAGCATCAG CTCGTGAAGG TGGAGAATCC GGGCCTACAG GGTCAGGTGC GCCGGGGAAA 
GGTAATAAAA CTAGGAAGGG TATGCAGGCT GCCGAGGGAA AGAAGGCTAA GAAGGAAGGA 
GCGCAGCAGA AGGAGGGACA TGCGTCAAGT AAGGCTGGTG ATGCAATTGG TGCGGGTACA 
GGGAAGGCAA ATGGGGATGT GAAGGAAACC AAAGAAGCAG ACGTTCGCTC AACATCTCAA 
CAGGAATCAT CATCCCATCG TTCCGGACCC TCCATTTCTG CCTCCGCCAA CGCGGAAAAT 
GATTCTAGCT TACACGCACG GACCAAATCA ACACCAAATG CCACCACCAC CCCTCTCCCG 
CCCCATGCAT TCAACCTTGC TTCCAGTTCG CATCTTTCCA GATCCATAAG AGGTAGAGGA 
GAAGGTCGAG GATCGTTTGG TGGGGGGCGA GCAAGAGGTG GCTTCAGGAG TAGTGGCGCA 
TTGGGGCCCA AGGGACAGCT TGGGCATGGA CATGGGCATG TGCATGGACA TGGACAAGGA 
CAAGGCCTTG GATACGGTTA CGGATCACCA CCCTTGGGGG TGGCCGGTCT GCCTGTTGAG 
GGTATCGTCT ATGCTTCCAT AAATCCTGGT GTCGGTGCCG GCTCTACTCC CAATTTGTAT 
CAACGAGGTT TCGGTATGGG TTTCCAGCCC TTCTACCCTG CTGCCACCGC TGCGGCTTCG 
GCTGGTGGGG GGGGGCCGAC GGGCACAGCG GCTGGGGATG CGGCAGGAGT GTACGACCCG 
GCGGCGGCTG TTTATGGAAA TATGGGCATG TACAAGAGCG CGTCTATGCC TCCTCCGCCT 
ATGCCTCAGA CAGTTGTACC TAATCTTGAT CCTTTGAGAT TCTACGTCCT CGGTCAGGTA 
AGTTTCTCTT CCTTTGACTT TTTCTCGAGA GAAGAATGAG GCGGATCACT GATGGTGTTG 
TGATTAGGTG GAGTACTACT TTAGCATGCA GAACCTCGCC ATGGACTTCT TCCTTCGTCA 
ACAAGTGAGT ACTCTTCTCC GCGTACAAAA ATGGGAAGTT GCGAAGAAGC AATCTCTGAC 
ATTATTGTCT CCTAGATGGA CTCTGAGGGC TGGATCGACA TTGCCATGAT CGCCTCATTC 
AACCGTATAA AATCGCTTAC CCCCGAAACC TCCGTTGTCC GCGAATGTAT GACCCTCTCC 
AACTACCTCG AAGTCCGAGA AGATAAGGTC CGTCTGAGTG GTGCCGAATC TCATCGATGG 
GTATTACCAG ATGCGCCGCC CAGCAAATTT GGGCCGGACC CAAGGTCGCC CTCTTTAGCG 
GAAGGGGCTG AATCGTCGGA AGAGAGGGAC GGGACTGCTA GTGGGTCTCA ATCCGGCCTT 
GTGACTGTTG GGGAAGAAGG GGCGCAAGGA TTACAAGCGT CGCCTAGAAG GATGTTTGGA 
GCGCAGGATG TGAAGGATGC TTTGATGAAG AGTTCGGCGT TGAGTACTGT TAACGGGGAG 
ATTAAGGAGA AGGAAGAAGT GAAGGCGTTG GCGAACGAGA GCGAGGAGAC AGAGAAGGAT 
GAGCAGCAAT AGGGATGTAA TGGTGAGTAT TGGGAGTTGA TGTGAGGCTT TGGACAGAGG 
AGCTAACGGA CTCATGCCAT GGTAGACTGG ATTTAAGAAG AAATTCAAAT ACAGAAAAAG 
ATACTCCTAT AAACTGTATC AACACCGATT ATCCTCTGTC TGACCATTTA AAAGATCGAG 
TGACTTTCGT ATCCAACAGT CATATTTTCA ACCTTATCAT TGCGCCCCTG CGTTCCGCCA 
ATGCGGGCGC CTCTACACCC CATGCTTTCG CCCTTTGAAC CACAATCATG GTTACTCTGC 
ATTCCCATAT GGAACTTTCC CTTTTTTTAT CCTTCTCTCG CATTATATCG TTTCTTTTCC 
TTTTTACTCA AGTTCCGGTA ATCTTTCTGT GCATAACGAT CCTATCACAT TAACGCGGGT 
GGTACCAGTG TCCATTATCC GTACTACGTC TTTTCTCTAT ATCTGTTTGG TACGAAGTGT 
CAATCCTTTC CGGAGAAACT GTC 

 

Protein sequence

MSPSRQQSSV FNALGSYADR IKDANGNFIK SSPSSSSSAT PESTSLSSST SGKNAFSTAT 
SKSGQQKQSS SPQQEPITAE DDGPWETVQS TRARQRSDRS EEKEKEKRGS SSKNWRDRTH 
RDEKNQDDGE KRSGREKSKK EKGDKGSSAP PVGSATSDEK TAKSLSSSTK NAWGATSSSQ 
GASPIASNPV PKQKAQNDST SRSSSAAAPI GPTTSSINEI IKQSEGSDED NWRARPAKVE 
KNGKTEESAS ITQAQPQPQR QLAPPPSINI WDLRKKMSVP ALFSPTSASS TATVIPPKGD 
KERSLTNGML KEEGSATGKS LSKKKSAAAA AAVGTPSVPP SIHDATLWPD ITQAAEVAKA 
GEDKKAKERL NSESASVTEE STIGTGKKPK WTPIPAHKLL AAADRAAEQS RKQNRMEAKK 
RASAREGGES GPTGSGAPGK GNKTRKGMQA AEGKKAKKEG AQQKEGHASS KAGDAIGAGT 
GKANGDVKET KEADVRSTSQ QESSSHRSGP SISASANAEN DSSLHARTKS TPNATTTPLP 
PHAFNLASSS HLSRSIRGRG EGRGSFGGGR ARGGFRSSGA LGPKGQLGHG HGHVHGHGQG 
QGLGYGYGSP PLGVAGLPVE GIVYASINPG VGAGSTPNLY QRGFGMGFQP FYPAATAAAS 
AGGGGPTGTA AGDAAGVYDP AAAVYGNMGM YKSASMPPPP MPQTVVPNLD PLRFYVLGQV 
EYYFSMQNLA MDFFLRQQMD SEGWIDIAMI ASFNRIKSLT PETSVVRECM TLSNYLEVRE 
DKVRLSGAES HRWVLPDAPP SKFGPDPRSP SLAEGAESSE ERDGTASGSQ SGLVTVGEEG 
AQGLQASPRR MFGAQDVKDA LMKSSALSTV NGEIKEKEEV KALANESEET EKDEQQ