Gene CNJ00050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ00050 
Symbol 
ID3254281 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp9562 
End bp10979 
Gene Length1418 bp 
Protein Length315 aa 
Translation table 
GC content47% 
IMG OID638253162 
Productexpressed protein 
Protein accessionXP_567263 
Protein GI58259701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.16321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTTTTTCCT CCTTTCAGTC ACCTTAATTC ATCACCTATA GTCGTATATG AGCGCTTCAT 
CCCAGCCTAG GCTTAGTGTA AGAGAAGCGG CTCTTGCCGC TGTCCAAGCA CGACTTAACC
CGCCACCTTC ATACGACAGT TCATCCGCTC ACGCCTCAAA CCCCGGCGTC AGTGGCGCCG
CTCCTCAAGC CGCAACGAAT AATGGAAGCA CTGTCGCCGA ACAGACCCCT TTCTCACCCC
CCGGTTCAAG GGCGAGTCCA AGACCTACCT TCACGGATAA AGAGGAGAGG GAACTGAAAC
TGAAGTTTGG GAAATTGTTG GATCGCGGGA TCGTTAGGGA TAATGGCTAT AAAGAAAGTG
CGGAAGCTGT TGAGGTTGGT TTAATCCTTG ACATGAGACG CAGCCGATGT CTATTGTTTA
AGGGAGGTGC TAATCAAGGA CATTTCTAGA CATTATTGAA GATTGCTAAC AATATTCTTT
CGAGCGATGA TCCTAAGTAC CGAACTATCA AGGCCACCAA TGGCATGTTG CAGAAGAAGG
TTTTGTCGGT GAAAGGTGGC CATGACTATA TCATTGCTGT AAGTGATGTC TCTCTCCCCC
CAAAGACTGC AAGCCCCCAG TTCTCCGTTC TTGGCCGTTT GTCACCCTTT CGCAATCCAC
AGTGCCCATC TTATCCAGGG GTTCTTGCTA CCACTACTTA TGCTATCTGT TTGTTCGGAA
ACTGATACTA TTCTTCGAAT AGCTCGGCTT TCGGACGAAG ACAGTCGATT TCGTCAAGAT
ATACGTGTTT GAGAAGACAC TTCGGTCGAC ACACGAGCTC AAGATTGGTG CAGAAATACT
TCAAGGCCAC GTACGTCTAC TTTCACCAGA TCTCTTCCCA AATTCCCTCT AACCTCGTGT
ATTAATATTC TAGTTAACAT CTCTCAAAGA AAGAGTGAAC CTCTCATCGC AATCGCTCCT
CAATTACAAC CAAGAAGAGG CCGCCCGCCG AGCTCAAGCA CTCCGCGAAA TTGAAGCCGA
TCGTGAATCT GTAAAGATCC GGGCAGAGAG GGAACGACAA GCTCGAGAAA CCAAAGAGCA
GGCTAAGAGG GAGAGAAGGG AGAGAGGGGA AGCCGAAGAG GCCGAGGAAG TGGTCGATAG
GGATGATGAG AGGCGGAGGG AGATGGCAAA TGCTGTGGTC AGGAATGATA GAGACTATAG
GCGCAACACT GTTGAGGATG AGTATAGTGA GGATGACGAT TATCCTCCAA CATATGGGGA
AACTTTCTTT GGGGAAGGAA GGAGGTTGGG TGATTAAGAG TATATGCTTA CACGTAATCA
TGTTTGATAA GAGTGATTGA GAATAACGAC CGTTGAAATG TTGTGTAAAT GTTCATTTGT
TGAAATAGAC TTATACTGTT GATGAACAAC GTAGCCAG
 
Protein sequence
MSASSQPRLS VREAALAAVQ ARLNPPPSYD SSSAHASNPG VSGAAPQAAT NNGSTVAEQT 
PFSPPGSRAS PRPTFTDKEE RELKLKFGKL LDRGIVRDNG YKESAEAVET LLKIANNILS
SDDPKYRTIK ATNGMLQKKV LSVKGGHDYI IALGFRTKTV DFVKIYVFEK TLRSTHELKI
GAEILQGHLT SLKERVNLSS QSLLNYNQEE AARRAQALRE IEADRESVKI RAERERQARE
TKEQAKRERR ERGEAEEAEE VVDRDDERRR EMANAVVRND RDYRRNTVED EYSEDDDYPP
TYGETFFGEG RRLGD