Gene CNJ00030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ00030 
Symbol 
ID3254237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp7567 
End bp8418 
Gene Length852 bp 
Protein Length252 aa 
Translation table 
GC content54% 
IMG OID638253160 
Productcysteine-type peptidase, putative 
Protein accessionXP_567261 
Protein GI58259697 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.329282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCCA AGAAGATCCT TATAATCATG TCCGACGCGT CCTCAATCCC TCTCCACAAA 
ACCTCTCAAT GCGGAGAGAC CACTGCAGAC CAGAGCTCTG GCTTCTTCTT GATGGAACTG
GCAAAGCCAC TATCCAAATT CCTCTCGGCA GGCTGCGAAG TGACCTTCGC CTCCCCGCTT
GGCAAGACTC CCACTCCCGA CCCTACCAGC GAGAGCCTCG TGGCCTTCGC CTTGAATTTC
TACGAACGCA AGCGTGAGAA CGACCTCATC GCTAGGATGA TGCGAGAGAA CGGATTTGCG
TCACCGAGGA CCTTCCAAAG CATCTCGGAT GAGGAACTGG ATGGGTTCGC GGCCGTGTTT
ATTCCAGGTG GCCATGCGCC GCTGGCTGAT CTAGGGGCCG ATCCGGAGCT GGGAAGGATC
CTTGCCCATT TCCATCATGA GGGGAAGCCG ACGGCGGTGA TTTGTCATGG GCCTTATGGG
CTGTTGAGCA CCAAGGCGAC GCCGGAAGGG ACGTTCTTGT ACAAGGGGTA CAAGATTACC
TCGTGGTCTG ATGCGGAGGA GAAGATGATG GAAACCCTGT GGGGAGGCGA GGTGCCAAGG
GTGGAGAGTA CTCTCCGTGA GGCTGGTGCT GAGATGGTTG AAGGACTAGG AGAGAAGATT
GGCAGAATTA CGGTGGATAG GGAGCTAATC AGTGGTGGCA ATCCTCTAGC TGCGAATGCG
CTAGCAGAGC AGGTTTTGAA AATGGTCGAG GCTCAGTAAA AACTGGATGG AAAGATTGTC
TTATATCATC AAGGTACTAT GGTTTATCTA CCGCGCCGCA ATTTCATTCT AGCAGATGCA
AACCACTTCA GA
 
Protein sequence
MSPKKILIIM SDASSIPLHK TSQCGETTAD QSSGFFLMEL AKPLSKFLSA GCEVTFASPL 
GKTPTPDPTS ESLVAFALNF YERKRENDLI ARMMRENGFA SPRTFQSISD EELDGFAAVF
IPGGHAPLAD LGADPELGRI LAHFHHEGKP TAVICHGPYG LLSTKATPEG TFLYKGYKIT
SWSDAEEKMM ETLWGGEVPR VESTLREAGA EMVEGLGEKI GRITVDRELI SGGNPLAANA
LAEQVLKMVE AQ