Gene CNA08340 details

Gene Information

• Locus tag: CNA08340
• ID: 3253776
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: -
• Start bp: 2293414
• End bp: 2295405
• Gene Length: 1992 bp
• Protein Length: 550 aa
• GC content: 54%
• IMG OID: 638253155
• Product: hexose transport-related protein, putative
• Protein accession: XP_567073
• Protein GI: 58259321
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease
• TIGRFAM ID: [TIGR00879] MFS transporter, sugar porter (SP) family

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGACG TTTACGATGT TGACGCCATG CGAGAGAAGC TCGCTGGGCC ATCTGGTATT 
ACAGGTCTCA TCAGAAACCG CCGATTATTC GGGATTTCCA TGTTGACTGC CCTTGGTGGT 
CTCTGTTACG GTTACGAGCA GGGTTCTTGT GAGTGAGGAG CTTGTGTGAG ATCGAAAGCT 
GACATACGTG AAGATGGTCA GGTCCAGGTT ATGCCGTCAT TCACTCGGAT CCCAGCATTC 
GAGCGCATCG TAACCGATGC CTCTTTCAAG GGCTGGACCG TTGCGTGAGT TATCCTTAAC 
ATGATCATGT ATTCCGTGCT GATCTTCTAG CGTGCTCGGT CTTGGAGGAT GGGTAGGAGC 
CCTCATCAAC GGTTACTGCT GCGACCGTTT CTCCCGACGT TGGTCGATCT TTGGCGGTGC 
TATTGTGTGC ATCGTTGGAA CTATTCTTAC CGCCGCTGCT GTCAACTCGG CCATGATTTT 
CGTTGGCCGT TTTGCGATCG GTTTAGCTGT AGGATCTCTC AGTACCGCTG TGCCTACTTA 
CAATTCGGAA ATAAGTTCAG CCGAAGTCCG TGGTGCAATG GTCGGCACTT GGCAGCTCTC 
CGTGACCATA GGCATCCTGT TTTCCTACTG GATCGGTTTC GGAACCAACT ACATCTCAAA 
CACCAACACC GTCGCATGGC GACTTCCTGT ACGCAGACAT TTTCTGGTGT GGCGAAGCTG 
ATATCTCGCA GCTCGCCCTC CAAGCAGTCC CGGCAATCGG CCTCGCCATC GGAGCCTTCT 
TTATTCCATA TAGTCCCCGA TGGCTCCTGA AGCAAGGACG CGATGAGGAA GCCCTTCGCA 
CCCTTGCCTA CATCAGGGAC ATGGACGCAG ACAGCGAACT GGTCCGGCTT GAGTATCTGG 
AAATCAAGGC CGATGCGATC TTCGAGCGTG AAACGGCTGC CGAAAAGTTC CCCACTCTGC 
TCAACCGCCC TTTCGCTTTG CAATTCGCCC AGATCGGCTC GTTGTTCACG ACCTGGCCAA 
TGTTCAGGCG TACCGCCATC GCTTGTCTCA TGATGTTCTT CCAGCAGATG AGCGGTATTG 
ACGCCATCAT ATTCTACGCT CCGACAATAT TTGCCTCCTT GTTTGTTCAC ATCTAGTCCA 
GTAGATCTTT GCTAATCACT TGCACAGGGG TATCGGATCC ACCGCCATCT CCCTCCTCGC 
TTCAGGTGTC GTCGGTATCA TGGGTGTCCT CTCCACCTTC CCGGCTCTCG TCATCATGGA 
CCGAGTTGGT AGACGACCCC TGATCATCGT CGGAGGTCTC GGCATGAGCT TCTGCTTGAT 
CATCGTTGCT GCACTTACTG CCACATTCCA GAACTCATGG TCCACCCATG CCGGTGCCGC 
ATGGACCTCG GCTGTCTTCA TCTGGATTTA CTGCTTCAAT TTTGGTTACT CCTGGGGCCC 
CGTCTCCTGG ACTGTGATTG CTGAAGTCAT GCCCATGTCT GCGCGAGCTC CCGGTACCGC 
CCTCGCCGCT TCGGCCAACT GGGTGAGTTT GCTGCCGCCC TACCCCGGGC CAGGTGGGAA 
ATGGAAATAT ACTGAAGAGA ATGCAGATGC TCAACTTCTG TGTATCCCTC ATGGTCCCGC 
CTATGCTCGA GAATATCACA TATGGCACAT GTGAGTTACA AACGGTCCTG TTGTCAGCTG 
TAGATTGACG GCACACAGAC CTTTTCTTCC TCGCATTCAT GCTTCTTGGT GTCGCATACG 
CCATATGGAT CCTTCCCGAG GTGAGTCGAT TTCTTTTTCG TTCATTTCCA TTCTGAGTCG 
TCGTAGACGC GCAACGTCGG TCTCGAAGCC ATGGACAAGG TATTCAAGTC CAACGACGCC 
ACTCGAGACG CCGCGAAGAT GCATGCCATC ATGGAGCGAC TCCGAGAGGA GCACGGCCAG 
TACGACCAGC CTGGAGCCCC GAGAGAGATT CATGAGGACA AGTTGGAGGT GCAGTATCTC 
GAAAGTGTGT AA 

 

Protein sequence

MTDVYDVDAM REKLAGPSGI TGLIRNRRLF GISMLTALGG LCYGYEQGSY GQVQVMPSFT 
RIPAFERIVT DASFKGWTVA VLGLGGWVGA LINGYCCDRF SRRWSIFGGA IVCIVGTILT 
AAAVNSAMIF VGRFAIGLAV GSLSTAVPTY NSEISSAEVR GAMVGTWQLS VTIGILFSYW 
IGFGTNYISN TNTVAWRLPL ALQAVPAIGL AIGAFFIPYS PRWLLKQGRD EEALRTLAYI 
RDMDADSELV RLEYLEIKAD AIFERETAAE KFPTLLNRPF ALQFAQIGSL FTTWPMFRRT 
AIACLMMFFQ QMSGIDAIIF YAPTIFASLG IGSTAISLLA SGVVGIMGVL STFPALVIMD 
RVGRRPLIIV GGLGMSFCLI IVAALTATFQ NSWSTHAGAA WTSAVFIWIY CFNFGYSWGP 
VSWTVIAEVM PMSARAPGTA LAASANWMLN FCVSLMVPPM LENITYGTYL FFLAFMLLGV 
AYAIWILPET RNVGLEAMDK VFKSNDATRD AAKMHAIMER LREEHGQYDQ PGAPREIHED 
KLEVQYLESV