| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA08310 |
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| Symbol | |
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| ID | 3253804 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 2281425 |
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| End bp | 2285010 |
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| Gene Length | 3586 bp |
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| Protein Length | 883 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 638253153 |
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| Product | ligase, putative |
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| Protein accession | XP_567071 |
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| Protein GI | 58259317 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5540] RING-finger-containing ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCGACATACC TTATACATCT TATTCGACAT ATCTTATACA TCTTATTTGA CAGCTGGACC
ATACCGCTCC GCCGCTCTCA CCATGTCCCA GCCGCAAGAT GCACCCACAA CGCCCCGCTC
CCCCCGACAG CCGCTCCCCC CTCCCCAGCA ACTCCCTCCC GACCTCGAAC TCAACCCTCC
CAGGCCACGG CCAAACCTGT CGTCCATGTT GTTCCTCACG GCCTTCTTCT TCTTCATGTC
CGGCAACAAC CACGCACCCA CGACCGGCGG TATGGAAATA GGCCCAGACG GGGAAGTAAG
GCTGAGGATG AGTGAGCTGG AGTATGTGAG AGGGCTGAGA GATGAATGGA GGGGCTGGCT
TAACGGGACA GAGGGAAACT ATACCGAGGT ATGTCCACTG GAAAGCATTT CGAGACATGG
CCACTGACTA TTGTTCTACA CAGCCAGCGA TACCGGATAT CCTCCCCTCG TCCATCGCAC
CTCCAGCGTT TTCACACGAC CCGTTACACC ACAACCACCG GTTCTACACC AACATCACAG
GTTTCTACCG GCACGCCGCC GTCCACCCTC TATCGCTCTC TGAACCGTAC ACTACCTCCC
AACCCCTTGA TTCCCTCGCA GCATTCTGGA AGGGCTCCCA ACTACCGCGG CTGCCGATAA
ATCAAACAGA GGGATGGAAC GAGACGCGGG CAGAGGAGAT GAGGGGCGAA TGGGATTGGG
CGAGGACGGT GAGGTGGGAT ATGAACCTGA AAGAGAGGAA CGTGTCCTCG TCTGTCGATC
CCCCAGACGA CCTCTCACAT CCAGCACAAA AGGATGGCAA CGAGTACCCA GAATGGACGT
GGGTCAAAGG CGCCCTCACA CTGACCTCAC GACCCGCTCC ACTCTCTCCC TCGTCATCCG
CGTCCACCGC CTCGGACAAG ACCATCGTCT ACGACTTCTA CGGCCTCCAC CACATCCCCA
ACGGCACCTA CAACCTCTTT GCCCTCCCTG AGGGTATGCG GCCCGATATC AGACGGCTAC
CTGGTCTGTG GGGCGAAAAC AGGTGGGGAG GGGAGGTGGG GAATGAGACG AGGGGGATCG
TGTTGAGGGA GTTGGAGAAG GAGGTGAAAG TGCAGGAAGG GCTCTTTGTG CTTGGTGATA
TGCGTCAGGA CGGTAAGTTG ATTCCTCCCA GTCTCTTGCT TGCGTTGCCT GACCCAACAT
CTCCAACAGA CGTATCGGAA ACGACCACCT GTCCATTGCT CATCCACCTC GCCCTCCCAC
CCATTCCCTC CGCATCACTC TCAGCCGAAA TCCAAGCATA CCACGCAGAA ATATCCAACC
CGACGGGTCT GCTGGCAAGT ATGAAACGGC CTCCAGGGTA CTCCCAGCTC CCACCAGGGC
TGGGAGGCGT GGTCGTTGCG GATGGATGTG GGTGGGCGCT GGGGGTAGAG GGTGGGGAAG
GGTTGGAGGT AGATGATTTT TGGAGGAGGG AAGTTGATTG TGCGTTCAAG TTTTGTTTCT
CAACCACCAA GTCACCCTTG CACCCTTGAC CGGCCAAGCT AATCGCTCTC CTTCCAGACT
CCGTCCTAAC AGCCCTCACC CAACTGCTCC TGCTCTACCT TCTCGTCAAC CAAATGGAAC
TCACCCGCAC CCCGTCGACA CTCTCCAAAG TCTCGATATG GACTATCGCC CTCATGGCCG
TCATTGACTC GTATGTGTTC AGCCTCAATG TGATTTTGGG GGTGATAAAT GTTGGGCATG
GTGGGGCAGA TGGGAGGGGA GGCGGGATGG GCGTTTGGGT AGGCGGGTTT GCTGCTTTTG
CGGGGGCTGT GATCTTTGGG CCTGTAAGAC TTTTCCTTGC CTTTCTTGAG AACGGGGAGA
AAAGAAGCTA ATAAAATTGT GATTAGAGGT ATGCGGTTAC GTTACATAGA ATTCAAGCTC
CCGAAGGGGC TGCTCCTGCT CCTGCCCCGT CTCCTGCCGC CGGTGCTCCT TTGACCACCA
CCACTGCTGC GTCCAACGGC AACGGTAACG CCAATGCGAA TGCGAATGAT CCAGAGGGGG
GCAACCCGGC CAACGGACAG GATGTGAACG GAGGGAGAAC CCGATTCGCC GGTTTACGAC
CCGTAACAGA AGGGCTTCGC GAGATGGCTA GCGCTCAGCC GGCTTTCAAA TGTACGTGTC
TTTCTCCACC CTATCTCCGC AAAACACCCT TTTCTTTCTT TTCTTCTGCT AATCCTCATC
CTTACCCCTT CACGCCAACT ATAGGGATCC TGTCGGCTCT TCTCTTCCTC CTCATCGGCC
CTTTTTTGTT CACCCCTTCC ATCTTCCCGA TCTTCCTTAC CTGCCTCTAC TCCTTCTGGG
TCCCGCAGAT ATGGAGGAAT GCGAGGAGGG GGAATGGAAG AGCGTTAGGG TGGGGCTTTG
TGCTGGGGAT GAGCGGGGGG AGGTTGGTTT TGCCGCTTTG TGAGTTATTT CCGTTCAATC
ATATCGCTCA ACGCTCAACA AACAAAAATG AACAGACGCA TTCGCATACC CCGACAATAT
GTTTTTCACC GAACCGAAAC CGTGGGTTTG GGGTCTAGTA GCTTGGCAAG TCTTGCAGGT
TGGGATGCTT TATGCGCAGG AGAGTTTTGG GCCTGCGTTC TTGTAAGTCT TGTTTTCCGT
TCGAAAGTTT ACGTTGTGAT GTCATGTGGA TCGGGTGCTG ATTTGGCCTT TGCCTGTGTT
CCTTTTTTTT CTTTTTTTTG GGATTATAGT CTGCCTAAAA GCGTACGTCT GTCTTGTGGT
TCTTTTGGAT TCGCAAAGAA GCTAACCAGA TGAACGTTTT TTCCATCTGT TTAGATGGCT
CCACCAGAAT CATACAACTA CCACCCCATC ATCTCCCCTC CTGACCCGGA GAACCCATCG
CCTTACGACG GTGAAACAAC ATGCTCGATC TGTTATGAAG AAGTGGACCT CTATCCCAGG
TCTGGCGCGC TCTCCCTCGC CACCCACGTC CACAGCCGCT CAAATTCACT CGATAAAAAA
TCAAGTTCCT CCCTCTCCCC CGTCATCATT TCATCGAAAG ACAGGATTTC AAGGGAGAAA
GAGTCGGAGA GGGAAGGCTT GTTGGGCGGT TTAGGAGGGC TGGATAGGAG GAATTATGCG
ATCGCGCCGT GTGGGCATGT GTTTCATACG AGTTGTTTGG CACAGTGGAT GAGTATCAAG
GTATGTCAAT GTCTCTCTTG TTTTCTTTTT TCTTCCTTCT TCTTTCTTTT TTTTGCTTTA
TCGATAGGCG ACTGTTTCGT CTTTTGGTCC CATCTCTTCC TTCCACATCA GTATCTCCCC
TAATCCCCAT GTTCGCTTTC CTTTCTTTTC ACGTATGCCC GTACGTTTAT TAAGGAGAAG
CTAATGAAGC GATTTATCAT AGACAATCTG TCCACTGTGT AAAAGGAGTT TACCGCCGAT
GTAGAAGTCT AGAATGAAAC GGGAGTTACG AAGCTGCGAT AGCTTGTGAG GGTTACGGGG
GGGGCGGGGG GATGAGGGAA TCGGTGAGAG TGAAGTAAAA GAATATTTCA AGGAGGTATG
GCGGAAGGCG ATTGAGTGGA TATACCACGC ATTTTGTAAG ATACCC
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| Protein sequence | MSQPQDAPTT PRSPRQPLPP PQQLPPDLEL NPPRPRPNLS SMLFLTAFFF FMSGNNHAPT
TGGMEIGPDG EVRLRMSELE YVRGLRDEWR GWLNGTEGNY TEPAIPDILP SSIAPPAFSH
DPLHHNHRFY TNITGFYRHA AVHPLSLSEP YTTSQPLDSL AAFWKGSQLP RLPINQTEGW
NETRAEEMRG EWDWARTVRW DMNLKERNVS SSVDPPDDLS HPAQKDGNEY PEWTWVKGAL
TLTSRPAPLS PSSSASTASD KTIVYDFYGL HHIPNGTYNL FALPEGMRPD IRRLPGLWGE
NRWGGEVGNE TRGIVLRELE KEVKVQEGLF VLGDMRQDDV SETTTCPLLI HLALPPIPSA
SLSAEIQAYH AEISNPTGLL ASMKRPPGYS QLPPGLGGVV VADGCGWALG VEGGEGLEVD
DFWRREVDYS VLTALTQLLL LYLLVNQMEL TRTPSTLSKV SIWTIALMAV IDSYVFSLNV
ILGVINVGHG GADGRGGGMG VWVGGFAAFA GAVIFGPRYA VTLHRIQAPE GAAPAPAPSP
AAGAPLTTTT AASNGNGNAN ANANDPEGGN PANGQDVNGG RTRFAGLRPV TEGLREMASA
QPAFKCTCLS PPYLRKTPFS FFSSANPHPY PFTPTIGILS ALLFLLIGPF LFTPSIFPIF
LTCLYSFWVP QIWRNARRGN GRALGWGFVL GMSGGRLVLP LYAFAYPDNM FFTEPKPWVW
GLVAWQVLQV GMLYAQESFG PAFFLPKSMA PPESYNYHPI ISPPDPENPS PYDGETTCSI
CYEEVDLYPR SGALSLATHV HSRSNSLDKK SSSSLSPVII SSKDRISREK ESEREGLLGG
LGGLDRRNYA IAPCGHVFHT SCLAQWMSIK TICPLCKRSL PPM
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