| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA08260 |
|---|
| Symbol | |
|---|
| ID | 3253826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 2272523 |
|---|
| End bp | 2274169 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 638253148 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_567068 |
|---|
| Protein GI | 58259311 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.632375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCCACAGCCC GTCATGACCA GCGCCAGCAA CACCGCAGAA GAGATCTTCA CCGTCCAGGC
CAAAGCCCAG CTCGACTCTG AAAAACCTCA GGCGTCCTCC GTCCCCAGCT CCCCGCTCAC
GCTCGACCTC GACAGCGACA AGGCGACACA GCTGATTAAT CTCCTGACAG ATGGGCTCGT
TTCCATCAGG GATGAAGAAG GGAGGTTTCT GTTAAAGTGT GCGTATCCTC CTCTGCCTCT
GCGACCGATT TTAAACTAAG GATAATCGAC GATAGTGGAC GACGGGACAT TGATCGATAC
CAAGGGCTGG GAACACCCGA CCGTGTTCTC CTGGGAGTGG ACACACGGCA TCGCCTTGAC
CGCTCTCTGC CACGTACGTC TTTTCTTCGC TCACAAAACG AATCTATCTA ACAGAATCGC
GCCATCCCAT TCACTCTCTC TCAGCACTCT GCCATCTCGC CCTCCTCCCC CGCCTCCCAA
AAATCCCTAG ACACTGCCAT CGCCTGGTTC AACTCCCAAT ACGCCCGTAC ATCAGGCAAA
GGCGCTCCCA AAAACATCAA CACCTTTTCG CCCTTTTACG CCTTGGCCTC CTTCTTGGAC
GATGGGCGGG AAAAGGACGA ACAAGGGAAA TGGAGAGCGT GGTGTGAGGA TTGGGCGCAG
TGGGTCGTGC GAGACGATGG CTTGCCAAAG ACCGAGGAAG GTGGATTCCA GCACAGTGCG
TCTCATTATC ATTACGGGGT CGGTAACAGA GGGGCTAAAA ACCAGACTCT CCATAGTAAC
CTACGCCAAC GCCCATCCTC AAAACCTCTG GGACGACACA CTCATGATGT CCGCCATCCC
GCTCGCCAAA ATCGGCATCC TCCTCAACCA GCCCTCATGG ATCGACGAAG CGGTATACCA
ATTCCTATTA CATATCCGAT ACCTCGCCGA CCCCGTCACC GGGCTATGGT ACCACGGCTG
GGAGTTTACC CCCGGTAAAC AAGGTCGCGC GGCGGAACTG GAAGGTGGAC AAGGGTGGAA
GGGAGGGAAG AATGGACATA ATTTCGCGAG AGCATTCTGG GCAAGAGGTA ATTGTTGGAT
CACACTAGCC ATCCCTATGC TGCTCTCCAT CCTCTCCCCC TCCTCCTCCT CTTCGTCTTC
CCCCCACCCG AAACCCCTCC ACCCAACCGA CCCCACCGCC CGCTTCCTCA TCCAAACATG
GACCCGCCAA GTCGACGCCC TCATCTCCCT CCAAGACCCC AACTCTGGCA TGTGGCACAC
CCTCCTCGAC GATCCCCAGA GCTATGTCGA AACAAGCGCT AGTGCCGGGT TTGTAGCCGG
GATATATATG GGTTTGAGAA TGGTACGTCT TCCCCCGCCT CTCCTGCCCC ACACGCTAAA
ACTAAAACCC TCACTAGGGC CTCCTCCCAC CATCCAAAGC CCCTTCCTAC CGCACCGCAG
CAGACGCCGC CCTCGCCGCC ATCCTCACCC AAATCCAACC CGACGGCCAG GTCGCCAACG
TCTCCTTTGG CACAGGTATG GGCGAAACCC TCCAGTTTTA CAGAGATATT GCGATTACGC
CGATGCCGTA TGGGCAAGCG CTGGTTATGC ATGCTTTGGT GGAATGGGAG AGGTTGAATG
AGCAAGGCAA GTAGAAGGGA GAAAAGT
|
|---|
| Protein sequence | MTSASNTAEE IFTVQAKAQL DSEKPQASSV PSSPLTLDLD SDKATQLINL LTDGLVSIRD
EEGRFLLKLD DGTLIDTKGW EHPTVFSWEW THGIALTALC HHSAISPSSP ASQKSLDTAI
AWFNSQYART SGKGAPKNIN TFSPFYALAS FLDDGREKDE QGKWRAWCED WAQWVVRDDG
LPKTEEGGFQ HITYANAHPQ NLWDDTLMMS AIPLAKIGIL LNQPSWIDEA VYQFLLHIRY
LADPVTGLWY HGWEFTPGKQ GRAAELEGGQ GWKGGKNGHN FARAFWARGN CWITLAIPML
LSILSPSSSS SSSPHPKPLH PTDPTARFLI QTWTRQVDAL ISLQDPNSGM WHTLLDDPQS
YVETSASAGF VAGIYMGLRM GLLPPSKAPS YRTAADAALA AILTQIQPDG QVANVSFGTG
MGETLQFYRD IAITPMPYGQ ALVMHALVEW ERLNEQGK
|
|---|
| |