| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA08180 |
|---|
| Symbol | |
|---|
| ID | 3253783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 2247278 |
|---|
| End bp | 2250341 |
|---|
| Gene Length | 3064 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638253140 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_567197 |
|---|
| Protein GI | 58259569 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.207902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTCCTGTAT TCTCATTATC ACGATACCAT CAAACTGACC GGGATCAATT TTTTCAGCAT
ATTCCAAATC ATATATACGA TACTTCTTTG AGAGAATAAT GGACATGGAC GATGCTCCTA
GCCCTTCTCA GCCCATAGCA GGCCCTTCGG CCTTCAAGAA GGCCCCAGCG TGAGTGTCTA
CGCAGCAGCA CGACCTTCTT CCGCGCGATG GGCTGAACTC ACTTGGTTCA TATTAACAGC
AAAGTAAGCT GTCTCCAGTG CCGAGCAGCA AAGGCAGGTG ACCTTTAACC GGCCATTCAG
TGCGGCAAAC TGACCGTTCC TTGCAGAGAA AGTGCAACAC CCCGGATGCC AATACTACTT
GTCGAAGATG TCAAGGGCAT GGTCTAGTCT GCCAATACAC GAAACATCGT CGCGGAAGGA
AGAAGAAGGT CCTCGAACGG AATCAGTCCT CAGCTCGCCC ATCTCACGAT CCCGTCCCTA
GTAGCATGTC ATCTACGGCA GACATTCCCA ACACAGGCAT TGCCGACACC GAAGTTGGAG
GCTTATTTGA GTCAGTTCCT CCCCAATCAC ATCCTTCGTC TCTCCCAGCA ATATCTCAGA
ATGCACGACA TGCATCGATA GTCAACGATG TTTCGCTCGT TTCTGCCAAT GAAAGCACCA
GCTTCTTGAG CCATCAAGCG GATGCCTCTT CTACACACAA AAAGCTACCA CACGAGGAGA
TCGCTTTGAC TGGTAGAAGG ACAAACACCA TTGGCCGGTT TGGAATTCAT TATTCGCACG
TTATCCCCAA TGAAGGAGAC TCGTCGCGTC AGTCTTACTT TTCCATACTA GCTCGAAGGA
CACGCTGATT TTGCGTACAG CGTTCGTTGG ACAACCTGCT CCAAGTAGCA ATGTGTTGAC
ACAAGACCAG GACATCCTTA TACAGCGATT GAGGCCTGAC TGTCCTGATC CAGTGAGAGC
GGGATTATTA ACAGATCAGG ATGCGTTCGA AATGTTTGAG TTGTAAGTGT CTTGTAACTC
TCATTTCCTG ACCCTCCCTT CCCACCTTCT TTGATATGCT GGACGCCTCG CTTTTTCTTC
CTTCCTGCCT ACTAATCCAG CTTTTCGCCC TTCTCCGTCT ACCATACTCT TCTAAAATTG
AGCTATGCTG ACAAATTCCA GTTATTTCCG CCATTTGAAC GCGACTGTCG CTATCCTCGA
CCCAGTCATC CACAATGCTA CATACTGCCG ACATCATTCA CCTCTACTCT TCACTGCGGT
TCTCACCGTC ACTGCGCGGA TCATGCGTCC CAAGGCTTAT TCTGCATGTC TGCTTCTGTC
GAACAGGTTT GTAGGCCAGG CGGTCGAGTT TGGATTATGT TCGATTGAGA TCGTACAGGC
TTTAAACCTT CTCACACATT GGAAGAAGCC AGATGACGAG ACGAGTTTTA GAAGAGTTGG
GTATGCTATC CGGTTAGCGC AAGAGTTGCG ACTGGACACA AGAGGCCCTA GGCCGCTGCC
AAAAGCTGAA AGACAGGCTA GAGAAATTCT GAATCGAGAG AGGGCATGGT TCAGTAAGCA
TGCTTTTTTG TTCACACGCA CTTGTTGACG ACACCTAGAC CTGATTGTTG CCGATTATCA
GTATGTTTTC CCCACTTGCC ATTAATTTTC CATGCTAATG CTTCGAAGCC TGGCCATCCA
TCACTCACTT CCGCGTATGA TCAAAGAAGA TGTCGACGAT CCTGCCGACT GGGTGCTGGA
ACACTCCCAT CTTCTTACTC CTGGAGAATC CTCACTCGGC CCCTTGGTCA CTTTTAGCAG
AATGTGCCGT CTCTACGCCG ATAGTCTTGG AGCTATGAAC GGCGATCCTT CCAACATGCG
GATGCTGAGC TGGATAGAGC TCGAATGGAA AAGATGGAGG AATCGCTGGC TGGAGGATAA
TGGTATATCG CGCTCCAAGC TCCTCAAGTA GACCGAAAAG CTGATCATTA AACAGAACGC
TATAATTTTG TTCAATCTCA AATCTCCACA TTCAGGCTCT GTGATTCATA CTTCCGATTC
CACATTTGCG AGTATAGACT TTTATTTACT GCGAGATACG AAGCACCTGG TCAAGTGTTG
GATACTACCC AGCCTTCGCC GCTGTCAATA GCTTTTTCCG AGTGCGTAGA TGCTGCTTTA
GGAGTAGCGC TGGTGGTTCA AAACGACTTT GTACCGTATG GTTACTTGCC TTATTGCTTT
AACCTGACTT GGGTTGCCCT GGCAGTCAAT TCCATCTGGC TGATCAAAGT GAGTTCATCC
CTAAAACCTT GCTGGGTTCT TGTCTGACTA GCTATCATAA CAAATTAGAA CATTTCACCG
ATGACCTCTG CCGACCGCGC ACGCGTCATC CGTACCCTCT CCGACATCCA GTTCTCAATC
GAAGAAGCGT CTTGCTCTTC CGACGACATG GCCGCCTATA CACACCGTCT CCTCAAGCAT
CTTCTCAGCG GGGTATCCCC CGAATGGCAA CTCGCATCCT TCATGACTGA ACCATATCCC
CACACTTCTG TCGACGCTAC TTCCACCTCC CAGCATACTC AACAAAAAAC ATTGTCAAAC
TCTGGTTCTG CTGTTGCGGC AGATCAAACT AGCCCTCAAA ACTGGGCACC TTCAAGTGCG
CAAGAGATGA TTCAAGGATA TCTGTGGAGT CAGCCAAACG GGTATGTGCC TCCTCCTGCT
GGCGCCGGAC CTATGAATGC GACTTCGCTG GAAGATGCAC AAGAGATGGG CACAGTGCCA
GGCATCCAAC CGAATAAAGA GTACAATGAC ATCTTCCCTG CTGACGATGA TGACTTTTGG
TGAGTTATTT CCAAGTTTGA GGTTTGACCT TCTTGAGCTG ACGCGGGGTT GGTACAGGAA
ACATCTTTTC CCGTTTGGTA GTATAGGCAA TTAGTTCGGC CGTTCACCTG TTGTTTAGTG
TATCATAGAA TTATCATGCA CGTCACAATG TAGCTCCATG CTGGAAAGCA GGCCATTTTG
GTGGACATTT TATCAGCGTG CCATTTATAA TGAGTGTCTA TTTCACCAAA CTGGAAATTC
TTAG
|
|---|
| Protein sequence | MDMDDAPSPS QPIAGPSAFK KAPAKVSCLQ CRAAKRKCNT PDANTTCRRC QGHGLVCQYT
KHRRGRKKKV LERNQSSARP SHDPVPSSMS STADIPNTGI ADTEVGGLFE SVPPQSHPSS
LPAISQNARH ASIVNDVSLV SANESTSFLS HQADASSTHK KLPHEEIALT GRRTNTIGRF
GIHYSHVIPN EGDSSPFVGQ PAPSSNVLTQ DQDILIQRLR PDCPDPVRAG LLTDQDAFEM
FEFYFRHLNA TVAILDPVIH NATYCRHHSP LLFTAVLTVT ARIMRPKAYS ACLLLSNRFV
GQAVEFGLCS IEIVQALNLL THWKKPDDET SFRRVGLAIH HSLPRMIKED VDDPADWVLE
HSHLLTPGES SLGPLVTFSR MCRLYADSLG AMNGDPSNMR MLSWIELEWK RWRNRWLEDN
GISRSKLLKY EAPGQVLDTT QPSPLSIAFS ECVDAALGVA LVVQNDFVPY GYLPYCFNLT
WVALAVNSIW LIKNISPMTS ADRARVIRTL SDIQFSIEEA SCSSDDMAAY THRLLKHLLS
GVSPEWQLAS FMTEPYPHTS VDATSTSQHT QQKTLSNSGS AVAADQTSPQ NWAPSSAQEM
IQGYLWSQPN GYVPPPAGAG PMNATSLEDA QEMGTVPGIQ PNKEYNDIFP ADDDDFCSML
ESRPFWWTFY QRAIYNECLF HQTGNS
|
|---|
| |