Gene CNA08070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA08070 
Symbol 
ID3253650 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp2220313 
End bp2222197 
Gene Length1885 bp 
Protein Length581 aa 
Translation table 
GC content49% 
IMG OID638253129 
Productpathway-specific nitrogen regulator, putative 
Protein accessionXP_567186 
Protein GI58259547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.134883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATA ACGGCAATCC TGCATCAGGA CAAGAGTTCC AGTTTTTAAC GGGGAATGAA 
TGGTCCCCCA ATACGGATTG GAAGATTGCA AGCGCGTTGG AAAGCCAAAC AGCTTTCATC
AGTGGTAACC CGGGGGAAGG GGATGATTTG GAGCTGTTCT ATTATCGATT CGTAAGTGAC
ACGCAATATC CCCCCCAAGA CAAACGAGCT CATCCTTGAT ATCAAGTCCG GCTCAACCGC
CATTCACCCT GGTATTAATC GTGTAAGCCT AAAGCTTCAG CGACGTGATC CATCTTTTCC
ACCTATGGCC ACCGCTCCGC AACCTACAAA CGAATCACCA TCTGCGGACT CGTCATATCT
TGGTCTCGAC CTCTTTGACG CCACAGGTAT GCCGCATTCA CACGTCTGGG AACCTCTATT
CGACCTTTTC TTTAAGCATA TGAGTCAACA TTTCCCGAGC TGTAGTCGCC AACGTATGAT
GGAAAGGTTC CAGACAGGTA CAATGAGTCA GTTCTTGGCG TGCTGTATCT GTAGTTTGGG
CGCGCGTTTT AGCGATGTCA AGGACCGAGC GTGGGCGGCT GCATCATTCA TTGCTAAAGC
ACAAGAGCTT GTCCCGCCTC TTCTACATCT CCCAACACAC GATGTTCTCA CGGGCATGCT
TTTCCTCGCC TGGTCAAATT ACGGCCAAAA TTCGGACAGC GGTCTGTGGC AGTACTCTGG
TATGGCCATC CGCATGTCAT CCGATCTCGG CGCACATGAA GTATCTGAAC TCTACGAATC
ACCCGCACAT TACGCTCGTA ATCAACTGAT GTTTTGGTCA TTATTCGTCA CTGATCGTGT
GGTGGCGTTT GCCACCGGTC GACCGGCAAG TATCCCGGAA GATATCATCG AAATACCTTT
ACCAAAGGAC GAAGACTTTT TTCCTGATCC GGCACGAAAC TTGCCTGATT CCCCGTTCGA
ACCTGTCGAG CCCGTACCCT TTGTCCAGCT GGTAAAGCTC ATGGTCATCG TCGGACGGAT
ATCCAACGTT CTCAATGGCC GGCGCGGCCG TGCACTTACC CTCGTCTCCA CCTCTGAACC
CTTACCCGAG CTCCTCGCAG AACTTCAACT TCGCCTTGTC ACATTCTACT CCAACTTGCC
CGACTCTCTA AAATGGAGTG CAGACAACTT TAAGCATCAG CACACGCGTG GACATTCAGG
CACTTTTCTG ACATTACATC TCTGGGCCAA TGCGGTGTTA GCATTGATTT ATCATCCAGA
GTTGTTGAAG AGCCCGAGTG GGGTTGAGAC GCCGTTGAAC AGGAGTATGC CGAGGAATGT
ACAGCTGAGT CTGGCAAGTT CAAGGCAGAT CGTGGAGTGT ATGATCTTTG CGGACTTGGT
GGATTCTACC AGCTATGTTG GTGTATTTCT TTCAGTTCAA GTATATATGG TTGGCTGACT
ATGGTGATAG ACTTCTTCCC CATACCTCGC TCAACCCCTT TTCGTCGCCG CGTAAGTTTT
CTTGGCCATC TTACACATTC TAGGACTCTT TCTCATCCTG CTTATTAGTA TGGCCTTTAT
CCACGAGATG CGTTCTTTAC AAGCAAACAT GGATCCCGCC GACATGCCAC CGTTCTCTGG
CGCCGCATCT GGCAATAACG ACAGTAGCAA CAACAATAAT CTTCATCCCA AAAGTCAATC
TTCCAATGCT ACGGACATGC TCATGTTGTC CATGGCGAAG CAAAACTTTA GCACGCTATT
GAATGCGGTA CATAAGATGG AAGAGTACTG GGCAGGGGTG AACTATGTTG CTACCTTGTT
GGAAAAACGT AAGTCCTCAG TTTACTTTGC AGATCGGCAT GGAGCTGATG GATGTTGGTG
TAGGATCCGG TTTTCCAAGA CCTAG
 
Protein sequence
MSNNGNPASG QEFQFLTGNE WSPNTDWKIA SALESQTAFI SGNPGEGDDL ELFYYRFTNE 
LILDIKSGST AIHPGINRVS LKLQRRDPSF PPMATAPQPT NESPSADSSY LGLDLFDATG
MPHSHVWEPL FDLFFKHMSQ HFPSCSRQRM MERFQTGTMS QFLACCICSL GARFSDVKDR
AWAAASFIAK AQELVPPLLH LPTHDVLTGM LFLAWSNYGQ NSDSGLWQYS GMAIRMSSDL
GAHEVSELYE SPAHYARNQL MFWSLFVTDR VVAFATGRPA SIPEDIIEIP LPKDEDFFPD
PARNLPDSPF EPVEPVPFVQ LVKLMVIVGR ISNVLNGRRG RALTLVSTSE PLPELLAELQ
LRLVTFYSNL PDSLKWSADN FKHQHTRGHS GTFLTLHLWA NAVLALIYHP ELLKSPSGVE
TPLNRSMPRN VQLSLASSRQ IVECMIFADL VDSTSYVGVF LSVQTSSPYL AQPLFVAAMA
FIHEMRSLQA NMDPADMPPF SGAASGNNDS SNNNNLHPKS QSSNATDMLM LSMAKQNFST
LLNAVHKMEE YWAGVNYVAT LLEKHRHGAD GCWCRIRFSK T