| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA08040 |
|---|
| Symbol | |
|---|
| ID | 3253669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 2214336 |
|---|
| End bp | 2215739 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638253126 |
|---|
| Product | transporter, putative |
|---|
| Protein accession | XP_567183 |
|---|
| Protein GI | 58259541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGTA ATGGCTCCTC ATCCTTTGCA GCCCCACCGT CGGCACGCAT TCTCGTCATC
CCTCCTCAAT TCCATTCTAT GACAGCCGGC GCAGGGGCAG GCCTTGTATC ATCCATCGTA
ACATGTCCTC TCGATGTTGT CAAGACTCGT TTACAGGCAC AGGCAGCCTC GGTACACCAC
AAGGACTACC AAACAGTTGA AATGATCATT AAGGATATAT GGACATCAGG CGGCTTCAGG
GGTTTTTATA GGGGACTAGG ACCGACACTG GCTGGGTACT TGCCTACATG GGGAATATAT
TTCACCGTGT ATGATTTGGT CAAGGACAGA TTGGGAGCTT GGGCGGCGCA TAGTGGTGAG
TTGTCCAGAA GGAGATTAAC AGGAGAATAT TAGCTGATAC CCGTTGTAGA TTTACCTACA
AAACCGTCGA TGGTGCATAT TGTAGCAGCA ATGACGGCTG GAGCCACCGG AACGTGTATG
ACTAGCCCTT TATGGGTAAT CAAGACTCGA TTAATGGTTC GTGCTCGATT CCATCGCTAT
CTGCGCCTTG TTGTTTGGAA ATGCTAATAT CCAAGTTAGG CCCAAGTAGG TCCATCCGAT
CAAGCACGAT ACAGAAACAC TCTCGAGGCA ATAGTAGACA TTTACAGAAA CGAAGGATTT
AGAGCATTTT ACAAAGGACT CTTACCGTCA TTGATGGGCA TTAGTCATGT TGCTGTTCAA
TTTCCTCTCT ATGAAAAAGC AAAGTCCTGG TCCGGTAAGT CTATCTCAAA AGTATTGCTT
TGTACCATAG CTGAAAGGCA AGGGATGCAG ATAACAACAC AGAGGGCGAC CATTCCTCCT
TAACACCTTC AACGATCCTT ATCTGCTCTG CATTCTCCAA AATGGTTGCT TCAATAGCAA
CCTATCCTCA TGAAGTCCTC CGAACCCGTC TCCAAATCCG CAAATCATCT CCTAAATCCA
ATTCTTCTAG CTCCGTTTTC AGTTCCAACC CTTCCAAACC TTCTCATCCA CCATTACCAT
TCTCCTCAAT GCCTTTCAAC TACCTTCCAT CCGCGGATGG CAAATCTCAT CCACCATTAG
ACGCTTCCGA CTCCACAGCT TCTCATGCCC ACCCTCCATC AGATCGCCAG ACCAGACCCT
TATGGCGTTC ATTGATCAAG TTCCGTAAGG AAGGCGGGAT TATCGATACT TTTTTGAGTA
TAAAGAACCA AGATGGTTGG AGAGGATTTT ATAGAGGGTT GTCTATCAAT TTGATCAGGA
CTGTGCCCAG TAGCGCTGTC ACAATGCTTA CGTGAGTGCG ATTTTTTTTT TTGACCGAAA
AAGGGCAATA ACCGTATTCC ATCACTGACC CTGTCATGCA GATACGAACT TATCATGCGT
AGATTGTCTT CACCCACATT ATGA
|
|---|
| Protein sequence | MSGNGSSSFA APPSARILVI PPQFHSMTAG AGAGLVSSIV TCPLDVVKTR LQAQAASVHH
KDYQTVEMII KDIWTSGGFR GFYRGLGPTL AGYLPTWGIY FTVYDLVKDR LGAWAAHSDL
PTKPSMVHIV AAMTAGATGT CMTSPLWVIK TRLMAQVGPS DQARYRNTLE AIVDIYRNEG
FRAFYKGLLP SLMGISHVAV QFPLYEKAKS WSEGDHSSLT PSTILICSAF SKMVASIATY
PHEVLRTRLQ IRKSSPKSNS SSSVFSSNPS KPSHPPLPFS SMPFNYLPSA DGKSHPPLDA
SDSTASHAHP PSDRQTRPLW RSLIKFRKEG GIIDTFLSIK NQDGWRGFYR GLSINLIRTV
PSSAVTMLTY ELIMRRLSSP TL
|
|---|
| |