Gene CNA08010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA08010 
Symbol 
ID3253708 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp2209196 
End bp2210413 
Gene Length1218 bp 
Protein Length169 aa 
Translation table 
GC content47% 
IMG OID638253123 
Productubiquitin-conjugating enzyme e2-17 kda, putative 
Protein accessionXP_567181 
Protein GI58259537 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.54483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCACT CAACTCGCAC GACCATCTTC ATTTGCCCTA TCCTAATTTT TGTCTGCCTG 
AACTAGCTCG CAATGGTAAG TCCAATGCGT CTGTAATACA TCTGCAAAGT CTTCGCTTGG 
AAACAGTGGC TGGAGCTTGA GATCGATGCT GAATTATGTC GTAGTCCACA GCTGCCAAGC 
GACGTCTGAT TCGAGACTTT AAGCGTCTCA CTTCTGATGC CCCCATCGGT ATCTCCGGCA 
GTCCCAATCC TGACAATATC ATGGTATGGA ACGCCGTCAT CTTTGGACCT CGTGAGTTCC 
ATTTTCGCCG AAGCATCGTT ACTCTTGCTT CTTGCCGAGT CAAAGTAAGC TTGTGACTAA 
CCTTCCATTG CTCTGGGCAG CCGAGACACC ATTTGAAGAC GGCTCTTTTC GACTTACTCT 
CACATTCACC GATGCTTATC CTAACAAGCC CCCTACTGTT CGCTTTATCT CCAAAATGTT 
CCACCCCAAT ATCTATGCCA ACGGCGAGCT TTGTTTGGAT ATCTTGCAGA ATAGATGGAG 
TCCGACGTAC GATGTGGCGG CAATCTTGAC AAGTGTGCAA AGTCTGCTGA ATGACCCCAA 
CCCGGCTAGG TGAGCATAAC ATTGTATATA TAGAACTGCG CCAACTTGCA TTTAGTCCTG 
CGAACGTCGA CGCTGCTCAA CTCTTCAAGG AGAATCTTAA GGAATACGAA CGGCGCGTCA 
AGGTACGTTT GCTAATTTGC TTTCATAGAT AGATTGTTAT CGAAACTAAC AATGGATTTA 
GAAAACCGTT GAGCTTTCCT GGGTGGACAA CGCAGATGAG ATCGAAGCCG AAGTGGTTGA 
AGCGGACGAA GGGAGCTCAT CATAAGGGCT CTGTAATCTT GTTTCATCGA TGTCCGCTAA 
TCATCAAGGG GAAGTCCTAG CGCGGTATAC TAGATTTCGA GATGGTAGAA ACAAGTGGTG 
ATGGTAGAGA AGAGAGAAAG AAGAGGAAGG ATCGATCAAC GACTTAGGCG ATTTGGCTTT 
GTGCAACAAA CCTGCTCAAG CAAACAATGA GGGAGACGCG GACGAAGACA CGATACGGGT 
AGCTTATCTA ATCCACAGAG AAGGCAGAAT CTTGTATTTC CTAGTTTTTC CATCAATACG 
CCATACAACA TTATCCAGCC CCGATAGCGA TCCCTTTACA GGCTGTTCCA TGCATATCCC 
GTCTTTCGGT CTTTTGAG
 
Protein sequence
MSTAAKRRLI RDFKRLTSDA PIGISGSPNP DNIMVWNAVI FGPPETPFED GSFRLTLTFT 
DAYPNKPPTV RFISKMFHPN IYANGELCLD ILQNRWSPTY DVAAILTSVQ SLLNDPNPAS 
PANVDAAQLF KENLKEYERR VKKTVELSWV DNADEIEAEV VEADEGSSS