Gene CNA07620 details

Gene Information

• Locus tag: CNA07620
• ID: 3253907
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: +
• Start bp: 2089109
• End bp: 2091351
• Gene Length: 2243 bp
• Protein Length: 401 aa
• GC content: 51%
• IMG OID: 638253085
• Product: translation initiation factor, putative
• Protein accession: XP_567112
• Protein GI: 58259399
• COG category: [J] Translation, ribosomal structure and biogenesis; [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0513] Superfamily II DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTCATCACCT TAGGGTATAA AACTACTGAA ACACCACCTA CAAAACAACA ACCTTTGTCA 
GCGAACACAC GCTAGGCAAA GAACACTCAG AAGAAACCAA CAAAAGCAAT CATGTCTGAG 
TGAGTATGCA CCCGGAAACG CCAGGTGGAG GTCGGACTCG TAGCGCGCAG TGTGGAAGGA 
AGGGATTCCG ACTGGTGGCG ACAGCTCGTG GCGGGCGTTG TAAGGATGAA CAGGAAGGAT 
ATGACGGCAG CGCGTGGATT GAAAGCATGA TGGAAAAAGG GCGTGACGAT GGCGACGGGA 
TATTCGAGAT GCGAGCAATG TGTGATTGCA TGCTAACGCT GTGTCTAGCA CTAAGGGTGC 
GGCCGAGCAG GGCCTTCAAA TCGACGGTGA CCTCATCAAC TCCAACTGGA ATGAGGTTGT 
TGACAAGTGA GTAGAGGTGG TATGTGCTTT AGATGAATAA GTGCTGACGA GTGGGGTAGC 
TTCGACGACA TGAAGTTGAA GGGCGAGCTC CTCCGTGGTA TCTACGCTTA CGGTTTTGAG 
CGACCTTCTG CTATCCAGCA GCGTGCTATC ATGCCCATCG TTACTGGCCG TGACTGCATT 
GCCCAGGCTC AGTCCGGTAC CGGTAAGACC GCTACCTTCT CCGTTTCTAT CCTCCAGAGG 
GTAAGTCTTA TCTAAGCAGA TATGATGTGC GGGTTTCAGT TGCTAAGCCA TCTTTTATCT 
AATAGATCGA CACCACTGTT AAGAAGACCC AGGCTCTTGT CCTTGCTCCC ACCCGAGAGC 
TCGCTCAACA GATTCAAAAG GTCGTTATCG CTCTCGGTGA CTACCTTAAC GTCGACTGCC 
ACGCCTGTGT CGGTGGTACC GCCGTCCGAG AGGACATTGC CAGGCTTAAC GAGGGTCCCC 
ACATCGTTGT CGGTACCCCC GGTCGTGTCT TTGACATGAT CAACCGAGGT GCTCTTAAGA 
CCGAGGCCGT TATGATGTTC TGCCTTGACG AGGCCGATGA GATGCTTTCC ACCGGTTTCA 
AGGAGTCCAT CTACGAGATC TTCCAGCTTC TCCCCGGAGA GACCCAGGTC GTCCTCCTTT 
CCGCCACCAT GGCCCCTGAG GTCCTCGACG TCACTAAGAA GTTCATGAGG GACCCCATCA 
GGATTCTCGT TAAGAAGGAC GAGCTTACCC TTGAAGGTAT CCGACAGTTC TGTAAGTCGC 
ATTGTACCAC CCAGATTCAG ACATGTACAT CGCTGACATC CCATTAGACA TTAACGTCGA 
GAAGGAGGAG TGGAAGCTCG AGACCCTTTG CGACTTGTAC GAGACCGTCA CCATCACCCA 
GGCCGTCATC TTCTGCTCTA CCCGACGAAA GGTCGACTGG CTCACTCAGC AGCTCCACGA 
CCGTCAGTTC ACCGTCTCTG CCATGCACGG TGACATGAAG CAGGAGGAGC GAGAGGTCAT 
CATGAAGGAG TTCCGATCCG GTTCTTCCCG AGTTCTTATC ACCACCGACC TTTTGGCCCG 
TGGTATCGAT GTCCAGCAGG TTTCTTTGGT CATCAACGTG AGTATACATC TATAGTCGAA 
AGTGGAGTTG GAGAGATTAT TGACAATTCA ACGACCAGTA CGACCTCCCC TCTTCTAAGG 
AGAACTACAT CCACCGAATT GGTCGAGGTG GTCGATTCGG CCGAAAGGGT GTTGCTATTA 
ACTTCGTTTC CAACGAGGAC AAGAACATGC TTGAGGAGAT TGAGACTTAC TAGTAAGTTT 
CATTTGATGT AACCACAGTT TTGACACTGC TAACCCAACT CCACAGCAAC ACCCAGGTTG 
AGGAGATGCC TCTTAACGTT GCCGACCTCA TCTAAGTCAC CACCCCTTTA TCTCACGCCG 
AAAATTCCCG TACTCCCTCC CCTTTAACCC CTCTTGTAAT CCTTTTTCCT TATCTATCTT 
ACCCTTATGT GCCCATCGTC GTGGAGAAGT CGTCGGAGAG GTCGGCGGCC GAAGCGATTG 
TGTGGAGGCA GGGTGATGTT GTTCGAGGAG GCGGCTTTAG TGGACTCATC TAGGTTGGGC 
AGACGGTTCG CTTTATAGGT TGCTTTTAGT TTGTGCATGA TATTTCTATT CCATTTCTGA 
TTACGTGTTG GTGTTGGAGT CTGGGACGTG ATGCAGGACT ACTCTTGGGT AATGTTTGAC 
GTGTTATTGG TCGTAAACTT TGTCCCATAT AGGAAGATGT GGTACAGAGC CAAAAACAAA 
ATCCATGAAT GAGAGGTGAC AAG 

 

Protein sequence

MSDTKGAAEQ GLQIDGDLIN SNWNEVVDNF DDMKLKGELL RGIYAYGFER PSAIQQRAIM 
PIVTGRDCIA QAQSGTGKTA TFSVSILQRI DTTVKKTQAL VLAPTRELAQ QIQKVVIALG 
DYLNVDCHAC VGGTAVREDI ARLNEGPHIV VGTPGRVFDM INRGALKTEA VMMFCLDEAD 
EMLSTGFKES IYEIFQLLPG ETQVVLLSAT MAPEVLDVTK KFMRDPIRIL VKKDELTLEG 
IRQFYINVEK EEWKLETLCD LYETVTITQA VIFCSTRRKV DWLTQQLHDR QFTVSAMHGD 
MKQEEREVIM KEFRSGSSRV LITTDLLARG IDVQQVSLVI NYDLPSSKEN YIHRIGRGGR 
FGRKGVAINF VSNEDKNMLE EIETYYNTQV EEMPLNVADL I