| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA07360 |
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| Symbol | |
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| ID | 3253578 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 2011335 |
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| End bp | 2016131 |
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| Gene Length | 4797 bp |
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| Protein Length | 1312 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638253060 |
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| Product | ubiquitin-specific protease, putative |
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| Protein accession | XP_567052 |
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| Protein GI | 58259279 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5533] Ubiquitin C-terminal hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGGC CGCCGTCCCC GCCATCGTTC ACAGGGCTCC CGCTCTCGCA GCTGCTGCAG
TACGCCTCGG ACGACAACGG CGCAGGCAGC CACCCGCCCA AAGTATGGTT CGAACGCGCA
TGCTACAACG CCGACAAGGC AAAGTTGGCA GAGCGCAAAC AGAGCAAAGA GGACATGTTC
GTCAGCTACA GCAGGGCGTG CCAGTCCTAT ATCAACGTTG CGATGCACAA CGACTGGCCA
GAGACCAAGA AAAAGGATCC TCAGTTGGCC GCCAGAGTCA AGGATTTCAA GCCGGTATGT
GCCTCTCCGC CGCTGTCCGT ATATGCCCAC ACTCATACCA TCTAGATGTA CGATTCATTT
GTCGCAAAGG CCAAGGCTTT AAAAGAGGAA CTTCGGCATG CGGAGGCATC TTCACCCGCT
CAGTCCAAAC CAGAATCATC CAAACCATCG GTATCAAGAC AACGATCTGG GCCTGAAATA
ACATCAATCG GCAACATCAG AGATCGAATG CAGGCACTTG CCGGACACGG AATGGAGGTT
GAGACTATTC AGTCGAAGCG CTTAAGTAGA GAGGCTCCTG CCAAAGCGCC AAAGCCTGCT
GCATTGAGTA GCGTGACCAA CTCTGCGGCA AGGTCTAGGA GTGGCAGCGA GTCGCGACCT
TTGTCCACAA CAACGACCAA TGGGCGGCAA CTCGTGGTCA CTGCTTCATC TAAACCACCA
CCAACTGCGT CACAAGAGAA ATCACCTCCA TCTGCACCCG TCAACGTACA AGCCAATGGA
TCGTCCAGCA GATCACGGCG ATCCACTTTG ACGAGTGAAG GGCAGGGCAT GAGCGTATCT
GTTGGGTCTG TGGCAGCTTC ACCGGCGCAA TCACCGATGC CCACACCTGC AGCTGGCCCA
TACAGATCGC CCTTACCCTC CATCCCTTCC TCTCCTCAGC CTCTTCCAGC ATCTCATCCG
CCATTACCCT CTCCCGAGCC ACCACGACCA AATGTTCCCA TCAACTCGTC CGACATGGAG
TCTCATCCTG AAGACGGCTT GGCAGAGTTT GAGCGTGCTT TCCCATCTCT CTCCGAATTT
GGGAAACAAT GGGATGGCGA CTCGTTACAG CCTGACACGA ATAGTAATGA TATGTACCAC
GCCCCGCAGT ACCCGAAACC TCCAAAGCAA CCGCCTATCT CTGAAGAAGA CGATATCCCA
GACCTTCCAT CTTTACCTTC CGTTCCGACA TTCAAGCCCG GCCTGCCTCC CCCTCCTGCT
CGACCGGACG CATATGCATT CTCACCACCA GCCACTTCCC CGTCTGTTCA AACTCGGGGA
CAAACTCCCG TCCCCCGCGG GCCATCACCT CCTAAACCCG ATGTTGGTTC GGGTGTCGGT
CTGCATCGAC CGGCTAGTAC GCCCATGCCT AATATTGCTG GTTTAGATCT GATAGATATG
CCTGATGGGG ATGTACCTCA AGGAAAAGCC ATGAACGGTG GTGGAAAAAT GGAAGCTCTA
AATTCCCCTG AGGCTGTATC TAGGCCTCCC CAATATTCTG ACGCAACATC CCGTCCTACT
CCAACCACAC GGCATCCTCT TCCCCAACTT CCTTCTCGCC CTCCCACCTC TGATGCCGTA
CAGCCTACTC TCAAACCCAA GGAGAAACCA AAGTTTCCTT TTAGTAATTC TATCACTCCG
GATGAACTTC GCGAATACTT TCTCAATCCT TCAGTGGAGA TGTTGTTCTT GGACATAAGG
CCGGAAGACG AGTGGAAGAA GGGATATGTA GGGAGAGAGT ATGAGAAGAG AGGTGCGAGG
GTGGAGATTG TGTGGCTGGA TCCGACAGTC TTGCTTCGTG AAGGGTAATT GACTTTGTTT
TCAGTGAAGA TGACAAGGCT AAAAAATGTA TTTTAGTATG ACCGCGAGCA AATTAGAAGA
CGCACTTTCC CTTTCCCCCG CTGTTCAACG CGAAGCTTTT CAGAATCGAC ACAAATACGA
CCTCGTCATA GTCTACGACA CTCGTTCTCC CGTATGGCCC AAGGACGGTC CTTTAAACCG
AATTTGGGAT ATATTCTTTA TGGGCCACGA CGAGAAGCGT TTGCAGAGAA ATCCCGTCAT
TTTGGTAGGA GGTTATGAAA AGTGGAGAGA GTTTATCAAG ATGCGAGCGG CTAGGCATGC
ACATACGGCA AAGGGGAAGG ATGTGAGGGA GGGGGTGAAT GGGTATGCGG TGATGCGATC
GGATGTTGTG TCCCCTGCGC CTTCCGAGAT TAGTGTTAAG AATGCGAACA GGGAAGCACC
GGTCTACCAG GCATCACAGT ATGCGAAGAG TATCGCTGAA AACGTGAGCT ATTACATATA
TATCCACGTG TGCCATGTGT TAATGTCTTG ACGTCTTTAC AAGTTTGGCG CTGGACCCCA
ATCCATGACG GGAGACTCGT ACCGTCCCTC CACACATTCT CACTCCCAAT CGCAACTCTA
CACGCCCACA TACAGGCATC ATCACTCCAG AACGGGCTCA ACTTACTCCT CCCACGGCGC
TATTGCCGCT CCTCCACAAG CTTCCATTCA CCCCGGACCA GGTGCCAGAC GGCGAAGCGA
CTACATTGAA CATACAGGTC AATCGTACTC TGGCTCAGCC TCGACTTCCC CCTCCATACA
ATCGACTGGC ACCACACCTC AACCTCAACA GCAATACTAC GCTTCCCCAT CCCTCCCTGC
TTCTAACTCC GTGACACCGT CCATATCATC CATGGCCTCT CCTCGGGCAT CGATCGATTA
CCCTCAAGCG CACGCATTGG CAAAGGTACC AGTCCCGATG CCTCCCCCAG CCGTGGCGAG
ACCGATGGAA CGACATGATG CGTACACCAG CACACATGTG CATGCGCAGA GTTTGGTACC
GACTTCTTCC GGTTATGGTC AACTTCCATC ACAAGGGCAA GTGACGAGGA GTCAGGCGAT
GAGGCGCATG GACACTGTGC CTGTTGGTGG GAAGGATAAA GTGGGGTATT GGCGGGATGT
GGTGTTGGGT ATTACCGGGT TGAAGAACCT TGGAAAGTAA GTTTCACATT TCCTTGAAAA
TGATAATTGT AAAAAGATTC TGACTGGGAT TAGTACTTGT TATATGAACT CGACAATACA
GTGTCTCAGT GCGACATACC CATTCTCTAC GTTTTTCCTT GGTGAGTGGC CCATATGCCT
AACCGCCGAG ATATCAGACT AATATGTATG GATGTCCTTT TAGATGGAAC GTTTGCACGT
TCAATAAACA AAGAAAATCC CTTGGGGACG AAAGGCGAGT TGGCCAAAGC CTGGGCAGAA
TTATTGAGAG TATTGTGGAG TGAGAAATAT GAGTTCTTAT CACCTATGAC TTTCCGGGTA
AGTTTACCTT GTTTTTGTTC GTGGTTTTTT GGCTAAAATC AAGACCATGT ATTAGAAACA
AATCACTCAC TTTGCTCCCC AATTCCTCGG TTCTGACCAA CATGACTCTC AAGAATTCTT
GTCATTCGTC CTTGACGGCT TACATGAGGA CCTTAACCGA GTCAAGCGCA AACCCCCCCC
TGTGGAGATG ACTCCCGAAA GAGAGGCGAT GCTGGAGAGC GCCCCACCAG AAGTGGCTTC
TGAGAGAGAA TGGGCAATCT ACCGGCAGAG GAATGATAGT TTGATTGTGG ATCTGTTCCA
GGGGCAGTAT AGGAATAGGT TGGAGTGTTT GACCTGTCAC AAGGTGAGTA TAACTTGCCC
CAAGTCCATC ATTGAAAGCT ACTGACGATT ATTGGACCAG ACATCGACAA CTTATGATGC
GTTCATGTAC ATGTCTCTGC CCGTTCCATC GGGTAAAACA AAGGTGGTTA TACAAGAACT
CATTGACGAA TTCGTCAAGG CCGAAGTGAT GGAAAAGGAG AACGCCTGGT ACGCTTCATC
TCTCCCTCTG ACACCCTCTC TGCACTGGGC TGACAGTATT CTAGGTATTG TCCTCGCTGC
AAAACCAACC GTCGTGCTTC CAAGACACTA ACCATCGCTC GTCTTCCACC TGTACTGCTC
ATCCAACTCA AACGATTCAC AACGCGAGAC GGTCTCTTCT GGGACAAGTC CGAGACACCG
GTCATCTTCC CCATCAGAGG TTTAGATCTT ACACGGTACT TGCCTGGACC TGCAGGTTCG
TCGATAGGAA GTGGAAGGCA GGTGGGGCCG GATGGAACGT TTGATCCAAG GGCTCAAGTG
GGGCCGTTCA AGTATGATTT GTATGGTGTA AGTAATCATA TGGGGACGCT CAGTTCAGGT
CATTGTGAGT TTAGCTTTTC CATATTTTTG GGGGGTCTCT GGTCTGGCAA GAAAAACGGG
TGGCTGATTC GAGGTTCAGA TACGGCTTTT GTGAAGAGTA AAGAAGGATG GAAGTATTGT
GAGGATAGTC AGGTGATGCC TGCACAGGAG AAGGACGTAA TTGTGAGCCT TTGTTCCCTA
TAATACAAAT TTCTTTCGTC GTTGTCTTTA AATTAACCAT TGCTGTTTCT CCGACTCATA
CAGTCCCGAC CAGCATATAT CTTGTAAGCA CCTATCCTTC CTTGATGCTT ACTATGGACC
GTCAACTGAC CGAGTCTGTA GGTTCTATAA GCGAGTACCT GGATAGGAGA CTTTCTAATA
GGTTTTGCGA TACAAAGTGC AAAGAAAGAG ATGAAAAGGT GGCGGTGGTA TTAAGATGTC
AGATTAATTC GTAGACTCCC AATCCCAAGA AAAACGAGTG TTGTACTATC AATTTATCAA
GTTACAAAAT TTTTCATCCT CCTTGTGCAC AAGTTGACAG AACGTATATA TATACTC
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| Protein sequence | MTRPPSPPSF TGLPLSQLLQ YASDDNGAGS HPPKVWFERA CYNADKAKLA ERKQSKEDMF
VSYSRACQSY INVAMHNDWP ETKKKDPQLA ARVKDFKPMY DSFVAKAKAL KEELRHAEAS
SPAQSKPESS KPSVSRQRSG PEITSIGNIR DRMQALAGHG MEVETIQSKR LSREAPAKAP
KPAALSSVTN SAARSRSGSE SRPLSTTTTN GRQLVVTASS KPPPTASQEK SPPSAPVNVQ
ANGSSSRSRR STLTSEGQGM SVSVGSVAAS PAQSPMPTPA AGPYRSPLPS IPSSPQPLPA
SHPPLPSPEP PRPNVPINSS DMESHPEDGL AEFERAFPSL SEFGKQWDGD SLQPDTNSND
MYHAPQYPKP PKQPPISEED DIPDLPSLPS VPTFKPGLPP PPARPDAYAF SPPATSPSVQ
TRGQTPVPRG PSPPKPDVGS GVGLHRPAST PMPNIAGLDL IDMPDGDVPQ GKAMNGGGKM
EALNSPEAVS RPPQYSDATS RPTPTTRHPL PQLPSRPPTS DAVQPTLKPK EKPKFPFSNS
ITPDELREYF LNPSVEMLFL DIRPEDEWKK GYVGREYEKR GARVEIVWLD PTVLLREGMT
ASKLEDALSL SPAVQREAFQ NRHKYDLVIV YDTRSPVWPK DGPLNRIWDI FFMGHDEKRL
QRNPVILVGG YEKWREFIKM RAARHAHTAK GKDVREGVNG YAVMRSDVVS PAPSEISVKN
ANREAPVYQA SQYAKSIAEN FGAGPQSMTG DSYRPSTHSH SQSQLYTPTY RHHHSRTGST
YSSHGAIAAP PQASIHPGPG ARRRSDYIEH TGQSYSGSAS TSPSIQSTGT TPQPQQQYYA
SPSLPASNSV TPSISSMASP RASIDYPQAH ALAKVPVPMP PPAVARPMER HDAYTSTHVH
AQSLVPTSSG YGQLPSQGQV TRSQAMRRMD TVPVGGKDKV GYWRDVVLGI TGLKNLGNTC
YMNSTIQCLS ATYPFSTFFL DGTFARSINK ENPLGTKGEL AKAWAELLRV LWSEKYEFLS
PMTFRKQITH FAPQFLGSDQ HDSQEFLSFV LDGLHEDLNR VKRKPPPVEM TPEREAMLES
APPEVASERE WAIYRQRNDS LIVDLFQGQY RNRLECLTCH KTSTTYDAFM YMSLPVPSGK
TKVVIQELID EFVKAEVMEK ENAWYCPRCK TNRRASKTLT IARLPPVLLI QLKRFTTRDG
LFWDKSETPV IFPIRGLDLT RYLPGPAGSS IGSGRQVGPD GTFDPRAQVG PFKYDLYGVS
NHMGTLSSGH YTAFVKSKEG WKYCEDSQVM PAQEKDVISR PAYILFYKRV PG
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