Gene CNA06890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA06890 
Symbol 
ID3253274 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1878961 
End bp1880619 
Gene Length1659 bp 
Protein Length326 aa 
Translation table 
GC content46% 
IMG OID638253011 
Productcell wall organization and biogenesis-related protein, putative 
Protein accessionXP_566918 
Protein GI58259011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.398405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCTTTCCGG CAGTTCATAT TATTGGCTTT GTCATTATCA AGTCACGAGC ATACAATTTG 
TATCCAGCAC GATCTCTAAA AAACTGATTC ATTGTGCGAG ATGCCTGCAA AACACGATAT
CAACGTACGC AACCATACAA GCATTGGTGG ACGGAACTAA TGCTGACTGT TTAATTTGTA
GAAAGTAGGG GTGGAGAGTT CAGACTTCCC TATATTGTGA GTCTCCTACT CTATGACGTG
CTTATCAATG TATTAACACT AATTCCTCAG ATGCGAAACC TGTAAGTTGT TGATTTGTGT
TGCTTGCCGG GAGAATATTG GCTGACAGGT AACAGGTCTT GGTCCCAACC CTTATGTTCG
AATGGTTAGC TCGTCTTATC TGTATGTACC TATAGCGCAA AAGCTTACAT CCTCATTTAG
AACAAACAAG AATTTGGACA CGAATGTAAA GTCTGCAACC GTCCCTTTAC TGTATTCCGA
TGGAATCCTG GAGAAGGTCG AATGAAGAAG ACGGAAATTT GTACGACCTG TGCCAAGATA
AAGGGTGTAT GTCAGACATG TCTTTTGGAC TTGTGAGTAT TGTCCTAAGA TTTACGATTC
AATTATAGTA GACATATTGC TGAATTTGTC ATCGCGTAGA GAGTTCGGAT TACCGACTCA
GGTTCGAGAT GCTGCTTTGG CAAGAAAGGC TCAAGCTCCT TCGTCAGATA TCAACAAGCG
TGCGTATATT CGCATTACAC CAGCAATCCC CAGCTGATTC GCCGCATAAC TATTTAGAAT
ATTATATCCA AAATCTTGAA GCTCAAATGG CCGAGTCCCC AGATGGCCTT GCTTATGATT
CTGAGGTGGC AAATCGCGCA GGCCGAGAAA TGCTCAAGAA TCTCGCTCGA ACAGATCCTT
ACTACAAGCG GAATAGGCCC CACATTTGTA GTTTCTTTGT CAAAGGAGAA TGTAAACGAG
GAGCCGAGTG CCCATTCCGG TCAGTCGACC CCAGAGTACT GTACATCACC GGATTCTTTT
AGGCTAACGG TTATTTGCAG ACACGAAATG CCAAAGGAAA ACGAGACCCA GAAACCTAGC
CAGCAGAGCC TTGTGGATAG ATATTACGGC AGGAACGATC CTGTGGCCAA AAAGATTTTG
AGTCAGAATG CGGAGAGTAA GGGCTTAAAA GCGCCAGAGG ACAAGTCAAT TGTACGCATG
TCTTGCTGCG GTTATAATGG CCTCTCAATT GCTGATACCG GTTCAGACGA CCCTGCTGTT
TTTAGGATTA CCTCAATGCA ACGACTCTCA CGTTAGGGCG TCTCTGGTTG GTGCTTGTCC
TTTCGTCAAG CCATCGGACG TGAAATCCAT CTCCATCGTT GAAGCTAGTC GTATGTCTTG
CCTATCTGAC GTCTTATCTG TCTTGCTGAC CGGTTTACCT AGATTGTGCA TTTGTCAACT
TTAACCAACG TTCTATGGCG GAACGAGCGG CAGATGCGCT TGCGGCCCAA GGAGGCATTG
AAGTGGAGGG AAAGAAGGCG AAAATTGTTT GGGGAAGGGC ACGACCGCAG AAGAAGGCAG
CTGCTGCCGT GGAAGGATCA GCAGCTCCCG CTTGAGCATG ATTTCAGCTG TTACAGCCGT
TAGGGGGAGA GGGTTGTCAG GTGCATACAC ATACAGTTT
 
Protein sequence
MPAKHDINKV GVESSDFPIL CETCLGPNPY VRMNKQEFGH ECKVCNRPFT VFRWNPGEGR 
MKKTEICTTC AKIKGVCQTC LLDLEFGLPT QVRDAALARK AQAPSSDINK QYYIQNLEAQ
MAESPDGLAY DSEVANRAGR EMLKNLARTD PYYKRNRPHI CSFFVKGECK RGAECPFRHE
MPKENETQKP SQQSLVDRYY GRNDPVAKKI LSQNAESKGL KAPEDKSITT LLFLGLPQCN
DSHVRASLVG ACPFVKPSDV KSISIVEASH CAFVNFNQRS MAERAADALA AQGGIEVEGK
KAKIVWGRAR PQKKAAAAVE GSAAPA