Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA06750 |
Symbol | |
ID | 3253218 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 1838154 |
End bp | 1843070 |
Gene Length | 4917 bp |
Protein Length | 1147 aa |
Translation table | |
GC content | 47% |
IMG OID | 638252997 |
Product | alpha-mannosidase, putative |
Protein accession | XP_566906 |
Protein GI | 58258987 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0383] Alpha-mannosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.854831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTCCGTGAGT AGCATTTTAT ACCCATCTAC TACCCATACG CACTTAATAC ACTCCGGGAA ATACATCACC ATGGGGAGCC ATAACCCTAT CACATCCCCC AAGCTGGACT ACCCTCAGAG GACCACCGAG GCTAGTAAGT AGTCGTCGAT CCTCGACTAT GTTACAAAGC GTTCGCATCC GCAGCAGGCC AGTTGCAGCC AATTGGATGC GAAAAGTGAA CCAGAGCTCT TCCTTGATTG ATATCTCCAA GGAGATTCGT TGTTCATATG ATAGTACATT AGCTTTCGTA TCAATCTCAA TTCCTGCGCG GGACTTCGCA ACTTCGGAGA ATGCGAAGGG TCTGATCGGT GGAAGCTGTT TGCAAAGACC ATCGAGCGTG AGACAATAGT CGAGGCTGAT GTATCACAGA GTACAAGCAC CTGGGGTCCA TTCGCGGTCG TCTTGATCAA TTTGTCGTAT GTTGTTTATA TTGTCTGAGT GGTTACGGGC AATGATCTGA CCTGCCGCCT GCCATGTCAG GGGGGGCACT ACGCAAGCTA TAACCTCTCC TCTCTTTTGT ATGCTCACCG CTTAGACGAC TCACAACATG TCAAGCTCGA AGTATGGTCA GCCCCCGGTC TCACCAAGCC CACTTTTGAA GAAGCCAAAC GCCAAACTTT CAAATCCACT AAGAAGGGCG AATCCTTCGG GCCAAGCTGG ACGAATCATT GGTTCAAAGT TACTCTTCAC ATCCCCAAGG AGTGGTCAGA TTACGAGAAG GTCCAATTTG AATTTGACTG TTCTGGTGAA GCCATGATAT TCACCACAGA CGGTGATCCC ATTCATGGCC TGACGGGCGG GTTTGGGGAC GACCGACGTG TTGAATTTAT CATCCCTCAA TCTGCTCGGA ATGCTGGAGT CGCCCATTAT TATATCGAGG CGAGCTGTAA CGGCATGTTC GGTATCAATA ACATGGAACC CCCTGACCCT AATAGGTACT ATCAGTTGAA TTCCGCTGAT TTGGTAGTCC CCAACGAAGA AGCATGGAAG TTGATGTGGG ATTTCAACGC AATCCACCAA GTGTACAATA CCCTCCCAGG TGATTCGGCA CTCGCCAAAA AGGCGCAATG GGTGGCCAAT GAGATAATGA ATGTGTTCGA GACGGGAAGC CTGGAGAGTG TGGCCAGGGG GCGAGAAGTG GCACAAATTG TCCTCGGTAA AGATTGGGAG AAGAATATTC AAGAGGAGAG TGAGAACGCT GGGATGGAGA AGGGCGTACT CTGGGGCATT GGACATTGGT ACATTGCTCG AGATAAACAA AACAGTCCGT GGCTGACTGG TACTTAGCCA TATCGACACT GCCTGGCTCT GGCCCTTCCA TGTGACCCAG CAGAAATCTG CTCGATCTTG GTCAACTCAG TGCGACCTTA TAGACCGTTA TCCCGAACAT CGTTTCTCCG CTACCCAAGC TCAACAATTC AAATGGGTCG AACAACTTTA TCCCTTGCTT TTCGCTAGGA TCAAGGAAAA GGTATCTGAG GGCAATTTTC AACCTCTTGG AGCGACGTGG GTTGAGATGG ATACGAACCT ACCCTCAGGT GAAGCTTTAA TAAGGCAGTT CCTGTATGGG CAGAGATATT ATGAGAGCAG GTTCGGCTTT AGGTCTGATA CGTTCGTTTT ACCTGACACT TGTGAGTCTT GAACCTTACA GCCGGCCTTC CGATCAACGT ACATCTAATA TTACATGCAG TTGGTTACTC CAGTCAACTT CCTCAAATCT CTCGACAAGC AGGAGCCAAA AATTTCTTCA CGCAGAAGCT GTCATGGAAT TCTATCAACA AGTTCCCGCA CAGTACATTC AACTGGGTAG GATTGGATGG ATCTCAGGTT TTGACGCACA TGACTCCTGT GGACAACTAC AACTCTCAGT AAGATCGATA TCCTTCAGAT TTGCTTGCTG CATAAGCTAA CATTCAAAGG TGTAATATCG ACGACATCCG ACGAGGAGTT ACTGGTCATA AAAATCTCGA TGTCACCTGT GAGCTGACCC TTGGTCGAGG AAAATGTATA CACACTAACC TCTCATAATA GCTGAAGCTC TCCTCTTGTT TGGCAACGGT GACGGTGGCG GCGGCCCTAC TCCTCCCATG CTGGAGAAAC TCCGTCGAGC TCGAGCTATC GGTCAGCACC CTGATGCAGG AGGTCAACTG CCGCTTGTCA AGATGGGCGG AAGCTTCTCC GAGTTTTTTG ATAGCGTTAG GAAGGAAACA GAGAATGGGA TCAGACTGCC TTACTGGAGG GGCGAGCTGT ACTTCGAACT ACATAGAGGA ACGTATACTA CGCATGCCTC AATTAAAAAG GGTAACAGGA AGAGTGAAAT TCTTATGAGG CAGGCAGAGT ATGCTGCGAC CATAGCCAGC CTTGTTGATA CTGATTACGA GTATCCCAAA GAGGTAGGAT TCAATCACAT ATCAGTGATC ACCGGCTAAT AACGTTAAAA TTTAGCGCTT CGATGTTGCT TGGGAAGATC TGTTACTTTG TCAGTTCCAC GATGTTTTGC CTGGAAGTGG TATCGCTATG GTATGTTGTT GTTTTTTTCT ATGAACGCAT CGGAACGCTG ACTCCCTGAA GATCTACGAA GATGCTGAAA AGAAATACGC CGCGCTCCAT TCTTCAATCA CCAGTATTTT GAATGAGGCA AACTCCATCC TCTTTAAGCA ATCAACTCCA TTAGTCCCTT CTTCTCCTAC AGAAGTCCAA GGCCAGGTAT TCGCCATAAA CACAATTCCC AATTATTCTC GTCGGGAAAT AGTTGAAGTG CATCTAGGAA AAGGGGCAAC CAGCCTTCGA CAAGTGTCTG CGCAGGTCAC AGATGACGGA AAGAAAGGAT GGTTGTTAAT GAGCACGGAA GACGATGGAG GAATGGTTGC GCTACCTAAG GGGGTTTACG CCTCGCCACG GGTGGCGAGT AAGTCACCTT TTTTGTTCAC GAACATCAAG GAGCTCATGT ACGGCGTAGT CGTCCTGGAG AAAGATGATG TAGCCGTGAT GTCGAACGAC AATATCTCTT TGCAAATCAA AGGCGGGAGA ATTACCAGTG TCTATGACAA AGCTTTGGAG TAAATCGACT TGATTTTCTT AATTGGGGGG TTGATGCTTA TCAAAAAATG ACAGGAGAGA GCTTGTCGCT CCCGGACAGA CAGGCGGCTT GGTCATCATG GAAGACCATC CCAACTTTTG GGAGTAAGTA TGACGATCGT CAGAACTAAG AAAAACGCTT ACCAATATCT GGTTGCTATG TAGCGCATGG TATGTTTCAG TGTGGACGTG CTTTTCTAAC TTGGCTTGAT GCTGATTTCC ATGCAGGGAT GTTGATGAAT TTCATTTGGA GAAACAAAAG CATCTCAAAT TTGGCCCATT GCGTGTCAAA GAGAACGGTC CACTAAGGGG CATCATTAGC ACCACCTGCC GAGTAGGGAA AAGTCTTATC CAAATCGACG TGAGTATCGT ACGATTGCAG AGATTTAGCA AAGCTTATCC TTCCAAAGAT CATTATGGAT GCCATTGCGG CTTCTGTAAA GCCCGGCGCC CGTAGCATAA TACGATTCGA CACTGTTGTG TAAGTCTCAC TCAGCCTTAT TTTGTCCAGT GAATGTTGCC TAATCGTTTA ATAGTGACTG GAAAGAGAAA CATCAATTCC TGAAGTGTAA GCATAAGCTG TCGTCGCTCA GATGTTGTTA CCTGGATCTG CGCTAATGTG ACCAATAAGT CGAGCTTCCC CTTGATATCT ACTCTGACTT TGCCACCTAT GATACGCAAT TCGGAACTGT TGCTCGGCCC ACTCACAGGA ACACCAGCTG GGATGCTGCC AAGTGAGTCG GCATTGAATT GCTAAAGAAC CCCCACTGAT CTTTCGTTCA GGTTCGAGGT CTGCGCGCAC AAGTTTGCTG ACTTATCCGA GGTAAGCCTT TCAATCTCGC TTTGACATAC AAGTCATACC TGACGACATC GTAGTATGGA TATGGCGTCG CAATCCTCAA CGACTGCAAA TATGGCTAGT AAGTACTTTC AACCTTACTT TCGGTGTAAA AATACTGTGA CTAACCTTTC CATAGCGCCA CGCAGGGTAA TGTCATGCGT CTTTCGCTTT TACGAGCCCC TACCCAGCCA GACGCAGATT GCGATATTGG AACGCATTCG TTTTCATTTG CCATTTATCC TCATAGTGGT ACTTTCATTG AAAGTGATGT GGCCCAAGTC GCCTATGCCT TCAATTCACC ATTGTCCGGT GAGCCATCAT TTCTGTCAAG CAACCGAAAC ATTCTCGCTG ACAACATTTC CAACAACTGT AGTGTGTTGT GCTCCGAAAA ACTTTTTGAC AAACGTTTCA CCATTAGCTA GATCATCTCC CTTTACACTT GAAGGAGCAG ACAATGTCAT GCTGGAGACC ATTAAACGAG GCGAGGACGA TCAATTGTCT GGAGATAAGA CCAAGACCAT CATTTTGAGG GTATACGAGC ATCTCGGTGG CCATGCTAAA GTCAAGCTCA ACGTGTGAGT CTCAAGTGGC ATTTCACTTT CGAGTTGTGT TAACGCTACT TTCAATTCGG GGTAGAAGGC ATCTGGCTGT GGTGAAGGCT GAGCTTGTCA ACATCCTGGA AGATCATCTT GAAACTCTTC GTCTCTACCC GCTGGACGAC AAAGAAAAAG CACTGTCAGA CCTCGGGAAT GAAGAGAATC CTCATTCCGG CGACAACGTT TACGTCCAGC TGAACTTGAG AGGATACGAG GTGCAGACTG TAAGACTGAC GGTAAAGGGT AAGAAAAGTA AGGCAGAGTC GGAAGGATGG ATAAAGTTGT AAAAAGGTTT TGCAGTTGCC CAAGTGTAGG TTTTGTAAAG GACGAAGAAT ATCGAACGAA TTAGGCAATT GTCTAAT
|
Protein sequence | MGSHNPITSP KLDYPQRTTE AKYKHLGSIR GRLDQFVGGH YASYNLSSLL YAHRLDDSQH VKLEVWSAPG LTKPTFEEAK RQTFKSTKKG ESFGPSWTNH WFKVTLHIPK EWSDYEKVQF EFDCSGEAMI FTTDGDPIHG LTGGFGDDRR VEFIIPQSAR NAGVAHYYIE ASCNGMFGIN NMEPPDPNRY YQLNSADLVV PNEEAWKLMW DFNAIHQVYN TLPGDSALAK KAQWVANEIM NVFETGSLES VARGREVAQI VLGKDWEKNI QEESENAGME KGVLWGIGHC HIDTAWLWPF HVTQQKSARS WSTQCDLIDR YPEHRFSATQ AQQFKWVEQL YPLLFARIKE KVSEGNFQPL GATWVEMDTN LPSGEALIRQ FLYGQRYYES RFGFRSDTFV LPDTFGYSSQ LPQISRQAGA KNFFTQKLSW NSINKFPHST FNWVGLDGSQ VLTHMTPVDN YNSQCNIDDI RRGVTGHKNL DVTSEALLLF GNGDGGGGPT PPMLEKLRRA RAIGQHPDAG GQLPLVKMGG SFSEFFDSVR KETENGIRLP YWRGELYFEL HRGTYTTHAS IKKGNRKSEI LMRQAEYAAT IASLVDTDYE YPKERFDVAW EDLLLCQFHD VLPGSGIAMI YEDAEKKYAA LHSSITSILN EANSILFKQS TPLVPSSPTE VQGQVFAINT IPNYSRREIV EVHLGKGATS LRQVSAQVTD DGKKGWLLMS TEDDGGMVAL PKGVYASPRV AIVLEKDDVA VMSNDNISLQ IKGGRITSVY DKALERELVA PGQTGGLVIM EDHPNFWDAW DVDEFHLEKQ KHLKFGPLRV KENGPLRGII STTCRVGKSL IQIDIIMDAI AASVKPGARS IIRFDTVVDW KEKHQFLKFE LPLDIYSDFA TYDTQFGTVA RPTHRNTSWD AAKFEVCAHK FADLSEYGYG VAILNDCKYG YATQGNVMRL SLLRAPTQPD ADCDIGTHSF SFAIYPHSGT FIESDVAQVA YAFNSPLSVC CAPKNFLTNV SPLARSSPFT LEGADNVMLE TIKRGEDDQL SGDKTKTIIL RVYEHLGGHA KVKLNVRHLA VVKAELVNIL EDHLETLRLY PLDDKEKALS DLGNEENPHS GDNVYVQLNL RGYEVQTVRL TVKGKKSKAE SEGWIKL
|
| |