| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA06710 |
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| Symbol | |
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| ID | 3253210 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 1828806 |
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| End bp | 1832550 |
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| Gene Length | 3745 bp |
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| Protein Length | 1012 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638252993 |
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| Product | ubiquitin-protein ligase, putative |
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| Protein accession | XP_566904 |
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| Protein GI | 58258983 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.994255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAGCCATCGT AGCTACCACC ACGTCCGACC CCTATTCTCT ACCTTCCTCG CTCGCGTTCC
CCTTCGTCTC GTCACGTCTT GCCGTCTCCG TGCACACATC CACCTTCAGT CTCTCTTCCA
CCATTAATTG AACTGGAATC AGCAAATTCG TATTTGGCTA TCTATCACCA GTAAGTGTTT
CCTAAGACAA CAAGACATGC GTCGTCATAA ATGCAGGACC GAGGACACAC CCTTTGTCTT
GAAGGGCGCT TTATTGATAA GCCTCCCTTG AACGAACTCT GTCTCTTTAG CCTCCTCCTT
TCACCCTATA TCCACCTTCG CCGTGTATTC ATAGAGACTC GCGCCAGGAG GATACCGTAC
GAAAGTAGAG AGACAAAGGA ATAGCCACCT TTATGCTTGA CCTATTCTTA ACGACTTACG
AATACAAAGA ACCAAAGAAC TGACTCATAG TCACCTTCAG GCATTTCCGT CATAATCTTT
ATCGGACCGG ATACCGCGTA CTCCTGGATT GACTAGATTC ATGCGCGATG CAGGGCACAC
CCAACACAAT GGACTATAAC GACTTGGATT CTGCAAACGG CCGTGGGCTC CCCACGGGAG
GGCTGACATG GTCCAACGAA GGACCGGTCT TGCAGATGGA AGATGCAGTG GTAGAGACAG
TGTATGTATT GTTTACGCTC TTGGTTATCA TTGGACTGAT GAGTTTGGTA GTGTTACGCA
TACAACCCGT ACAACAACAT CGTTCCAACC CATCACCCTC CCTCGAGTCC CTTCTCCAGA
GCATCTCAAA CTCCCAAATC ACCTTCCTGG CGAAAAGTAT CCTCTGGCGG ACCAGCCCGC
GCCCAGTGAC ATGCGTTTAT TTACTATGAC TCTTGGAGGA AGAAGAGTAA TCGTTCAGGA
TGAAAATGCC TCTGGAGAGA GTGGAATAGA AATGTCTGGC CCTGGGTGGA CAAGAACTCT
GTTGAACGGC AGTATGACTG AGGCTGAAAA TGGTGTCGAC GTAGCAGACG AAAGCTTGAC
TTTTCTTCAA GCCCTTAACA GGTCAAAAGG CAAAGAGAAG AAGAGGGAAT ACGAAGAGCG
AAGTGATGCT CCCGCATCCC CAGTAGCTAA CGATATTTCT GCCAGGCGAA GTCCGCCTAG
AAAGAAGATT AGAGGGCTGG ATGAGATCAA TATACCTACA GGTGTAAATC GAGCGTTATT
ATCACCATTG CCCTCCCCTG AACACGAGTC TATGTCTCTT TCCTCTATAG CCCCCACGGC
TCAAGCACCG AATATGGGCT CCGGTGTTGA GCTTTCAGCT CTATTCTCTC TCCCGTCTCT
TGTCTCCCAT TTCGACACTC TACCTGATCG TCTGCAACAA CACTTCCTCA TGCACCTCCT
TCGTCGCTCC CGTATGCCCA CTTTACAACG CATATCGAAC TTCGTATCCA CGGCTCTTCG
CCGGGATTTT ATCACCCAAC TTCCACACGA GGTCGCCATA CAGATACTCA AATCAGTTGA
TGGCAAGAGT TTAGCCAGTG CCTCCAGGGT GTGCAAAAAA TGGAAGAGAA TCATTGATAT
GGAAAGAAGT GTATGGAAGG CGCGATTATT AGACGATAAA CTCTGGAGTG GTTTCGGTAC
AGAAGAACAG GAGGAGAGTT TAGTTCTTGA GCGATACGAG GCGCTAGACC TACACGATCA
GCTCGAGGGG AGACGTACTA GCTATCAAGC AGTATCCGGC GAGGATGAGC AAATGTTTTC
GCCAACATTG GGTCATGATC TACCTGAAAG ACCCACTCCT CTCAAACATG TGTACCGTCG
TCGATATCAG GATCAAAAGA ATTGGATACA TACTCGACCA GAACATAGTT CATTTACTGG
CCAGGGTACA AACGTCGTCA CATGTCTTCA GTTTGATGAG GATAAGATTG TTTCTGCGTC
GGATGATCAT TCAATCAACA TCTACAACAC GAATGATGGT CAGCTTCGCA AGCGGCTTGA
TGGACATGAG GGCGGCGTGT GGACGCTTCA ATATAAAGGT CACACCCTTG TCAGTGGTTC
GACAGACCGG ACAGTGAGGA TATGGGACCT GGAAGATCTC CGAATGACCT ATGTGTTCGC
TGGCCACACC AGCACTGTTA GATGTCTGCA GATTGTTGAA CCGGTGTGGG AGGAGGAGAC
ACAATCCTAT CAGCCACCTG TCCCTATGAT TGTGACTGGA TCCAGAGATG CAACGCTCCG
TGTTTGGAAG CTGCCCCAGA AGGATGACCC TCTATATGAC GGTATTGTGA GTTCATCGGC
ATATCTGTTT TTTAAACATC ACTGATGAGA GGCAGGTGGA AGAGGAACAA ACTGAGCTCA
TTGGGCCTGA CGTAAACCCT TTCCACATGC ACCTTCTTGA GGGCCATTCC CTTGCTGTTC
GAGCAATTGC CACTCATGGC AGAATCTGTG TATCGGGCTC GTATGATATG AGCGTTAGAG
TATGGGACAT CGTGAAGGGG ACCAGTCTTC ATGTTCTTAC GGGGCATGAA GATAAAGGTA
AAAATCACAC ACTCGACAAG AGCATTACAG AAGTTGACAA AGCTTTAGTG TATAGCATCG
TCTACGACCC TTATCGCAAG AGATGTGCCT CGGGCTCTTT GGACAGCACC GTCAAGGTTT
GGGATATAGT CTCGGGTCAA TGTCTTCACA CTCTCCAAGG TCACACTTCT CTTGTGGGCC
TCCTCGGTTT GTCCCCTAAC TATCTCGTCT CTGCTGCTGC CGATTCCTCT CTCCGCATTT
GGGACCCCAA TACTTGCCAA CTCAAGAACG TCCTTGCTTC TCACAGTGGC GCAATCACAT
GCTTTCAGCA TGATGAGACA AAGGTCATCT CGGGCTCAGA TGGAACCCTG AAGCTCTGGG
ACGTCAAAAC AGGAACATTC GTTCGAGATC TGGTTGTGGG GATCAGCGCG GTGTGGCAGG
TCTCTTTCAA CAAAAACCTG CTGGTAGCTG CCTCAAATCG GAACGGCGCA ACTGTTTTTG
ATGTCTTCAG ATTTGGCCAG TCGAGTACAC AAGATGTAGA TGATCCCTCT CTTGACAATC
TGCAGCCACC GAGATGGGAA AGGTGGGCCG CCGAGAAGAG AAGAAGGTTG GAAATGGAAG
AGAAGAAAAA GAGGAAGAGC CGCAGTCGCA AAGCTCGTAC TGAGTCAGCC TGGGATGACA
GACTCGAAAA AGTAAGAGAC CCAAGAATGG CATCCTGGAA AACTACTTTA CCTTATGCCC
CGACGGGACA TCTTGGCTAC TCTGTCGAAG GTGAAGAACC AGACGAACGT GTAGGCCTCC
AACCTCCTCC GGCATTTGGT TTCAGGACTG GGTCTCATGC AGGATCTTCG AAAGGCAACT
CGCCGTATCA GTTAAGTTCG GCCCAGTCAG GGTCAAACAA CGTTGTGCGT CGGAGTCTTC
ACGATCTTTC GGGTAGTCCT ACGCCGACTG GTGTGGCCCG GAGACGAGCC GGGCTAATGA
TCTCCAAGGT CCCTAGAGCA GAGGGATCAA ATGGGGCTAG CGCCGCATTG CCGCCTGGCT
CGGTTGTTGG TCCCCTGGAT ATTGGGGAGT CGAGCGCTAG TACAGCTGTG GTGGAAGACA
ATTATCAGGA TGATGAGGGC GAGGAGGATG AAGAAATGGA GAATGCTGAT GAGCATTCAT
ATTGATGATA TCACGAGGTC TTAAGCAATC TTCTATACGA ATAATATACG AATACCGGCC
CGGTTGTCTG TCTTAATTTG TAGAG
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| Protein sequence | MQGTPNTMDY NDLDSANGRG LPTGGLTWSN EGPVLQMEDA VVETVVTHTT RTTTSFQPIT
LPRVPSPEHL KLPNHLPGEK YPLADQPAPS DMRLFTMTLG GRRVIVQDEN ASGESGIEMS
GPGWTRTLLN GSMTEAENGV DVADESLTFL QALNRSKGKE KKREYEERSD APASPVANDI
SARRSPPRKK IRGLDEINIP TGVNRALLSP LPSPEHESMS LSSIAPTAQA PNMGSGVELS
ALFSLPSLVS HFDTLPDRLQ QHFLMHLLRR SRMPTLQRIS NFVSTALRRD FITQLPHEVA
IQILKSVDGK SLASASRVCK KWKRIIDMER SVWKARLLDD KLWSGFGTEE QEESLVLERY
EALDLHDQLE GRRTSYQAVS GEDEQMFSPT LGHDLPERPT PLKHVYRRRY QDQKNWIHTR
PEHSSFTGQG TNVVTCLQFD EDKIVSASDD HSINIYNTND GQLRKRLDGH EGGVWTLQYK
GHTLVSGSTD RTVRIWDLED LRMTYVFAGH TSTVRCLQIV EPVWEEETQS YQPPVPMIVT
GSRDATLRVW KLPQKDDPLY DGIVEEEQTE LIGPDVNPFH MHLLEGHSLA VRAIATHGRI
CVSGSYDMSV RVWDIVKGTS LHVLTGHEDK GKNHTLDKSI TEVDKALVYS IVYDPYRKRC
ASGSLDSTVK VWDIVSGQCL HTLQGHTSLV GLLGLSPNYL VSAAADSSLR IWDPNTCQLK
NVLASHSGAI TCFQHDETKV ISGSDGTLKL WDVKTGTFVR DLVVGISAVW QVSFNKNLLV
AASNRNGATV FDVFRFGQSS TQDVDDPSLD NLQPPRWERW AAEKRRRLEM EEKKKRKSRS
RKARTESAWD DRLEKVRDPR MASWKTTLPY APTGHLGYSV EGEEPDERVG LQPPPAFGFR
TGSHAGSSKG NSPYQLSSAQ SGSNNVVRRS LHDLSGSPTP TGVARRRAGL MISKVPRAEG
SNGASAALPP GSVVGPLDIG ESSASTAVVE DNYQDDEGEE DEEMENADEH SY
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