| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA06640 |
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| Symbol | |
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| ID | 3253868 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 1810392 |
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| End bp | 1812909 |
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| Gene Length | 2518 bp |
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| Protein Length | 738 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638252985 |
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| Product | Pre-mRNA splicing factor RNA helicase PRP28, putative |
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| Protein accession | XP_567003 |
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| Protein GI | 58259181 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.847821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTGGAAAG TCTTAGCGTA AGACATACTA TTGAGTCAAA ATGGCAGGTC CGCTTTCAGT
TGAAGATATG TTGGCAAAGC AAAAGGCCGA GAAAGAAGCC GCTGCCAAGG TATGCTCAGT
CGTCTTGCAA CTCTCTCACA ACTGCTGCTA ATGTCCGATC GACTCTGTAG CCCAAGTTTT
TGAGCAAAGC AGAACGACAA AAGATTGCTT TGGAAAAGCG TCAATCTGAG GTTCGCGAAC
AGCAAGAACG TGAAGATGCC GAACGTCGCC AGCGAGAGGA ATTTGATCGT GCTGCCGAAG
AAGAGAGGCG ACGCCATGAG CAAGAGAGAT ATGGCTACAA TGCCGGACCC AGTGGTAGGA
ATGATCGTGA TGGATATGGG AGGGATGGGT ACGGCCGTGA CAACAGGAGA GGCTTTGGAG
ACCGCCGAGA TGGATCTGGA CCTGCTATCC CTTCTGGGCC TCGCGGTGCC GCCCTTCCTG
TGGGACCAAG GAGTATGCAA AGTAGAAACG GTGGCGGACT TCCTTACGAC GGATTTGCGC
AAGGTTCTCC CAGTCAGTTG TCTTCCACAC CTGTTGCTGG TTCTGCCTCT CCTGGACCTG
CCTCTACTAC AGCTTCGGGA GACGCTGTTC CCCCTTCTCA GGCAGAACTT GAAGCTCTCC
GTGCTCGCTA TCTCGGAAAG AGGACAGATG GGAAGAAGCC GCGTCTGAGA AAGGCTCAAG
ACAAGAAAAT CATATTCGAT TGGAACGAGC AAGATGATAC GAGTGCTGCA GACCAGAGTT
CATGGACCAG GGAAGTGCGA GAGTTGGTTC CGGGAGGCAC GATGTTTGGT GGACGTTTAG
CAGGGATGGA TGGAGCCAAG AAGAATGAGA CTCGAAGTGA CAAGTGAGTT TTTTTTTAAA
GGACTTTGAG AAGTCGTTCT AATTTTGTAT AGCCATGCGG ACCCGCTGGA GCGTCGTCGC
GCTGTCAAGG GCAAGGATGA TGATCGCCAC TGGTCTGACA AGCCCCTCGA TGAGATGAAG
GAACGAGATT GGCGTATCTT CCGTGAAGAC TTTAGTATTG CTGCTAGAGG TGGTGGGATC
CCTCATCCTT TAAGGAACTG GAGAGAATCG GCCATTCCGA GTCAAATTTT GGATATCATC
GAAGAGATCG GTTACAAGGA GCCCAGTCCT ATCCAAAGGC AAGCAATCCC TATTGGAATG
CAAAATCGCG ACCTAATCGG TGTCGCCAAA ACTGGTTTGT CTACCATTTA TGCGTATTTC
GCCTGGTGCT AACAATAGTT TTGTAGGTTC TGGTAAGACC GCCGCCTTCG TCATCCCTAT
GCTCGATTAC ATCGGTCATC TCCCCCCTCT TAACGATGAC AATCGCCATC TTGGCCCTTA
TGCCCTTATC ATGGCGCCTA CTCGAGAACT TGCCCAACAA ATAGAGACTG AAACTCGTAG
ATTTGCCCTT CCTCTGGGAT ACAAGTGTGT CTCAATTGTC GGTGGTCGAT CTGTCGAAGA
ACAACAATTT GCTCTGCGTG ACGGCGCCGA AATCATCATC GCTACCCCCG GCCGACTGAA
GGATATGGTT GACAAGAGCA TACTCGTCAT GAGCCAATGT AGATACGTCG TCATGGACGA
AGCTGACCGC ATGGTCGACC TTGGTTTCGA AGTCGATCTC AACTTCATCC TTGACTCGAT
GCCTGCTACA TTTGTCAAGC CCGACGACTC AGTTGCGCTC CAGCCGACAA AAGAAGGTGA
ATGGCAAGGA TGGCGAGTTA CGACTCTTTT CTCTGCTACT ATGCCCCCGG CCGTTGAGCG
TCTTGCGCGA AAGTATTTGA TCAAGCCTGC GACTGTCGTT ATTGGTAATG CTGGTGAAGC
TGTTGATACC GTTGAGCAGA GGGTCGAGTT TGTGCACGGT GACGAGAAAA AGAAAGCTAG
ACTTATTGAA ATCCTCCGTA CTATCGGCTT GCCACCTCCT ATCATCGTTT TTGTCAATCA
GAAGAAGACG GCAGATATGG TGGTCAAGTA CGTTCAGCAG GCAGGCATGT CAGGTGTCAC
CCTCCATTCC GGCAAGTCTC AAGAACAACG AGAAGCTGCG CTGCAAGCTT TGCGCGATGG
CGAAATCTCT GTTCTAGTTG CTACCGATCT TGCTGGTCGA GGTATTGATG TCCCTGACGT
TTCACTCGTC ATCAACTGGC AGATGAGCGA CACGATTGAA AAGTATGTCC ATCGTATTGG
TCGTACGGGT CGTGCCGGTA AGACCGGTGT GGCGATCACG TTCTTGACGA ATGATGATGA
CGAGGTCATG TACGACTTGA GAATAGAAGT GGAGAAGAGT AAGATGAGCA AGATGAATCC
CGAGTTGGCG CGGCATGAGG CAGCGAGGAC GAGAGTGACT AGGGAGATGA AGGTGGGTTT
ATTCCCTGCC TTGACAGAGC GTTGGCTAAT GATTTATATA GAGAAAGAGA GGCGATGAAG
AAGAGTGATT GGAAAGACCT TAATAACGCG CTAGTATGAA AGCTTGTCAT CCTGTAAT
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| Protein sequence | MAGPLSVEDM LAKQKAEKEA AAKPKFLSKA ERQKIALEKR QSEVREQQER EDAERRQREE
FDRAAEEERR RHEQERYGYN AGPSGRNDRD GYGRDGYGRD NRRGFGDRRD GSGPAIPSGP
RGAALPVGPR SMQSRNGGGL PYDGFAQGSP SQLSSTPVAG SASPGPASTT ASGDAVPPSQ
AELEALRARY LGKRTDGKKP RLRKAQDKKI IFDWNEQDDT SAADQSSWTR EVRELVPGGT
MFGGRLAGMD GAKKNETRSD NHADPLERRR AVKGKDDDRH WSDKPLDEMK ERDWRIFRED
FSIAARGGGI PHPLRNWRES AIPSQILDII EEIGYKEPSP IQRQAIPIGM QNRDLIGVAK
TGSGKTAAFV IPMLDYIGHL PPLNDDNRHL GPYALIMAPT RELAQQIETE TRRFALPLGY
KCVSIVGGRS VEEQQFALRD GAEIIIATPG RLKDMVDKSI LVMSQCRYVV MDEADRMVDL
GFEVDLNFIL DSMPATFVKP DDSVALQPTK EGEWQGWRVT TLFSATMPPA VERLARKYLI
KPATVVIGNA GEAVDTVEQR VEFVHGDEKK KARLIEILRT IGLPPPIIVF VNQKKTADMV
VKYVQQAGMS GVTLHSGKSQ EQREAALQAL RDGEISVLVA TDLAGRGIDV PDVSLVINWQ
MSDTIEKYVH RIGRTGRAGK TGVAITFLTN DDDEVMYDLR IEVEKSKMSK MNPELARHEA
ARTRVTREMK RKRGDEEE
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