Gene CNA06550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA06550 
Symbol 
ID3253932 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp1779587 
End bp1780300 
Gene Length714 bp 
Protein Length165 aa 
Translation table 
GC content47% 
IMG OID638252976 
Productconserved hypothetical protein 
Protein accessionXP_566995 
Protein GI58259165 
COG category[V] Defense mechanisms 
COG ID[COG3440] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0982695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCGT CAGCCGATGC TGTACATGCG TAAGTATGTC TAGTATCTAC TAGTAGGGAT 
TGCATTAATA TCTTCCAGAC CCACGGTTGC AGGTATATCT GGTAATGCTA ACGATGGTGC 
TTGGTCCGTG GCTCTCTCGG GTGGCTATCC AGATGAGTGC GTCGGACATG GCTTTTTGCA 
GCAACGCAGA CACTGAACCT AATGATGATT AGTATTGACT TAGGTTACGC TTTCACCTAC 
ACCGGCTGTG GAGGCCGAGA TTTGAAAGGG ACTAAACAAA ATCCAAAGAA TCTTCGGACT 
GCACCTCAGA CTTCTCATCA GAGTTTCGAT AATCCTTTAA ACGCTGCTTT GAAGGTCGGT 
CTTTGAGCAG GCATAACACA AAGAAAAGCC ATTTTTACTG ACTTTGCATT TCACTGTTGT 
CGTGTATTTG CACTCTATCA TCTTATACAT TTGTCATTCA TGTAGCGTTC CGCTGAAACA 
CGAAACCCTG TCCGGGTCAT CCGCGGGTTT AAGCTTCAGT CCAAATACGC ACCGCCAACA 
GGATACAGAT ACGACGGTCT GTACGTTGTG GAAAAAGCAT GGATGGCGAA GGGTCTTACC 
AATGGTCTGA TGGTCTGTCG TTACGCCTTC AAAAGAATGG ACGACCAGGA ACCTCTGCCT 
GAAAGAGATC TCGATCACGA CGATGATAAT GATAAAGCCC GACCGTCGGA GTAG
 
Protein sequence
MEASADAVHA PTVAGISGNA NDGAWSVALS GGYPDDIDLG YAFTYTGCGG RDLKGTKQNP 
KNLRTAPQTS HQSFDNPLNA ALKRSAETRN PVRVIRGFKL QSKYAPPTGY RYDGLYVVEK 
AWMAKGLTNG LMVCRYAFKR MDDQEPLPER DLDHDDDNDK ARPSE