Gene CNA06540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA06540 
Symbol 
ID3253940 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp1776079 
End bp1776801 
Gene Length723 bp 
Protein Length184 aa 
Translation table 
GC content47% 
IMG OID638252975 
Productvps28 protein, putative 
Protein accessionXP_566994 
Protein GI58259163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACC TCGACGAAGA AGTCCGGCTA TGGACAACAA ATGCAGAGCG TGAGAAAACA 
GAGAATCTTG CCACACTGTA TAGCATCATC GTAAGCTTGG AGTATCTCGA GCGGGCGTAC 
GTGCGTGACT CTGTTTCAGG TAAAGAGTAA GTCGGGAGTT TGCTTCATTC GATAAGTGAT 
AGCTAAATTC GTCGTGTCTG ATAGGTATGC CCCAGCCTGC CTCAAGCTCC TCGCTCAGTA 
TAAAAGTTTG ATGAAGTTGG TGGCAGACGA TATTGGAGGA GTTGAGGCGT TCATGAAACG 
CTTCAAGGTA AATACAATGA GGATCTGGAT CGATTCACAC CGCTCATGCG TTCTCTCTCC 
CATCCTCTCA CTAGATGGAC CATCCTGCAG CTCTGCATCG CTTGACAGTT GGCGTTCCAG 
CTACTGTCGA GCATTCTGCT GAGGCTGAAG ACGGGGGAGC TGAAAAGGGC AAATGGGTTG 
CTGAGACAAC ACAAGCAAGT CTTTGTTGAC TTTCTTCAGT GCAGCCTACT GATCATAACC 
GAACAGTCAT TTATCACTTT CATGGATGCT CTTAAACTTA ATCTCAAAGC AAAAGACCAA 
CTCCATCCGT TTTTGACAGA ACTAATGAGT GGATATTCAC GGTTCAAAGG GAGCCAAGAA 
TGGGAAGGTA GAGGGAAAAT ATTGCACTGG TATGTGCTTG TCAGCTGCTA CGTTCCAAGC 
TGA
 
Protein sequence
MMNLDEEVRL WTTNAEREKT ENLATLYSII VSLEYLERAY VRDSVSGKEY APACLKLLAQ 
YKSLMKLVAD DIGGVEAFMK RFKMDHPAAL HRLTVGVPAT VEHSAEAEDG GAEKGKWCSL 
LIITEQSFIT FMDALKLNLK AKDQLHPFLT ELMSGYSRFK GSQEWEGRGK ILHWYVLVSC 
YVPS