| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA06290 |
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| Symbol | |
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| ID | 3253761 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 1707147 |
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| End bp | 1709769 |
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| Gene Length | 2623 bp |
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| Protein Length | 715 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 638252950 |
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| Product | tryptophan synthase, putative |
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| Protein accession | XP_566976 |
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| Protein GI | 58259127 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain
[COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit
[TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.524376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCCACATCCA GCACAATGGC AGAGCAGCTC AAGCAAGTAT ACGCAGACAA AAAGGCCCAG
GTAAGCTCCA TCTCCTCATA CAACTTTCGC CGCTGACACC CTGCAGGACC AGGCGTACGT
CCACACCGCC CGCTCACCCA CCTACTGACA TCCCCTCAGC GCCTTTGTCA CCTTTTTGAC
AGCTGGTTTC CCTACCCGCG ATGCCACAGT GCCCCTCATG CTCGCCCTAG AGGCAGGCGG
TGCTGACATT ATCGAACTCG GTGTCCCATT CAGTGACCCA GTCGCCGACG GTCCGGTCAT
CCAAAAGGCC AACAACGTAC GTCTTTATAG TGTTATAAAA CGGCCTCTGA CGAACCCACA
GGTTGCCATT GAAAACAATG TCCACTACTC TGACTGTATC GAGTACGTCC GACAGGCTCG
TGCCCAAGGT CTCAAGGCTC CCGTCTTGTT CATGGGTTCG TAAAACTGCC TTGATAGTCG
TCTTTTCCAA CTAACAGCCA TTCACCCCAG GCTACTACAA CCCCATCATC GCTTATGGCG
AGGAAAGAGC TGTCAAGGAC GCTCGAGAGG CCGGTGCCAA CGGCTACATC GTCGTCGACT
TGCCCCCCAC CGAAGCCGTC GACTTTAGAA ATACTTGTAC CAAGGCGGGC ATGTCGTACA
TTCCCCTCGT CGCCCCTTCT ACCAGCATCG ATCGAGTCAA GTTCTTGACT TCTATCGCCG
ATTCTTTCAT CTATGTCGTC TCCAAGGTAC GCTCGACCCC GACACCGTGA TAGACTGAGC
TGACTTTTGT TCTTTCTCGT AGATGGGTGT CACCGGTTCC TCTTCTTCCG AAAACATCTC
AGCCTCCCTC CCCGAACTTG TCAAGCGTAT CCGAACGTTC ACCACGATCC CCCTCGCTGT
CGGTTTTGGT ATCGACAACC GTACCCACTT TGACTATGTC ACATCTTCCG GTGCTGATGC
TGTTGTCGTT GGATCCAAAA TCATCAAGCT CATCTTTGAG CACGCCGACG ACGGTCTTGC
ACCCAAGGTC GTCGAAGACT ATTGCCGAGA AATCACACTC AAGGGCCAGA ACCCTCCCCC
TCTTGGCCGA AAGAATGCTG CTGCCCCGCC TCCTGCCAAT GGAGGTGACG TCTCTCCCCC
CCTCCCCATT CCCTCTGGCT CACCTCTCGG CGAGTCCCAA GTCAAGGTCA CCGCCGCCGG
TAAACTCCCT TCTCGATTCG GTCTTTTCGG TGGCGCCTAT GTCGCCGAAT CCCTTGTCGA
CTGTTTAAAC GAGCTCGAAG CTGCGTATGC CGAGGCCAAG GAGGATCCTG CGTTCTGGAA
AGAGTTTGAG GATATGTTTG GGTACATCAA CCGACCTAGT GAACTTTACC TTGCCGAGAG
GTTGACCGAG GAGATGGGCG GTGCGAGGAT CTGGCTCAAG AGGGAAGATC TCAACCATAC
TGGTTCTCAC AAGATTAACA ATGCCGTTGG CCAAATTCTC CTCGCCAAGC GATTGGGTAA
GCGAAGAATT ATCGCCGAGA CGGGTGCCGG TCAGCACGGT GTCGCTACCG CCACCGTCTG
CGCCAAGTTT GGCATGGAGT GTGACATTTT CATGGGTGCT GAGGATGTGA GGAGGCAAGA
GCTGAACGTC TTCAGGATCA AGATGCTTGG TGGTCGAGTT ATCCCCGTTA CCGCCGGTTC
CCAGACCTTG AAGGACGCTG TCAACGAGGC TATGAGAGAT TGGGTCACTC GATTGGACTC
TACTCATTAT CTTATCGGCT CCGCTATCGG TCCCCACCCG TTCCCCACCA TCGTCCGTGA
CTTCCAGAGG GTTATCGGTC GAGAGATCAA GTCTCAGATG CACGAAAAGA TGGGCAAGTT
GCCCGATGCT GTCGTTGCCT GTGTCGGTGG TGGCTCTAAT GCGATCGGTA CTTTTTACGA
CTTTATCGAG GATCCGAGTG TAAGACTGGT CGGTGTCGAA GCTGGTGGTC ATGGCAAGTT
GTTCTTTTAT CTTTATATAT GTTACTCTGC TAACAATCTC TCTAGGTATT GACACCGAGG
CACACTCTGC TACGCTGACC AAGGGTGTCA TGGGTGTCGT CCACGGCGCC GCTTCTTACA
TTATCCAATC AAAGGAAGGC CAGCTCACCC CCACGCACTC CATCTCTGCC GGTCTCGACT
ACAACTCTGT CGGTCCCGAG CACTCTCACC TCAAGTATAG CGGTCGAGCG GAATATGTCG
TGGCGGACGA TTTGCAGTGT CTCAAGGCGT TCAAGATGTG TACCGAATTG GAAGGTATTA
TTCCCGCTTT GGAGAGCAGT CATGGTTTGT GGGGCGGTAT GCAGTTGGCC AAGAGTTTGC
CCAAGGATAA GGATATCGTC ATGTGAGTGC TTTTTTTTTG TTGCACTTTT GCACTTGTAA
AAAGTTGCAG TGGTTTGGAC GCGACTGACA TTTATGGTAT GAAATCAGCT GTTTGAGTGG
AAACGGTGCC AAAGACGTTG CAGAGGTGTT GTTGACGTTG AAGAACAAGG AGTGGGCGGA
CAAGCTTGAT TGGCACGTTG CGCAGTAGAG CTGCATGTAG TATACGCTAT CGTAGATATT
CTCAAAATGG GGGCATTCAG TATGCATTTG TGCAGTGTTC TTC
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| Protein sequence | MAEQLKQVYA DKKAQDQAAF VTFLTAGFPT RDATVPLMLA LEAGGADIIE LGVPFSDPVA
DGPVIQKANN VAIENNVHYS DCIEYVRQAR AQGLKAPVLF MGYYNPIIAY GEERAVKDAR
EAGANGYIVV DLPPTEAVDF RNTCTKAGMS YIPLVAPSTS IDRVKFLTSI ADSFIYVVSK
MGVTGSSSSE NISASLPELV KRIRTFTTIP LAVGFGIDNR THFDYVTSSG ADAVVVGSKI
IKLIFEHADD GLAPKVVEDY CREITLKGQN PPPLGRKNAA APPPANGGDV SPPLPIPSGS
PLGESQVKVT AAGKLPSRFG LFGGAYVAES LVDCLNELEA AYAEAKEDPA FWKEFEDMFG
YINRPSELYL AERLTEEMGG ARIWLKREDL NHTGSHKINN AVGQILLAKR LGKRRIIAET
GAGQHGVATA TVCAKFGMEC DIFMGAEDVR RQELNVFRIK MLGGRVIPVT AGSQTLKDAV
NEAMRDWVTR LDSTHYLIGS AIGPHPFPTI VRDFQRVIGR EIKSQMHEKM GKLPDAVVAC
VGGGSNAIGT FYDFIEDPSV RLVGVEAGGH GIDTEAHSAT LTKGVMGVVH GAASYIIQSK
EGQLTPTHSI SAGLDYNSVG PEHSHLKYSG RAEYVVADDL QCLKAFKMCT ELEGIIPALE
SSHGLWGGMQ LAKSLPKDKD IVICLSGNGA KDVAEVLLTL KNKEWADKLD WHVAQ
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